RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 DYNLRB2Q8TF09 96 aa12.44□□□□□ -0.42
TTC3-209ENST00000438055 VCX2Q9H322 139 aa12.44□□□□□ -0.42
TTC3-209ENST00000438055 IGHV3OR16-12A0A075B7B8 117 aa12.44□□□□□ -0.42
TTC3-209ENST00000438055 APRG1Q8IVJ8 170 aa12.44□□□□□ -0.42
TTC3-209ENST00000438055 TMEM141Q96I45 108 aa12.44□□□□□ -0.42
TTC3-209ENST00000438055 VPREB3Q9UKI3 123 aa12.44□□□□□ -0.42
TTC3-209ENST00000438055 TSHBP01222 138 aa12.43□□□□□ -0.42
TTC3-209ENST00000438055 TRPT1Q86TN4 253 aaKnown RBP12.43□□□□□ -0.42
TTC3-209ENST00000438055 BRI3O95415 125 aa12.43□□□□□ -0.42
TTC3-209ENST00000438055 CRYGDP07320 174 aa12.43□□□□□ -0.42
TTC3-209ENST00000438055 RNASE13Q5GAN3 156 aaKnown RBP12.43□□□□□ -0.42
TTC3-209ENST00000438055 PRRC2AP48634 2157 aaKnown RBP12.43□□□□□ -0.42
TTC3-209ENST00000438055 TRGV11A0A075B6L2 103 aa12.42□□□□□ -0.42
TTC3-209ENST00000438055 P0DMU3 169 aa12.42□□□□□ -0.42
TTC3-209ENST00000438055 FAM231AP0DMU4 169 aa12.42□□□□□ -0.42
TTC3-209ENST00000438055 FAM231CP0DMU5 169 aa12.42□□□□□ -0.42
TTC3-209ENST00000438055 C18orf65Q6ZTR6 163 aa12.42□□□□□ -0.42
TTC3-209ENST00000438055 IGIPA6NJ69 53 aa12.42□□□□□ -0.42
TTC3-209ENST00000438055 GTSF1LQ9H1H1 148 aa12.42□□□□□ -0.42
TTC3-209ENST00000438055 TNFRSF18Q9Y5U5 241 aa12.42□□□□□ -0.42
TTC3-209ENST00000438055 TRAV2A0A0B4J234 112 aa12.41□□□□□ -0.42
TTC3-209ENST00000438055 Q1RN00 199 aa12.41□□□□□ -0.42
TTC3-209ENST00000438055 MTORP42345 2549 aa12.41□□□□□ -0.42
TTC3-209ENST00000438055 J3QQQ9 107 aa12.41□□□□□ -0.42
TTC3-209ENST00000438055 M0QY20 66 aa12.41□□□□□ -0.42
TTC3-209ENST00000438055 NXPH4O95158 308 aa12.41□□□□□ -0.42
TTC3-209ENST00000438055 CD28P10747 220 aa12.41□□□□□ -0.42
TTC3-209ENST00000438055 JMJD1CQ15652 2540 aa12.4□□□□□ -0.42
TTC3-209ENST00000438055 IGLV4-69A0A075B6H9 119 aa12.4□□□□□ -0.42
TTC3-209ENST00000438055 F8W1H4 67 aa12.4□□□□□ -0.42
TTC3-209ENST00000438055 TIMM17AQ99595 171 aa12.4□□□□□ -0.42
TTC3-209ENST00000438055 PRSS2P07478 247 aa12.4□□□□□ -0.42
TTC3-209ENST00000438055 ELANEP08246 267 aa12.4□□□□□ -0.42
TTC3-209ENST00000438055 ZNRF2Q8NHG8 242 aa12.4□□□□□ -0.42
TTC3-209ENST00000438055 LINC01587Q99440 93 aa12.4□□□□□ -0.42
TTC3-209ENST00000438055 SPXQ9BT56 116 aa12.4□□□□□ -0.42
TTC3-209ENST00000438055 A0A0J9YXV3 536 aa12.39□□□□□ -0.43
TTC3-209ENST00000438055 I3L3M4 83 aa12.39□□□□□ -0.43
TTC3-209ENST00000438055 LGALS9O00182 355 aa12.39□□□□□ -0.43
TTC3-209ENST00000438055 PROK1P58294 105 aa12.39□□□□□ -0.43
TTC3-209ENST00000438055 C9orf85Q96MD7 179 aa12.39□□□□□ -0.43
TTC3-209ENST00000438055 TRBV27A0A0K0K1C4 114 aa12.39□□□□□ -0.43
TTC3-209ENST00000438055 ADARB2-AS1A8MUL3 147 aa12.39□□□□□ -0.43
TTC3-209ENST00000438055 TSSC4Q9Y5U2 329 aaPredicted RBP12.39□□□□□ -0.43
TTC3-209ENST00000438055 A0A1W2PRX2 142 aa12.38□□□□□ -0.43
TTC3-209ENST00000438055 SMAGPQ0VAQ4 97 aa12.38□□□□□ -0.43
TTC3-209ENST00000438055 RAX2Q96IS3 184 aa12.38□□□□□ -0.43
TTC3-209ENST00000438055 CEMP1Q6PRD7 247 aaPredicted RBP12.38□□□□□ -0.43
TTC3-209ENST00000438055 TSPEAR-AS2P59090 65 aa12.38□□□□□ -0.43
TTC3-209ENST00000438055 UBE2E2Q96LR5 201 aa12.37□□□□□ -0.43
TTC3-209ENST00000438055 IGHV3-38A0A0C4DH36 116 aa12.37□□□□□ -0.43
TTC3-209ENST00000438055 DLX4Q92988 240 aaPredicted RBP12.37□□□□□ -0.43
TTC3-209ENST00000438055 A0A0J9YY99 117 aa12.37□□□□□ -0.43
TTC3-209ENST00000438055 ACANP16112 2415 aa12.37□□□□□ -0.43
TTC3-209ENST00000438055 J3QLI3 93 aa12.36□□□□□ -0.43
TTC3-209ENST00000438055 MORN3Q6PF18 240 aaPredicted RBP12.36□□□□□ -0.43
TTC3-209ENST00000438055 TMEM61Q8N0U2 210 aa12.36□□□□□ -0.43
TTC3-209ENST00000438055 C20orf203Q8NBC4 194 aa12.36□□□□□ -0.43
TTC3-209ENST00000438055 CSMD2Q7Z408 3487 aa12.35□□□□□ -0.43
TTC3-209ENST00000438055 LYRM7Q5U5X0 104 aa12.35□□□□□ -0.43
TTC3-209ENST00000438055 RHOHQ15669 191 aa12.35□□□□□ -0.43
TTC3-209ENST00000438055 DGAT2L7PQ6IED9 249 aa12.35□□□□□ -0.43
TTC3-209ENST00000438055 ZNF702PQ9H963 129 aa12.35□□□□□ -0.43
TTC3-209ENST00000438055 RPL32P62910 135 aaKnown RBP12.35□□□□□ -0.43
TTC3-209ENST00000438055 Q5PR19 223 aa12.35□□□□□ -0.43
TTC3-209ENST00000438055 ODF3Q96PU9 254 aa12.35□□□□□ -0.43
TTC3-209ENST00000438055 SPANXB1Q9NS25 103 aaPredicted RBP12.35□□□□□ -0.43
TTC3-209ENST00000438055 TEX15Q9BXT5 2789 aa12.34□□□□□ -0.43
TTC3-209ENST00000438055 TRBV6-5A0A0K0K1A5 114 aa12.34□□□□□ -0.43
TTC3-209ENST00000438055 TSPAN13O95857 204 aa12.34□□□□□ -0.43
TTC3-209ENST00000438055 NOTCH2Q04721 2471 aa12.34□□□□□ -0.43
TTC3-209ENST00000438055 NPC2P61916 151 aa12.34□□□□□ -0.43
TTC3-209ENST00000438055 XCL2Q9UBD3 114 aa12.34□□□□□ -0.43
TTC3-209ENST00000438055 PEMTQ9UBM1 199 aa12.34□□□□□ -0.43
TTC3-209ENST00000438055 KRTAP10-9P60411 292 aa12.33□□□□□ -0.44
TTC3-209ENST00000438055 TMEM89A2RUT3 159 aa12.33□□□□□ -0.44
TTC3-209ENST00000438055 LINC01619G3V211 115 aa12.33□□□□□ -0.44
TTC3-209ENST00000438055 INSL3P51460 131 aa12.33□□□□□ -0.44
TTC3-209ENST00000438055 POM121L12Q8N7R1 296 aa12.33□□□□□ -0.44
TTC3-209ENST00000438055 RBMY1A1P0DJD3 496 aaKnown RBP12.32□□□□□ -0.44
TTC3-209ENST00000438055 RBMY1CP0DJD4 496 aa12.32□□□□□ -0.44
TTC3-209ENST00000438055 RBMY1FQ15415 496 aaKnown RBP12.32□□□□□ -0.44
TTC3-209ENST00000438055 Q6YL49 198 aa12.32□□□□□ -0.44
TTC3-209ENST00000438055 PTH2Q96A98 100 aa12.32□□□□□ -0.44
TTC3-209ENST00000438055 Q96MF0 132 aa12.32□□□□□ -0.44
TTC3-209ENST00000438055 SIGMAR1Q99720 223 aa12.32□□□□□ -0.44
TTC3-209ENST00000438055 SPAG8Q99932 426 aaPredicted RBP12.32□□□□□ -0.44
TTC3-209ENST00000438055 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.32□□□□□ -0.44
TTC3-209ENST00000438055 IGKV2-29A2NJV5 120 aaPredicted RBP12.32□□□□□ -0.44
TTC3-209ENST00000438055 NDUFA11Q86Y39 141 aa12.32□□□□□ -0.44
TTC3-209ENST00000438055 ZNF580Q9UK33 172 aa12.32□□□□□ -0.44
TTC3-209ENST00000438055 A4D1N5 150 aa12.31□□□□□ -0.44
TTC3-209ENST00000438055 IGHV4-31P0DP07 118 aa12.31□□□□□ -0.44
TTC3-209ENST00000438055 ZNF415Q09FC8 603 aa12.31□□□□□ -0.44
TTC3-209ENST00000438055 IGLV4-3A0A075B6K6 122 aa12.31□□□□□ -0.44
TTC3-209ENST00000438055 GAGE12HA6NDE8 117 aa12.31□□□□□ -0.44
TTC3-209ENST00000438055 TIMM21Q9BVV7 248 aa12.31□□□□□ -0.44
TTC3-209ENST00000438055 TRAV8-3A0A0A6YYJ7 113 aa12.3□□□□□ -0.44
TTC3-209ENST00000438055 H3BMM0 161 aa12.3□□□□□ -0.44
TTC3-209ENST00000438055 AZU1P20160 251 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 1222.7 ms