RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 COX7A2LO14548 114 aa12.9□□□□□ -0.34
SMARCA4-203ENST00000429416 Q0VG73 95 aa12.9□□□□□ -0.35
SMARCA4-203ENST00000429416 P0C879 139 aa12.89□□□□□ -0.35
SMARCA4-203ENST00000429416 Q8N6K4 173 aa12.89□□□□□ -0.35
SMARCA4-203ENST00000429416 NAA38Q9BRA0 125 aaKnown RBP12.89□□□□□ -0.35
SMARCA4-203ENST00000429416 SNHG12Q9BXW3 62 aa12.89□□□□□ -0.35
SMARCA4-203ENST00000429416 NDUFA7O95182 113 aa12.89□□□□□ -0.35
SMARCA4-203ENST00000429416 SMIM9A6NGZ8 99 aa12.88□□□□□ -0.35
SMARCA4-203ENST00000429416 TP53TG3Q9ULZ0 132 aa12.88□□□□□ -0.35
SMARCA4-203ENST00000429416 GAGE2BQ13066 116 aa12.88□□□□□ -0.35
SMARCA4-203ENST00000429416 PKIGQ9Y2B9 76 aa12.88□□□□□ -0.35
SMARCA4-203ENST00000429416 C15orf53Q8NAA6 179 aa12.87□□□□□ -0.35
SMARCA4-203ENST00000429416 SPANXA1Q9NS26 97 aa12.87□□□□□ -0.35
SMARCA4-203ENST00000429416 TRAV4A0A0B4J268 109 aa12.87□□□□□ -0.35
SMARCA4-203ENST00000429416 FGF6P10767 208 aa12.87□□□□□ -0.35
SMARCA4-203ENST00000429416 TIRAPP58753 221 aa12.86□□□□□ -0.35
SMARCA4-203ENST00000429416 SCRT2Q9NQ03 307 aa12.86□□□□□ -0.35
SMARCA4-203ENST00000429416 F8VRH5 84 aa12.86□□□□□ -0.35
SMARCA4-203ENST00000429416 TANC2Q9HCD6 1990 aa12.86□□□□□ -0.35
SMARCA4-203ENST00000429416 LYRM9A8MSI8 78 aa12.86□□□□□ -0.35
SMARCA4-203ENST00000429416 MIFP14174 115 aa12.86□□□□□ -0.35
SMARCA4-203ENST00000429416 TAL2Q16559 108 aa12.85□□□□□ -0.35
SMARCA4-203ENST00000429416 POLR3KQ9Y2Y1 108 aaPredicted RBP12.85□□□□□ -0.35
SMARCA4-203ENST00000429416 TRAV8-3A0A0A6YYJ7 113 aa12.84□□□□□ -0.35
SMARCA4-203ENST00000429416 TRAV8-2A0A0B4J237 113 aa12.84□□□□□ -0.35
SMARCA4-203ENST00000429416 BOD1L2Q8IYS8 172 aa12.84□□□□□ -0.35
SMARCA4-203ENST00000429416 C20orf173Q96LM9 149 aa12.84□□□□□ -0.35
SMARCA4-203ENST00000429416 ZFAND3Q9H8U3 227 aa12.84□□□□□ -0.35
SMARCA4-203ENST00000429416 EML5Q05BV3 1969 aa12.84□□□□□ -0.35
SMARCA4-203ENST00000429416 SLC25A29Q8N8R3 303 aa12.84□□□□□ -0.35
SMARCA4-203ENST00000429416 Q9H8V8 135 aa12.83□□□□□ -0.36
SMARCA4-203ENST00000429416 IGLV2-18A0A075B6J9 118 aa12.83□□□□□ -0.36
SMARCA4-203ENST00000429416 LY6G6CO95867 125 aa12.83□□□□□ -0.36
SMARCA4-203ENST00000429416 EIF4EBP1Q13541 118 aaPredicted RBP12.83□□□□□ -0.36
SMARCA4-203ENST00000429416 ZFP2Q6ZN57 461 aa12.83□□□□□ -0.36
SMARCA4-203ENST00000429416 IGLV1-40P01703 118 aa12.83□□□□□ -0.36
SMARCA4-203ENST00000429416 GDF5OSQ5U4N7 250 aa12.83□□□□□ -0.36
SMARCA4-203ENST00000429416 J3QQQ9 107 aa12.82□□□□□ -0.36
SMARCA4-203ENST00000429416 SAMD5Q5TGI4 173 aa12.82□□□□□ -0.36
SMARCA4-203ENST00000429416 IGHV4-28A0A0C4DH34 117 aa12.82□□□□□ -0.36
SMARCA4-203ENST00000429416 HECTD1Q9ULT8 2610 aa12.81□□□□□ -0.36
SMARCA4-203ENST00000429416 M0R2N4 97 aa12.81□□□□□ -0.36
SMARCA4-203ENST00000429416 IGHV4-30-4P0DP06 118 aa12.81□□□□□ -0.36
SMARCA4-203ENST00000429416 RPL39P62891 51 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-203ENST00000429416 PLA2G2EQ9NZK7 142 aa12.81□□□□□ -0.36
SMARCA4-203ENST00000429416 TRAV10A0A0B4J240 114 aa12.8□□□□□ -0.36
SMARCA4-203ENST00000429416 C10orf126Q8N4M7 172 aa12.8□□□□□ -0.36
SMARCA4-203ENST00000429416 P0DMU3 169 aa12.8□□□□□ -0.36
SMARCA4-203ENST00000429416 FAM231AP0DMU4 169 aa12.8□□□□□ -0.36
SMARCA4-203ENST00000429416 FAM231CP0DMU5 169 aa12.8□□□□□ -0.36
SMARCA4-203ENST00000429416 DKK2Q9UBU2 259 aa12.8□□□□□ -0.36
SMARCA4-203ENST00000429416 A0A0J9YXV3 536 aa12.79□□□□□ -0.36
SMARCA4-203ENST00000429416 CRYGDP07320 174 aa12.79□□□□□ -0.36
SMARCA4-203ENST00000429416 ZNF80P51504 273 aaPredicted RBP12.79□□□□□ -0.36
SMARCA4-203ENST00000429416 GTSF1Q8WW33 167 aa12.79□□□□□ -0.36
SMARCA4-203ENST00000429416 K7EMI3 77 aa12.79□□□□□ -0.36
SMARCA4-203ENST00000429416 TTC32Q5I0X7 151 aa12.79□□□□□ -0.36
SMARCA4-203ENST00000429416 NDUFA1O15239 70 aa12.79□□□□□ -0.36
SMARCA4-203ENST00000429416 MPV17L2Q567V2 206 aa12.79□□□□□ -0.36
SMARCA4-203ENST00000429416 MED14OSP0DP75 135 aa12.78□□□□□ -0.36
SMARCA4-203ENST00000429416 IGKV2-24A0A0C4DH68 120 aa12.78□□□□□ -0.36
SMARCA4-203ENST00000429416 F8P00451 2351 aa12.78□□□□□ -0.36
SMARCA4-203ENST00000429416 OVOL2Q9BRP0 275 aa12.78□□□□□ -0.36
SMARCA4-203ENST00000429416 IGHV4-4A0A075B6R2 117 aa12.77□□□□□ -0.36
SMARCA4-203ENST00000429416 TRBV10-1A0A0K0K1A3 114 aa12.77□□□□□ -0.36
SMARCA4-203ENST00000429416 CCL25O15444 150 aa12.77□□□□□ -0.36
SMARCA4-203ENST00000429416 SPAG11BQ08648 103 aa12.77□□□□□ -0.37
SMARCA4-203ENST00000429416 KIR3DS1Q14943 382 aa12.77□□□□□ -0.37
SMARCA4-203ENST00000429416 ETDCA0A1B0GVM5 59 aa12.77□□□□□ -0.37
SMARCA4-203ENST00000429416 ODF3Q96PU9 254 aa12.77□□□□□ -0.37
SMARCA4-203ENST00000429416 A0A1B0GV90 55 aa12.76□□□□□ -0.37
SMARCA4-203ENST00000429416 LGALS9BQ3B8N2 356 aa12.76□□□□□ -0.37
SMARCA4-203ENST00000429416 LGALS9CQ6DKI2 356 aa12.76□□□□□ -0.37
SMARCA4-203ENST00000429416 DEFB105AQ8NG35 78 aa12.76□□□□□ -0.37
SMARCA4-203ENST00000429416 C2orf82Q6UX34 121 aa12.76□□□□□ -0.37
SMARCA4-203ENST00000429416 LYPD6BQ8NI32 183 aa12.76□□□□□ -0.37
SMARCA4-203ENST00000429416 HIGD2BQ4VC39 106 aa12.75□□□□□ -0.37
SMARCA4-203ENST00000429416 RAI1Q7Z5J4 1906 aaPredicted RBP12.75□□□□□ -0.37
SMARCA4-203ENST00000429416 LINC00269Q8N2A0 174 aa12.75□□□□□ -0.37
SMARCA4-203ENST00000429416 PCNTO95613 3336 aa12.74□□□□□ -0.37
SMARCA4-203ENST00000429416 A0A0J9YWU9 116 aa12.74□□□□□ -0.37
SMARCA4-203ENST00000429416 GAGE12HA6NDE8 117 aa12.74□□□□□ -0.37
SMARCA4-203ENST00000429416 ANKRD17O75179 2603 aaKnown RBP12.74□□□□□ -0.37
SMARCA4-203ENST00000429416 TRBV6-1A0A0K0K1D8 114 aa12.74□□□□□ -0.37
SMARCA4-203ENST00000429416 GTSF1LQ9H1H1 148 aa12.73□□□□□ -0.37
SMARCA4-203ENST00000429416 C11orf1Q9H5F2 150 aa12.73□□□□□ -0.37
SMARCA4-203ENST00000429416 ZNF664Q8N3J9 261 aa12.73□□□□□ -0.37
SMARCA4-203ENST00000429416 CTRLP40313 264 aa12.73□□□□□ -0.37
SMARCA4-203ENST00000429416 NANOS2P60321 138 aaKnown RBP12.73□□□□□ -0.37
SMARCA4-203ENST00000429416 KIR2DL5BA0A0G2JN68 375 aa12.73□□□□□ -0.37
SMARCA4-203ENST00000429416 KIR2DL5BA0A0G2JPC4 375 aa12.73□□□□□ -0.37
SMARCA4-203ENST00000429416 KIR2DL5AQ8N109 375 aa12.73□□□□□ -0.37
SMARCA4-203ENST00000429416 KIR2DL5BQ8NHK3 375 aa12.73□□□□□ -0.37
SMARCA4-203ENST00000429416 COX7B2Q8TF08 81 aa12.72□□□□□ -0.37
SMARCA4-203ENST00000429416 UBE2AP49459 152 aa12.72□□□□□ -0.37
SMARCA4-203ENST00000429416 TIMM17AQ99595 171 aa12.72□□□□□ -0.37
SMARCA4-203ENST00000429416 C14orf177Q52M58 125 aa12.72□□□□□ -0.37
SMARCA4-203ENST00000429416 CEMP1Q6PRD7 247 aaPredicted RBP12.72□□□□□ -0.37
SMARCA4-203ENST00000429416 RETNQ9HD89 108 aa12.72□□□□□ -0.37
SMARCA4-203ENST00000429416 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms