RNA–Protein interactions for RNA: ENST00000435527.6

CLOCK-203, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-203ENST00000435527 ERVFC1-1P60608 527 aa12.13□□□□□ -0.47
CLOCK-203ENST00000435527 DAZ4Q86SG3 579 aaKnown RBP12.13□□□□□ -0.47
CLOCK-203ENST00000435527 NIT1Q86X76 327 aa12.13□□□□□ -0.47
CLOCK-203ENST00000435527 SMIM7Q9BQ49 75 aa12.13□□□□□ -0.47
CLOCK-203ENST00000435527 DAZ3Q9NR90 486 aaKnown RBP12.13□□□□□ -0.47
CLOCK-203ENST00000435527 TRGC1P0CF51 173 aa12.12□□□□□ -0.47
CLOCK-203ENST00000435527 LAGE3Q14657 143 aa12.12□□□□□ -0.47
CLOCK-203ENST00000435527 LINC01551Q86U37 167 aa12.12□□□□□ -0.47
CLOCK-203ENST00000435527 PGPEP1Q9NXJ5 209 aa12.12□□□□□ -0.47
CLOCK-203ENST00000435527 TRBV6-8A0A0A6YYG3 113 aa12.11□□□□□ -0.47
CLOCK-203ENST00000435527 ZNF727A8MUV8 499 aa12.11□□□□□ -0.47
CLOCK-203ENST00000435527 C9JQL5 133 aa12.11□□□□□ -0.47
CLOCK-203ENST00000435527 MGPP08493 103 aa12.11□□□□□ -0.47
CLOCK-203ENST00000435527 FOXA3P55318 350 aaPredicted RBP12.11□□□□□ -0.47
CLOCK-203ENST00000435527 SUMO4Q6EEV6 95 aa12.11□□□□□ -0.47
CLOCK-203ENST00000435527 DPH3P1Q9H4G8 78 aa12.11□□□□□ -0.47
CLOCK-203ENST00000435527 Q9HAA7 133 aa12.11□□□□□ -0.47
CLOCK-203ENST00000435527 LRCOL1A6NCL2 159 aa12.1□□□□□ -0.47
CLOCK-203ENST00000435527 A8MWL6 223 aa12.1□□□□□ -0.47
CLOCK-203ENST00000435527 EREGO14944 169 aa12.1□□□□□ -0.47
CLOCK-203ENST00000435527 TWIST1Q15672 202 aa12.1□□□□□ -0.47
CLOCK-203ENST00000435527 NTM-AS1Q6ZSK4 140 aa12.1□□□□□ -0.47
CLOCK-203ENST00000435527 DNAJC30Q96LL9 226 aa12.1□□□□□ -0.47
CLOCK-203ENST00000435527 SRSF3P84103 164 aaKnown RBP12.09□□□□□ -0.47
CLOCK-203ENST00000435527 CT83Q5H943 113 aa12.09□□□□□ -0.47
CLOCK-203ENST00000435527 H7C1H1 209 aa12.08□□□□□ -0.48
CLOCK-203ENST00000435527 CHCHD7Q9BUK0 85 aa12.08□□□□□ -0.48
CLOCK-203ENST00000435527 OSTCQ9NRP0 149 aa12.08□□□□□ -0.48
CLOCK-203ENST00000435527 TRAV8-3A0A0A6YYJ7 113 aa12.07□□□□□ -0.48
CLOCK-203ENST00000435527 PSCAO43653 123 aa12.07□□□□□ -0.48
CLOCK-203ENST00000435527 FUSP35637 526 aaKnown RBP eCLIP12.07□□□□□ -0.481e-6■□□□□ 11.3
CLOCK-203ENST00000435527 TMEM241Q24JQ0 296 aa12.07□□□□□ -0.48
CLOCK-203ENST00000435527 RASL11AQ6T310 242 aa12.07□□□□□ -0.48
CLOCK-203ENST00000435527 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.07□□□□□ -0.48
CLOCK-203ENST00000435527 URGCP-MRPS24S4R325 110 aa12.07□□□□□ -0.48
CLOCK-203ENST00000435527 A0A087WX48 190 aa12.06□□□□□ -0.48
CLOCK-203ENST00000435527 PEA15Q15121 130 aa12.06□□□□□ -0.48
CLOCK-203ENST00000435527 FAM74A3Q4VXF1 159 aa12.06□□□□□ -0.48
CLOCK-203ENST00000435527 TMEM97Q5BJF2 176 aa12.06□□□□□ -0.48
CLOCK-203ENST00000435527 PGLYRP4Q96LB8 373 aa12.06□□□□□ -0.48
CLOCK-203ENST00000435527 TM2D2Q9BX73 214 aa12.06□□□□□ -0.48
CLOCK-203ENST00000435527 NIT2Q9NQR4 276 aa12.06□□□□□ -0.48
CLOCK-203ENST00000435527 KLK12Q9UKR0 248 aa12.06□□□□□ -0.48
CLOCK-203ENST00000435527 APOBP04114 4563 aaKnown RBP12.06□□□□□ -0.48
CLOCK-203ENST00000435527 TMEM262E9PQX1 116 aa12.05□□□□□ -0.48
CLOCK-203ENST00000435527 CDK2AP2O75956 126 aa12.05□□□□□ -0.48
CLOCK-203ENST00000435527 TSKUQ8WUA8 353 aa12.05□□□□□ -0.48
CLOCK-203ENST00000435527 SMDT1Q9H4I9 107 aa12.05□□□□□ -0.48
CLOCK-203ENST00000435527 HSPG2P98160 4391 aa12.04□□□□□ -0.48
CLOCK-203ENST00000435527 FAM231BA6NCW3 169 aa12.04□□□□□ -0.48
CLOCK-203ENST00000435527 RPL23P62829 140 aaKnown RBP12.04□□□□□ -0.48
CLOCK-203ENST00000435527 CDPF1Q6NVV7 123 aa12.04□□□□□ -0.48
CLOCK-203ENST00000435527 GATD1Q8NB37 220 aa12.04□□□□□ -0.48
CLOCK-203ENST00000435527 ISOC2Q96AB3 205 aa12.04□□□□□ -0.48
CLOCK-203ENST00000435527 GFRA4Q9GZZ7 299 aa12.04□□□□□ -0.48
CLOCK-203ENST00000435527 V9GYV3 84 aa12.04□□□□□ -0.48
CLOCK-203ENST00000435527 ELOBQ15370 118 aa12.03□□□□□ -0.48
CLOCK-203ENST00000435527 MAPKAPK5-AS1Q8N8E1 139 aa12.03□□□□□ -0.48
CLOCK-203ENST00000435527 CHCHD5Q9BSY4 110 aa12.03□□□□□ -0.48
CLOCK-203ENST00000435527 IQCJQ1A5X6 159 aa12.02□□□□□ -0.49
CLOCK-203ENST00000435527 MPV17L2Q567V2 206 aa12.02□□□□□ -0.49
CLOCK-203ENST00000435527 KCNIP4Q6PIL6 250 aa12.02□□□□□ -0.49
CLOCK-203ENST00000435527 ATRAIDQ6UW56 229 aa12.02□□□□□ -0.49
CLOCK-203ENST00000435527 FRZBQ92765 325 aa12.02□□□□□ -0.49
CLOCK-203ENST00000435527 UBE2WQ96B02 151 aa12.02□□□□□ -0.49
CLOCK-203ENST00000435527 KRTAP17-1Q9BYP8 105 aa12.02□□□□□ -0.49
CLOCK-203ENST00000435527 NAT8Q9UHE5 227 aa12.02□□□□□ -0.49
CLOCK-203ENST00000435527 TRBV25-1A0A075B6N4 114 aa12.01□□□□□ -0.49
CLOCK-203ENST00000435527 TRAV26-2A0A0B4J265 109 aa12.01□□□□□ -0.49
CLOCK-203ENST00000435527 HIGD1CA8MV81 97 aa12.01□□□□□ -0.49
CLOCK-203ENST00000435527 WFDC2Q14508 124 aa12.01□□□□□ -0.49
CLOCK-203ENST00000435527 ENHOQ6UWT2 76 aa12.01□□□□□ -0.49
CLOCK-203ENST00000435527 SMIM15Q7Z3B0 74 aa12.01□□□□□ -0.49
CLOCK-203ENST00000435527 C15orf54Q8N8G6 183 aa12.01□□□□□ -0.49
CLOCK-203ENST00000435527 IGHV1-24A0A0C4DH33 117 aa12□□□□□ -0.49
CLOCK-203ENST00000435527 A0A1B0GUT8 65 aa12□□□□□ -0.49
CLOCK-203ENST00000435527 PKIAP61925 76 aa12□□□□□ -0.49
CLOCK-203ENST00000435527 Q8N814 137 aa12□□□□□ -0.49
CLOCK-203ENST00000435527 Q8N976 141 aa12□□□□□ -0.49
CLOCK-203ENST00000435527 COX11Q9Y6N1 276 aa12□□□□□ -0.49
CLOCK-203ENST00000435527 Q0VG73 95 aa11.99□□□□□ -0.49
CLOCK-203ENST00000435527 GAGE6Q13070 117 aa11.99□□□□□ -0.49
CLOCK-203ENST00000435527 RMI2Q96E14 147 aa11.99□□□□□ -0.49
CLOCK-203ENST00000435527 IGKV2D-24A0A075B6R9 120 aa11.98□□□□□ -0.49
CLOCK-203ENST00000435527 KRTAP10-1P60331 282 aa11.98□□□□□ -0.49
CLOCK-203ENST00000435527 RBX1P62877 108 aa11.98□□□□□ -0.49
CLOCK-203ENST00000435527 ADIRFQ15847 76 aa11.98□□□□□ -0.49
CLOCK-203ENST00000435527 NUP35Q8NFH5 326 aa11.98□□□□□ -0.49
CLOCK-203ENST00000435527 DEFB104AQ8WTQ1 72 aa11.98□□□□□ -0.49
CLOCK-203ENST00000435527 BORCS7Q96B45 105 aa11.98□□□□□ -0.49
CLOCK-203ENST00000435527 RPL39LQ96EH5 51 aaKnown RBP11.98□□□□□ -0.49
CLOCK-203ENST00000435527 TMEM191AQ9H0A3 160 aa11.98□□□□□ -0.49
CLOCK-203ENST00000435527 ANGP03950 147 aaKnown RBP11.97□□□□□ -0.49
CLOCK-203ENST00000435527 NTN5Q8WTR8 489 aaPredicted RBP11.97□□□□□ -0.49
CLOCK-203ENST00000435527 BAALCQ8WXS3 180 aa11.97□□□□□ -0.49
CLOCK-203ENST00000435527 GCSHP23434 173 aa11.96□□□□□ -0.49
CLOCK-203ENST00000435527 RNF185Q96GF1 192 aa11.96□□□□□ -0.49
CLOCK-203ENST00000435527 PRR34Q9NV39 138 aa11.96□□□□□ -0.49
CLOCK-203ENST00000435527 LECT2O14960 151 aa11.95□□□□□ -0.5
CLOCK-203ENST00000435527 GAS8-AS1O95177 125 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms