RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 C15orf54Q8N8G6 183 aa11.12□□□□□ -0.63
CPSF4-203ENST00000430038 C11orf52Q96A22 123 aa11.12□□□□□ -0.63
CPSF4-203ENST00000430038 PKHD1L1Q86WI1 4243 aa11.11□□□□□ -0.63
CPSF4-203ENST00000430038 RAB19A4D1S5 217 aa11.11□□□□□ -0.63
CPSF4-203ENST00000430038 PFDN1O60925 122 aa11.11□□□□□ -0.63
CPSF4-203ENST00000430038 SPANXN1Q5VSR9 72 aa11.11□□□□□ -0.63
CPSF4-203ENST00000430038 KRTAP26-1Q6PEX3 210 aa11.11□□□□□ -0.63
CPSF4-203ENST00000430038 RMI2Q96E14 147 aa11.11□□□□□ -0.63
CPSF4-203ENST00000430038 GNG13Q9P2W3 67 aa11.11□□□□□ -0.63
CPSF4-203ENST00000430038 VAX2Q9UIW0 290 aa11.11□□□□□ -0.63
CPSF4-203ENST00000430038 FAT3Q8TDW7 4589 aa11.11□□□□□ -0.63
CPSF4-203ENST00000430038 C19orf71A6NCJ1 209 aa11.1□□□□□ -0.63
CPSF4-203ENST00000430038 F5H697 171 aa11.1□□□□□ -0.63
CPSF4-203ENST00000430038 IGLC6P0CF74 106 aa11.1□□□□□ -0.63
CPSF4-203ENST00000430038 TRBV20OR9-2A0A075B6H5 130 aa11.09□□□□□ -0.63
CPSF4-203ENST00000430038 TRAV1-1A0A0B4J248 108 aa11.09□□□□□ -0.63
CPSF4-203ENST00000430038 ELOBQ15370 118 aa11.09□□□□□ -0.63
CPSF4-203ENST00000430038 CENPWQ5EE01 88 aa11.09□□□□□ -0.63
CPSF4-203ENST00000430038 CIRBP-AS1Q8TBR5 109 aa11.09□□□□□ -0.63
CPSF4-203ENST00000430038 CHAC1Q9BUX1 264 aa11.09□□□□□ -0.63
CPSF4-203ENST00000430038 M0QY20 66 aa11.08□□□□□ -0.64
CPSF4-203ENST00000430038 ANGP03950 147 aaKnown RBP11.08□□□□□ -0.64
CPSF4-203ENST00000430038 Q0VG73 95 aa11.08□□□□□ -0.64
CPSF4-203ENST00000430038 CHCHD5Q9BSY4 110 aa11.08□□□□□ -0.64
CPSF4-203ENST00000430038 RBX1P62877 108 aa11.07□□□□□ -0.64
CPSF4-203ENST00000430038 GAGE6Q13070 117 aa11.07□□□□□ -0.64
CPSF4-203ENST00000430038 CLPSL2Q6UWE3 100 aa11.07□□□□□ -0.64
CPSF4-203ENST00000430038 DEFB104AQ8WTQ1 72 aa11.07□□□□□ -0.64
CPSF4-203ENST00000430038 C1orf43Q9BWL3 253 aa11.07□□□□□ -0.64
CPSF4-203ENST00000430038 PRR34Q9NV39 138 aa11.07□□□□□ -0.64
CPSF4-203ENST00000430038 USP17L23D6RBM5 183 aa11.06□□□□□ -0.64
CPSF4-203ENST00000430038 PLA2G1BP04054 148 aaKnown RBP11.06□□□□□ -0.64
CPSF4-203ENST00000430038 PRSS1P07477 247 aa11.06□□□□□ -0.64
CPSF4-203ENST00000430038 TPPP3Q9BW30 176 aa11.06□□□□□ -0.64
CPSF4-203ENST00000430038 MANBALQ9NQG1 85 aa11.06□□□□□ -0.64
CPSF4-203ENST00000430038 SULT1A2P50226 295 aa11.05□□□□□ -0.64
CPSF4-203ENST00000430038 SUMO4Q6EEV6 95 aa11.05□□□□□ -0.64
CPSF4-203ENST00000430038 KCNIP4Q6PIL6 250 aa11.05□□□□□ -0.64
CPSF4-203ENST00000430038 LINC00269Q8N2A0 174 aa11.05□□□□□ -0.64
CPSF4-203ENST00000430038 OR2D3Q8NGH3 330 aa11.05□□□□□ -0.64
CPSF4-203ENST00000430038 GFRA4Q9GZZ7 299 aa11.05□□□□□ -0.64
CPSF4-203ENST00000430038 PANO1I0J062 215 aa11.04□□□□□ -0.64
CPSF4-203ENST00000430038 EIF5AP63241 154 aaKnown RBP11.04□□□□□ -0.64
CPSF4-203ENST00000430038 FER1L6-AS1Q8NA97 138 aa11.04□□□□□ -0.64
CPSF4-203ENST00000430038 AP1S3Q96PC3 154 aa11.04□□□□□ -0.64
CPSF4-203ENST00000430038 KRTAP29-1A8MX34 341 aaPredicted RBP11.03□□□□□ -0.64
CPSF4-203ENST00000430038 HLA-DQA1P01909 254 aa11.03□□□□□ -0.64
CPSF4-203ENST00000430038 CRPP02741 224 aa11.03□□□□□ -0.64
CPSF4-203ENST00000430038 MGPP08493 103 aa11.03□□□□□ -0.64
CPSF4-203ENST00000430038 IQCJQ1A5X6 159 aa11.03□□□□□ -0.64
CPSF4-203ENST00000430038 LYZL1Q6UWQ5 148 aa11.03□□□□□ -0.64
CPSF4-203ENST00000430038 IGLV4-60A0A075B6I1 120 aa11.02□□□□□ -0.65
CPSF4-203ENST00000430038 J3QL48 77 aa11.02□□□□□ -0.65
CPSF4-203ENST00000430038 SMIM17P0DL12 118 aa11.02□□□□□ -0.65
CPSF4-203ENST00000430038 NKX2-5P52952 324 aaPredicted RBP11.02□□□□□ -0.65
CPSF4-203ENST00000430038 MEF2BQ02080 365 aaPredicted RBP11.02□□□□□ -0.65
CPSF4-203ENST00000430038 MIAQ16674 131 aa11.02□□□□□ -0.65
CPSF4-203ENST00000430038 C20orf203Q8NBC4 194 aa11.02□□□□□ -0.65
CPSF4-203ENST00000430038 TRBV25-1A0A075B6N4 114 aa11.01□□□□□ -0.65
CPSF4-203ENST00000430038 NTF3P20783 257 aa11.01□□□□□ -0.65
CPSF4-203ENST00000430038 GNG4P50150 75 aa11.01□□□□□ -0.65
CPSF4-203ENST00000430038 RAB5CP51148 216 aa11.01□□□□□ -0.65
CPSF4-203ENST00000430038 NUDT10Q8NFP7 164 aa11.01□□□□□ -0.65
CPSF4-203ENST00000430038 NUDT11Q96G61 164 aa11.01□□□□□ -0.65
CPSF4-203ENST00000430038 MED9Q9NWA0 146 aa11.01□□□□□ -0.65
CPSF4-203ENST00000430038 IGLV10-54A0A075B6I4 117 aa11□□□□□ -0.65
CPSF4-203ENST00000430038 K7EN84 100 aa11□□□□□ -0.65
CPSF4-203ENST00000430038 DAZAP1Q96EP5 407 aaKnown RBP11□□□□□ -0.65
CPSF4-203ENST00000430038 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11□□□□□ -0.65
CPSF4-203ENST00000430038 IGHV1-24A0A0C4DH33 117 aa10.99□□□□□ -0.65
CPSF4-203ENST00000430038 BCL2P10415 239 aa10.99□□□□□ -0.65
CPSF4-203ENST00000430038 HNRNPA3P51991 378 aaKnown RBP10.99□□□□□ -0.65
CPSF4-203ENST00000430038 RPS20P60866 119 aaKnown RBP10.99□□□□□ -0.65
CPSF4-203ENST00000430038 C14orf177Q52M58 125 aa10.99□□□□□ -0.65
CPSF4-203ENST00000430038 TMEM97Q5BJF2 176 aa10.99□□□□□ -0.65
CPSF4-203ENST00000430038 C9orf62Q8N4C0 152 aa10.99□□□□□ -0.65
CPSF4-203ENST00000430038 C9orf163Q8N9P6 203 aa10.99□□□□□ -0.65
CPSF4-203ENST00000430038 PDE6DO43924 150 aa10.98□□□□□ -0.65
CPSF4-203ENST00000430038 P01737 135 aa10.98□□□□□ -0.65
CPSF4-203ENST00000430038 SLPIP03973 132 aa10.98□□□□□ -0.65
CPSF4-203ENST00000430038 CACNG7P62955 275 aa10.98□□□□□ -0.65
CPSF4-203ENST00000430038 REG3AQ06141 175 aa10.98□□□□□ -0.65
CPSF4-203ENST00000430038 RASL11AQ6T310 242 aa10.98□□□□□ -0.65
CPSF4-203ENST00000430038 SDIM1Q6ZPB5 146 aa10.98□□□□□ -0.65
CPSF4-203ENST00000430038 TCTE3Q8IZS6 198 aa10.98□□□□□ -0.65
CPSF4-203ENST00000430038 SMIM12Q96EX1 92 aa10.98□□□□□ -0.65
CPSF4-203ENST00000430038 HMCN2Q8NDA2 5059 aa10.97□□□□□ -0.65
CPSF4-203ENST00000430038 IFNA1P01562 189 aa10.97□□□□□ -0.65
CPSF4-203ENST00000430038 FOXA3P55318 350 aaPredicted RBP10.97□□□□□ -0.65
CPSF4-203ENST00000430038 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.97□□□□□ -0.65
CPSF4-203ENST00000430038 OCC1Q8TAD7 63 aa10.97□□□□□ -0.65
CPSF4-203ENST00000430038 RNASE7Q9H1E1 156 aaKnown RBP10.97□□□□□ -0.65
CPSF4-203ENST00000430038 TRAV26-2A0A0B4J265 109 aa10.96□□□□□ -0.65
CPSF4-203ENST00000430038 F2Z2F3 143 aa10.96□□□□□ -0.65
CPSF4-203ENST00000430038 CTRLP40313 264 aa10.96□□□□□ -0.65
CPSF4-203ENST00000430038 DGAT2L7PQ6IED9 249 aa10.96□□□□□ -0.65
CPSF4-203ENST00000430038 GATD1Q8NB37 220 aa10.96□□□□□ -0.65
CPSF4-203ENST00000430038 DPH3P1Q9H4G8 78 aa10.96□□□□□ -0.65
CPSF4-203ENST00000430038 NIT2Q9NQR4 276 aa10.96□□□□□ -0.65
CPSF4-203ENST00000430038 A0A1B0GUV1 79 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms