RNA–Protein interactions for RNA: ENST00000433753.4

SEMA3B-204, Transcript of semaphorin 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-204ENST00000433753 VPREB3Q9UKI3 123 aa12.83□□□□□ -0.36
SEMA3B-204ENST00000433753 NOTCH3Q9UM47 2321 aa12.82□□□□□ -0.36
SEMA3B-204ENST00000433753 TRBV27A0A0K0K1C4 114 aa12.82□□□□□ -0.36
SEMA3B-204ENST00000433753 LINC01619G3V211 115 aa12.82□□□□□ -0.36
SEMA3B-204ENST00000433753 DSCR9P59020 149 aa12.82□□□□□ -0.36
SEMA3B-204ENST00000433753 TCTEX1D4Q5JR98 221 aa12.82□□□□□ -0.36
SEMA3B-204ENST00000433753 PROK1P58294 105 aa12.82□□□□□ -0.36
SEMA3B-204ENST00000433753 SPANXB1Q9NS25 103 aaPredicted RBP12.82□□□□□ -0.36
SEMA3B-204ENST00000433753 P0DMU3 169 aa12.81□□□□□ -0.36
SEMA3B-204ENST00000433753 FAM231AP0DMU4 169 aa12.81□□□□□ -0.36
SEMA3B-204ENST00000433753 FAM231CP0DMU5 169 aa12.81□□□□□ -0.36
SEMA3B-204ENST00000433753 RRN3P1Q2M238 152 aa12.81□□□□□ -0.36
SEMA3B-204ENST00000433753 SAMD13Q5VXD3 122 aa12.81□□□□□ -0.36
SEMA3B-204ENST00000433753 RPL32P62910 135 aaKnown RBP12.81□□□□□ -0.36
SEMA3B-204ENST00000433753 SYT8Q8NBV8 401 aa12.81□□□□□ -0.36
SEMA3B-204ENST00000433753 A0A1B0GWB2 263 aa12.8□□□□□ -0.36
SEMA3B-204ENST00000433753 Q9UF83 564 aa12.8□□□□□ -0.36
SEMA3B-204ENST00000433753 IGHV3-64A0A075B6Q5 118 aa12.8□□□□□ -0.36
SEMA3B-204ENST00000433753 SH2D6Q7Z4S9 175 aa12.8□□□□□ -0.36
SEMA3B-204ENST00000433753 PGPEP1Q9NXJ5 209 aa12.8□□□□□ -0.36
SEMA3B-204ENST00000433753 DEFB131AP59861 70 aa12.79□□□□□ -0.36
SEMA3B-204ENST00000433753 ODF3Q96PU9 254 aa12.79□□□□□ -0.36
SEMA3B-204ENST00000433753 AKAP9Q99996 3911 aa12.79□□□□□ -0.36
SEMA3B-204ENST00000433753 J3QR89 54 aa12.79□□□□□ -0.36
SEMA3B-204ENST00000433753 Q6YL49 198 aa12.79□□□□□ -0.36
SEMA3B-204ENST00000433753 PRRC2AP48634 2157 aaKnown RBP12.79□□□□□ -0.36
SEMA3B-204ENST00000433753 NACAE9PAV3 2078 aa12.78□□□□□ -0.36
SEMA3B-204ENST00000433753 TRBV6-5A0A0K0K1A5 114 aa12.78□□□□□ -0.36
SEMA3B-204ENST00000433753 LINC01549A6NIU2 74 aa12.78□□□□□ -0.36
SEMA3B-204ENST00000433753 APOMO95445 188 aa12.78□□□□□ -0.36
SEMA3B-204ENST00000433753 TIMM17AQ99595 171 aa12.78□□□□□ -0.36
SEMA3B-204ENST00000433753 CCDC168Q8NDH2 2452 aa12.78□□□□□ -0.36
SEMA3B-204ENST00000433753 CR1P17927 2039 aa12.78□□□□□ -0.36
SEMA3B-204ENST00000433753 GAGE13Q4V321 117 aa12.78□□□□□ -0.36
SEMA3B-204ENST00000433753 TMEM141Q96I45 108 aa12.78□□□□□ -0.36
SEMA3B-204ENST00000433753 UBE2E2Q96LR5 201 aa12.78□□□□□ -0.36
SEMA3B-204ENST00000433753 BBC3Q96PG8 261 aaPredicted RBP12.78□□□□□ -0.36
SEMA3B-204ENST00000433753 NIPBLQ6KC79 2804 aaeCLIP12.77□□□□□ -0.36
SEMA3B-204ENST00000433753 IGHV4-31P0DP07 118 aa12.77□□□□□ -0.36
SEMA3B-204ENST00000433753 ETDBQ3ZM63 59 aa12.77□□□□□ -0.36
SEMA3B-204ENST00000433753 SIGMAR1Q99720 223 aa12.77□□□□□ -0.36
SEMA3B-204ENST00000433753 TSSC4Q9Y5U2 329 aaPredicted RBP12.77□□□□□ -0.36
SEMA3B-204ENST00000433753 A0A0J9YY99 117 aa12.77□□□□□ -0.37
SEMA3B-204ENST00000433753 TMEM89A2RUT3 159 aa12.77□□□□□ -0.37
SEMA3B-204ENST00000433753 ELANEP08246 267 aa12.77□□□□□ -0.37
SEMA3B-204ENST00000433753 GTSF1LQ9H1H1 148 aa12.77□□□□□ -0.37
SEMA3B-204ENST00000433753 MRPL16Q9NX20 251 aaKnown RBP12.77□□□□□ -0.37
SEMA3B-204ENST00000433753 AZU1P20160 251 aa12.76□□□□□ -0.37
SEMA3B-204ENST00000433753 KHDC1LQ5JSQ8 128 aa12.76□□□□□ -0.37
SEMA3B-204ENST00000433753 HERVK_113P61574 105 aa12.76□□□□□ -0.37
SEMA3B-204ENST00000433753 TRPT1Q86TN4 253 aaKnown RBP12.76□□□□□ -0.37
SEMA3B-204ENST00000433753 UBR5O95071 2799 aaPredicted RBP12.75□□□□□ -0.37
SEMA3B-204ENST00000433753 GAGE12HA6NDE8 117 aa12.75□□□□□ -0.37
SEMA3B-204ENST00000433753 J3QLI3 93 aa12.75□□□□□ -0.37
SEMA3B-204ENST00000433753 CEMP1Q6PRD7 247 aaPredicted RBP12.75□□□□□ -0.37
SEMA3B-204ENST00000433753 PRO0461Q9UI25 63 aa12.75□□□□□ -0.37
SEMA3B-204ENST00000433753 RBMY1BA6NDE4 496 aaKnown RBP12.75□□□□□ -0.37
SEMA3B-204ENST00000433753 RBMY1EA6NEQ0 496 aaKnown RBP12.75□□□□□ -0.37
SEMA3B-204ENST00000433753 RBMY1DP0C7P1 496 aaKnown RBP12.75□□□□□ -0.37
SEMA3B-204ENST00000433753 APCP25054 2843 aa12.75□□□□□ -0.37
SEMA3B-204ENST00000433753 SPAG8Q99932 426 aaPredicted RBP12.75□□□□□ -0.37
SEMA3B-204ENST00000433753 RNASE13Q5GAN3 156 aaKnown RBP12.74□□□□□ -0.37
SEMA3B-204ENST00000433753 PAPPA-AS1Q5QFB9 102 aa12.74□□□□□ -0.37
SEMA3B-204ENST00000433753 TMEM61Q8N0U2 210 aa12.74□□□□□ -0.37
SEMA3B-204ENST00000433753 C20orf203Q8NBC4 194 aa12.74□□□□□ -0.37
SEMA3B-204ENST00000433753 LOC107984156A0A0G2JMH3 177 aa12.73□□□□□ -0.37
SEMA3B-204ENST00000433753 A0A0J9YXV3 536 aa12.73□□□□□ -0.37
SEMA3B-204ENST00000433753 I3L3M4 83 aa12.73□□□□□ -0.37
SEMA3B-204ENST00000433753 SCGB1A1P11684 91 aa12.73□□□□□ -0.37
SEMA3B-204ENST00000433753 ARL17AQ8IVW1 177 aa12.73□□□□□ -0.37
SEMA3B-204ENST00000433753 J3QQQ9 107 aa12.73□□□□□ -0.37
SEMA3B-204ENST00000433753 FSHBP01225 129 aa12.73□□□□□ -0.37
SEMA3B-204ENST00000433753 AMELXQ99217 191 aa12.73□□□□□ -0.37
SEMA3B-204ENST00000433753 TMEM238LA0A1B0GVL6 79 aa12.72□□□□□ -0.37
SEMA3B-204ENST00000433753 A6NJY4 79 aa12.72□□□□□ -0.37
SEMA3B-204ENST00000433753 UBE2D1P51668 147 aa12.72□□□□□ -0.37
SEMA3B-204ENST00000433753 SMAGPQ0VAQ4 97 aa12.72□□□□□ -0.37
SEMA3B-204ENST00000433753 NSUN5P1Q3KNT7 163 aa12.72□□□□□ -0.37
SEMA3B-204ENST00000433753 Q6ZSN1 163 aa12.72□□□□□ -0.37
SEMA3B-204ENST00000433753 TSPAN13O95857 204 aa12.72□□□□□ -0.37
SEMA3B-204ENST00000433753 INSL3P51460 131 aa12.72□□□□□ -0.37
SEMA3B-204ENST00000433753 TRGV11A0A075B6L2 103 aa12.71□□□□□ -0.37
SEMA3B-204ENST00000433753 H3BMM0 161 aa12.71□□□□□ -0.37
SEMA3B-204ENST00000433753 SPATA25Q9BR10 227 aa12.71□□□□□ -0.37
SEMA3B-204ENST00000433753 IGLV4-3A0A075B6K6 122 aa12.7□□□□□ -0.38
SEMA3B-204ENST00000433753 RHOHQ15669 191 aa12.7□□□□□ -0.38
SEMA3B-204ENST00000433753 C11orf44Q8N8P7 122 aa12.7□□□□□ -0.38
SEMA3B-204ENST00000433753 ITPR3Q14573 2671 aa12.7□□□□□ -0.38
SEMA3B-204ENST00000433753 IGHV3-30P01768 117 aa12.7□□□□□ -0.38
SEMA3B-204ENST00000433753 IGHV3-30-5P0DP03 117 aa12.7□□□□□ -0.38
SEMA3B-204ENST00000433753 LGALS3P17931 250 aaKnown RBP12.7□□□□□ -0.38
SEMA3B-204ENST00000433753 DLX4Q92988 240 aaPredicted RBP12.7□□□□□ -0.38
SEMA3B-204ENST00000433753 C2CD3Q4AC94 2353 aa12.7□□□□□ -0.38
SEMA3B-204ENST00000433753 PSMB2P49721 201 aa12.69□□□□□ -0.38
SEMA3B-204ENST00000433753 Q5PR19 223 aa12.69□□□□□ -0.38
SEMA3B-204ENST00000433753 SLC25A29Q8N8R3 303 aa12.69□□□□□ -0.38
SEMA3B-204ENST00000433753 VCX2Q9H322 139 aa12.69□□□□□ -0.38
SEMA3B-204ENST00000433753 JMJD1CQ15652 2540 aa12.69□□□□□ -0.38
SEMA3B-204ENST00000433753 ADARB2-AS1A8MUL3 147 aa12.69□□□□□ -0.38
SEMA3B-204ENST00000433753 CFC1BP0CG36 223 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 1103.7 ms