RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 DAND5Q8N907 189 aa3.86□□□□□ -1.79
RIF1-203ENST00000428287 MSRB2Q9Y3D2 182 aa3.86□□□□□ -1.79
RIF1-203ENST00000428287 TRAV25A0A0B4J276 109 aa3.86□□□□□ -1.79
RIF1-203ENST00000428287 CNTFRP26992 372 aa3.86□□□□□ -1.79
RIF1-203ENST00000428287 RNASE4P34096 147 aaKnown RBP3.86□□□□□ -1.79
RIF1-203ENST00000428287 TMEM61Q8N0U2 210 aa3.86□□□□□ -1.79
RIF1-203ENST00000428287 Q8N6K4 173 aa3.86□□□□□ -1.79
RIF1-203ENST00000428287 DPH3P1Q9H4G8 78 aa3.86□□□□□ -1.79
RIF1-203ENST00000428287 FAM215AQ9Y5M1 114 aa3.86□□□□□ -1.79
RIF1-203ENST00000428287 CFIP05156 583 aa3.86□□□□□ -1.79
RIF1-203ENST00000428287 A0A0G2JNJ9 132 aa3.86□□□□□ -1.79
RIF1-203ENST00000428287 H7C423 109 aa3.86□□□□□ -1.79
RIF1-203ENST00000428287 Q9UFV3 132 aa3.86□□□□□ -1.79
RIF1-203ENST00000428287 PRAC2D3DTV9 90 aa3.86□□□□□ -1.79
RIF1-203ENST00000428287 RNASE3P12724 160 aaKnown RBP3.86□□□□□ -1.79
RIF1-203ENST00000428287 FDCSPQ8NFU4 85 aa3.86□□□□□ -1.79
RIF1-203ENST00000428287 LITAFQ99732 161 aa3.86□□□□□ -1.79
RIF1-203ENST00000428287 TRIAP1O43715 76 aa3.86□□□□□ -1.79
RIF1-203ENST00000428287 TIMM17BO60830 172 aa3.86□□□□□ -1.79
RIF1-203ENST00000428287 MRPS36P82909 103 aaKnown RBP3.86□□□□□ -1.79
RIF1-203ENST00000428287 CLPSL1A2RUU4 121 aa3.85□□□□□ -1.79
RIF1-203ENST00000428287 ANXA2RQ3ZCQ2 193 aa3.85□□□□□ -1.79
RIF1-203ENST00000428287 SFTA2Q6UW10 78 aa3.85□□□□□ -1.79
RIF1-203ENST00000428287 LINC00526Q96FQ7 95 aa3.85□□□□□ -1.79
RIF1-203ENST00000428287 ZNF576Q9H609 170 aa3.85□□□□□ -1.79
RIF1-203ENST00000428287 DPM3Q9P2X0 92 aa3.85□□□□□ -1.79
RIF1-203ENST00000428287 OOSP1A8MZH6 123 aa3.85□□□□□ -1.79
RIF1-203ENST00000428287 J3KRW8 73 aa3.85□□□□□ -1.79
RIF1-203ENST00000428287 ARL3P36405 182 aa3.85□□□□□ -1.79
RIF1-203ENST00000428287 CXCL5P42830 114 aa3.85□□□□□ -1.79
RIF1-203ENST00000428287 LINC00477Q96M19 166 aa3.85□□□□□ -1.79
RIF1-203ENST00000428287 CITED2Q99967 270 aaPredicted RBP3.85□□□□□ -1.79
RIF1-203ENST00000428287 SIT1Q9Y3P8 196 aa3.85□□□□□ -1.79
RIF1-203ENST00000428287 HERVK_113P61574 105 aa3.85□□□□□ -1.79
RIF1-203ENST00000428287 NSUN5P1Q3KNT7 163 aa3.85□□□□□ -1.79
RIF1-203ENST00000428287 FAM222AQ5U5X8 452 aa3.85□□□□□ -1.79
RIF1-203ENST00000428287 SPANXN1Q5VSR9 72 aa3.85□□□□□ -1.79
RIF1-203ENST00000428287 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.85□□□□□ -1.79
RIF1-203ENST00000428287 NDUFA7O95182 113 aa3.85□□□□□ -1.79
RIF1-203ENST00000428287 TMEM170BQ5T4T1 132 aa3.85□□□□□ -1.79
RIF1-203ENST00000428287 C14orf178Q8N769 122 aaPredicted RBP3.85□□□□□ -1.79
RIF1-203ENST00000428287 TMEM141Q96I45 108 aa3.85□□□□□ -1.79
RIF1-203ENST00000428287 RHOHQ15669 191 aa3.85□□□□□ -1.79
RIF1-203ENST00000428287 LYPD2Q6UXB3 125 aa3.85□□□□□ -1.79
RIF1-203ENST00000428287 TMEM219Q86XT9 240 aa3.85□□□□□ -1.79
RIF1-203ENST00000428287 A0A0J9YXY3 114 aa3.85□□□□□ -1.79
RIF1-203ENST00000428287 VCYO14598 125 aa3.85□□□□□ -1.79
RIF1-203ENST00000428287 C2orf48Q96LS8 159 aa3.85□□□□□ -1.79
RIF1-203ENST00000428287 CDX4O14627 284 aaPredicted RBP3.84□□□□□ -1.79
RIF1-203ENST00000428287 ATXN8Q156A1 80 aa3.84□□□□□ -1.79
RIF1-203ENST00000428287 C5orf47Q569G3 176 aa3.84□□□□□ -1.79
RIF1-203ENST00000428287 TRPT1Q86TN4 253 aaKnown RBP3.84□□□□□ -1.79
RIF1-203ENST00000428287 IGHV3-21A0A0B4J1V1 117 aa3.84□□□□□ -1.79
RIF1-203ENST00000428287 IGHV3-72A0A0B4J1Y9 119 aa3.84□□□□□ -1.79
RIF1-203ENST00000428287 H3BMM0 161 aa3.84□□□□□ -1.79
RIF1-203ENST00000428287 NDUFB3O43676 98 aa3.84□□□□□ -1.79
RIF1-203ENST00000428287 CNIH1O95406 144 aa3.84□□□□□ -1.79
RIF1-203ENST00000428287 IGFL3Q6UXB1 125 aa3.84□□□□□ -1.79
RIF1-203ENST00000428287 UBE2WQ96B02 151 aa3.84□□□□□ -1.79
RIF1-203ENST00000428287 RPL39LQ96EH5 51 aaKnown RBP3.84□□□□□ -1.79
RIF1-203ENST00000428287 TIMD4Q96H15 378 aa3.84□□□□□ -1.79
RIF1-203ENST00000428287 KLLNB2CW77 178 aa3.84□□□□□ -1.79
RIF1-203ENST00000428287 CD3EP07766 207 aa3.84□□□□□ -1.79
RIF1-203ENST00000428287 BEAN1Q3B7T3 259 aa3.84□□□□□ -1.79
RIF1-203ENST00000428287 PYGO1Q9Y3Y4 419 aa3.84□□□□□ -1.79
RIF1-203ENST00000428287 MEGF8Q7Z7M0 2845 aa3.84□□□□□ -1.79
RIF1-203ENST00000428287 PATE3B3GLJ2 98 aa3.84□□□□□ -1.79
RIF1-203ENST00000428287 APELAP0DMC3 54 aa3.84□□□□□ -1.8
RIF1-203ENST00000428287 C22orf24Q9Y442 160 aa3.84□□□□□ -1.8
RIF1-203ENST00000428287 TRAV2A0A0B4J234 112 aa3.84□□□□□ -1.8
RIF1-203ENST00000428287 RNF152Q8N8N0 203 aa3.84□□□□□ -1.8
RIF1-203ENST00000428287 DCANP1Q8TF63 244 aa3.84□□□□□ -1.8
RIF1-203ENST00000428287 IGHV1-69P01742 117 aa3.83□□□□□ -1.8
RIF1-203ENST00000428287 TIMM21Q9BVV7 248 aa3.83□□□□□ -1.8
RIF1-203ENST00000428287 EDA2RQ9HAV5 297 aa3.83□□□□□ -1.8
RIF1-203ENST00000428287 LRRC75A-AS1Q8N1F1 130 aa3.83□□□□□ -1.8
RIF1-203ENST00000428287 K7ENP7 123 aa3.83□□□□□ -1.8
RIF1-203ENST00000428287 COX7CP15954 63 aa3.83□□□□□ -1.8
RIF1-203ENST00000428287 FAM19A5Q7Z5A7 132 aaPredicted RBP3.83□□□□□ -1.8
RIF1-203ENST00000428287 VMO1Q7Z5L0 202 aa3.83□□□□□ -1.8
RIF1-203ENST00000428287 CSDC2Q9Y534 153 aaKnown RBP3.83□□□□□ -1.8
RIF1-203ENST00000428287 C9orf139Q6ZV77 190 aa3.83□□□□□ -1.8
RIF1-203ENST00000428287 IGHV7-81A0A0B4J1V7 117 aa3.82□□□□□ -1.8
RIF1-203ENST00000428287 TRAV21A0A0B4J279 112 aa3.82□□□□□ -1.8
RIF1-203ENST00000428287 H3BVH4 76 aa3.82□□□□□ -1.8
RIF1-203ENST00000428287 PHLDA3Q9Y5J5 127 aa3.82□□□□□ -1.8
RIF1-203ENST00000428287 COX6CP09669 75 aa3.82□□□□□ -1.8
RIF1-203ENST00000428287 IGHV3-30-3P0DP02 117 aa3.82□□□□□ -1.8
RIF1-203ENST00000428287 KLK15Q9H2R5 256 aa3.82□□□□□ -1.8
RIF1-203ENST00000428287 NPFFO15130 113 aa3.82□□□□□ -1.8
RIF1-203ENST00000428287 PRORYQ9H606 182 aa3.82□□□□□ -1.8
RIF1-203ENST00000428287 IGLV5-45A0A087WSX0 123 aa3.82□□□□□ -1.8
RIF1-203ENST00000428287 FAM236AA0A1B0GUQ0 79 aa3.82□□□□□ -1.8
RIF1-203ENST00000428287 FAM236BA0A1B0GV22 79 aa3.82□□□□□ -1.8
RIF1-203ENST00000428287 ENSAO43768 121 aaKnown RBP3.82□□□□□ -1.8
RIF1-203ENST00000428287 PRR9Q5T870 116 aa3.82□□□□□ -1.8
RIF1-203ENST00000428287 C2orf82Q6UX34 121 aa3.82□□□□□ -1.8
RIF1-203ENST00000428287 C3orf22Q8N5N4 141 aa3.82□□□□□ -1.8
RIF1-203ENST00000428287 VSIG2Q96IQ7 327 aa3.82□□□□□ -1.8
RIF1-203ENST00000428287 Q8N9W7 124 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms