RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 LINC00308Q8TCZ7 52 aa4.17□□□□□ -1.74
VTI1BP4-201ENST00000427516 ORMDL1Q9P0S3 153 aa4.17□□□□□ -1.74
VTI1BP4-201ENST00000427516 KLK9Q9UKQ9 250 aa4.17□□□□□ -1.74
VTI1BP4-201ENST00000427516 Q0VFX4 171 aa4.16□□□□□ -1.74
VTI1BP4-201ENST00000427516 BEAN1Q3B7T3 259 aa4.16□□□□□ -1.74
VTI1BP4-201ENST00000427516 C19orf54Q5BKX5 351 aa4.16□□□□□ -1.74
VTI1BP4-201ENST00000427516 PIK3CD-AS1Q5SR53 167 aa4.16□□□□□ -1.74
VTI1BP4-201ENST00000427516 DEFB132Q7Z7B7 95 aa4.16□□□□□ -1.74
VTI1BP4-201ENST00000427516 ZNF575Q86XF7 245 aa4.16□□□□□ -1.74
VTI1BP4-201ENST00000427516 KRTAP4-9Q9BYQ8 210 aa4.16□□□□□ -1.74
VTI1BP4-201ENST00000427516 SMAD5-AS1Q9Y6J3 95 aa4.16□□□□□ -1.74
VTI1BP4-201ENST00000427516 IGKV3D-7A0A0C4DH55 119 aa4.15□□□□□ -1.75
VTI1BP4-201ENST00000427516 A0A0J9YXV3 536 aa4.15□□□□□ -1.75
VTI1BP4-201ENST00000427516 A0A1W2PRX2 142 aa4.15□□□□□ -1.75
VTI1BP4-201ENST00000427516 F6UB75 175 aa4.15□□□□□ -1.75
VTI1BP4-201ENST00000427516 H7BZZ5 65 aa4.15□□□□□ -1.75
VTI1BP4-201ENST00000427516 TMEM256-PLSCR3K7ERE1 68 aa4.15□□□□□ -1.75
VTI1BP4-201ENST00000427516 SPRY2O43597 315 aa4.15□□□□□ -1.75
VTI1BP4-201ENST00000427516 OXTP01178 125 aa4.15□□□□□ -1.75
VTI1BP4-201ENST00000427516 CTSGP08311 255 aa4.15□□□□□ -1.75
VTI1BP4-201ENST00000427516 LOXP28300 417 aaPredicted RBP4.15□□□□□ -1.75
VTI1BP4-201ENST00000427516 RPL39P62891 51 aaKnown RBP4.15□□□□□ -1.75
VTI1BP4-201ENST00000427516 PMS2CLQ68D20 193 aa4.15□□□□□ -1.75
VTI1BP4-201ENST00000427516 MRPL55Q7Z7F7 128 aaKnown RBP4.15□□□□□ -1.75
VTI1BP4-201ENST00000427516 LINC01561Q8N1V8 128 aa4.15□□□□□ -1.75
VTI1BP4-201ENST00000427516 SAP25Q8TEE9 199 aa4.15□□□□□ -1.75
VTI1BP4-201ENST00000427516 C11orf21Q9P2W6 132 aa4.15□□□□□ -1.75
VTI1BP4-201ENST00000427516 DPM3Q9P2X0 92 aa4.15□□□□□ -1.75
VTI1BP4-201ENST00000427516 CTSZQ9UBR2 303 aa4.15□□□□□ -1.75
VTI1BP4-201ENST00000427516 KIF25-AS1Q9Y6Z4 181 aa4.15□□□□□ -1.75
VTI1BP4-201ENST00000427516 IGHV3-64A0A075B6Q5 118 aa4.14□□□□□ -1.75
VTI1BP4-201ENST00000427516 IGLV5-45A0A087WSX0 123 aa4.14□□□□□ -1.75
VTI1BP4-201ENST00000427516 IGHV3-72A0A0B4J1Y9 119 aa4.14□□□□□ -1.75
VTI1BP4-201ENST00000427516 FAM223BA6NKX1 122 aa4.14□□□□□ -1.75
VTI1BP4-201ENST00000427516 APELAP0DMC3 54 aa4.14□□□□□ -1.75
VTI1BP4-201ENST00000427516 CXCL6P80162 114 aa4.14□□□□□ -1.75
VTI1BP4-201ENST00000427516 RUSC1-AS1Q66K80 236 aa4.14□□□□□ -1.75
VTI1BP4-201ENST00000427516 LYPD5Q6UWN5 251 aa4.14□□□□□ -1.75
VTI1BP4-201ENST00000427516 Q6ZRU5 148 aa4.14□□□□□ -1.75
VTI1BP4-201ENST00000427516 Q6ZS52 159 aa4.14□□□□□ -1.75
VTI1BP4-201ENST00000427516 FAM223AQ8IWN6 122 aa4.14□□□□□ -1.75
VTI1BP4-201ENST00000427516 DEFB119Q8N690 84 aa4.14□□□□□ -1.75
VTI1BP4-201ENST00000427516 SIRPDQ9H106 197 aa4.14□□□□□ -1.75
VTI1BP4-201ENST00000427516 DEFB127Q9H1M4 99 aa4.14□□□□□ -1.75
VTI1BP4-201ENST00000427516 SPRR3Q9UBC9 169 aa4.14□□□□□ -1.75
VTI1BP4-201ENST00000427516 SEC16AO15027 2179 aa4.14□□□□□ -1.75
VTI1BP4-201ENST00000427516 DSCAML1Q8TD84 2053 aa4.14□□□□□ -1.75
VTI1BP4-201ENST00000427516 KRTAP9-7A8MTY7 169 aa4.13□□□□□ -1.75
VTI1BP4-201ENST00000427516 PRAC2D3DTV9 90 aa4.13□□□□□ -1.75
VTI1BP4-201ENST00000427516 RPL11P62913 178 aaKnown RBP4.13□□□□□ -1.75
VTI1BP4-201ENST00000427516 MINOS1Q5TGZ0 78 aa4.13□□□□□ -1.75
VTI1BP4-201ENST00000427516 DGAT2L7PQ6IED9 249 aa4.13□□□□□ -1.75
VTI1BP4-201ENST00000427516 ZFAND2AQ8N6M9 145 aa4.13□□□□□ -1.75
VTI1BP4-201ENST00000427516 WFDC11Q8NEX6 87 aa4.13□□□□□ -1.75
VTI1BP4-201ENST00000427516 ITLN2Q8WWU7 325 aaPredicted RBP4.13□□□□□ -1.75
VTI1BP4-201ENST00000427516 C14orf132Q9NPU4 83 aa4.13□□□□□ -1.75
VTI1BP4-201ENST00000427516 LINC00846Q9NV44 126 aa4.13□□□□□ -1.75
VTI1BP4-201ENST00000427516 ZNRD1Q9P1U0 126 aa4.13□□□□□ -1.75
VTI1BP4-201ENST00000427516 MINOS1-NBL1R4GNA1 71 aa4.13□□□□□ -1.75
VTI1BP4-201ENST00000427516 RTTNQ86VV8 2226 aa4.13□□□□□ -1.75
VTI1BP4-201ENST00000427516 PCNX2A6NKB5 2137 aa4.12□□□□□ -1.75
VTI1BP4-201ENST00000427516 TRAV23DV6A0A075B6W5 121 aa4.12□□□□□ -1.75
VTI1BP4-201ENST00000427516 LY6G6EA0A0G2JKS1 128 aa4.12□□□□□ -1.75
VTI1BP4-201ENST00000427516 M0QY20 66 aa4.12□□□□□ -1.75
VTI1BP4-201ENST00000427516 TRBV12-3P01733 135 aa4.12□□□□□ -1.75
VTI1BP4-201ENST00000427516 RNASE3P12724 160 aaKnown RBP4.12□□□□□ -1.75
VTI1BP4-201ENST00000427516 MIFP14174 115 aa4.12□□□□□ -1.75
VTI1BP4-201ENST00000427516 ESRGQ1W209 222 aa4.12□□□□□ -1.75
VTI1BP4-201ENST00000427516 C15orf32Q32M92 178 aa4.12□□□□□ -1.75
VTI1BP4-201ENST00000427516 ADAMTSL4-AS1Q5T5F5 129 aa4.12□□□□□ -1.75
VTI1BP4-201ENST00000427516 FAM19A3Q7Z5A8 133 aa4.12□□□□□ -1.75
VTI1BP4-201ENST00000427516 VMO1Q7Z5L0 202 aa4.12□□□□□ -1.75
VTI1BP4-201ENST00000427516 C16orf95Q9H693 158 aa4.12□□□□□ -1.75
VTI1BP4-201ENST00000427516 U3KQA8 63 aa4.12□□□□□ -1.75
VTI1BP4-201ENST00000427516 IGLV5-39A0A0G2JS06 123 aa4.11□□□□□ -1.75
VTI1BP4-201ENST00000427516 IBA57-AS1B1ANH7 110 aa4.11□□□□□ -1.75
VTI1BP4-201ENST00000427516 KLLNB2CW77 178 aa4.11□□□□□ -1.75
VTI1BP4-201ENST00000427516 F8WEM9 126 aa4.11□□□□□ -1.75
VTI1BP4-201ENST00000427516 NDUFA4O00483 81 aa4.11□□□□□ -1.75
VTI1BP4-201ENST00000427516 CCL4P13236 92 aa4.11□□□□□ -1.75
VTI1BP4-201ENST00000427516 LINC00315P59091 139 aa4.11□□□□□ -1.75
VTI1BP4-201ENST00000427516 FAM74A4Q5TZK3 123 aa4.11□□□□□ -1.75
VTI1BP4-201ENST00000427516 Q9H8V8 135 aa4.11□□□□□ -1.75
VTI1BP4-201ENST00000427516 CACNA1DQ01668 2161 aa4.11□□□□□ -1.75
VTI1BP4-201ENST00000427516 A0A087WVE0 104 aa4.1□□□□□ -1.75
VTI1BP4-201ENST00000427516 H3BUA1 57 aa4.1□□□□□ -1.75
VTI1BP4-201ENST00000427516 SNRPD3P62318 126 aaKnown RBP4.1□□□□□ -1.75
VTI1BP4-201ENST00000427516 IGFL4Q6B9Z1 124 aa4.1□□□□□ -1.75
VTI1BP4-201ENST00000427516 LINC00482Q8N8I6 264 aa4.1□□□□□ -1.75
VTI1BP4-201ENST00000427516 C11orf44Q8N8P7 122 aa4.1□□□□□ -1.75
VTI1BP4-201ENST00000427516 C9orf106Q8NAJ2 232 aa4.1□□□□□ -1.75
VTI1BP4-201ENST00000427516 CCL17Q92583 94 aa4.1□□□□□ -1.75
VTI1BP4-201ENST00000427516 HES7Q9BYE0 225 aa4.1□□□□□ -1.75
VTI1BP4-201ENST00000427516 CYSTM1Q9H1C7 97 aa4.1□□□□□ -1.75
VTI1BP4-201ENST00000427516 TNCP24821 2201 aa4.09□□□□□ -1.75
VTI1BP4-201ENST00000427516 KNTC1P50748 2209 aa4.09□□□□□ -1.75
VTI1BP4-201ENST00000427516 CABIN1Q9Y6J0 2220 aa4.09□□□□□ -1.75
VTI1BP4-201ENST00000427516 LOC110117498A0A087WWA1 95 aa4.09□□□□□ -1.75
VTI1BP4-201ENST00000427516 A0A0U1RRA0 63 aa4.09□□□□□ -1.75
VTI1BP4-201ENST00000427516 LINC01565O15544 149 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms