RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 A0A0J9YXV3 536 aa5.59□□□□□ -1.51
SMARCC1-202ENST00000425518 A4D1N5 150 aa5.59□□□□□ -1.51
SMARCC1-202ENST00000425518 ADARB2-AS1A8MUL3 147 aa5.59□□□□□ -1.51
SMARCC1-202ENST00000425518 M0QY20 66 aa5.59□□□□□ -1.51
SMARCC1-202ENST00000425518 IGLV1-40P01703 118 aa5.59□□□□□ -1.51
SMARCC1-202ENST00000425518 SCGB1A1P11684 91 aa5.59□□□□□ -1.51
SMARCC1-202ENST00000425518 SNRPD3P62318 126 aaKnown RBP5.59□□□□□ -1.51
SMARCC1-202ENST00000425518 NAV2Q8IVL1 2488 aa5.59□□□□□ -1.51
SMARCC1-202ENST00000425518 LGALS9O00182 355 aa5.59□□□□□ -1.52
SMARCC1-202ENST00000425518 SYNJ2BPP57105 145 aa5.59□□□□□ -1.52
SMARCC1-202ENST00000425518 UBE2D3P61077 147 aa5.59□□□□□ -1.52
SMARCC1-202ENST00000425518 UBE2D2P62837 147 aa5.59□□□□□ -1.52
SMARCC1-202ENST00000425518 RPL32P62910 135 aaKnown RBP5.59□□□□□ -1.52
SMARCC1-202ENST00000425518 C10orf126Q8N4M7 172 aa5.59□□□□□ -1.52
SMARCC1-202ENST00000425518 VCX2Q9H322 139 aa5.59□□□□□ -1.52
SMARCC1-202ENST00000425518 BEX4Q9NWD9 120 aaPredicted RBP5.59□□□□□ -1.52
SMARCC1-202ENST00000425518 MYO9AB2RTY4 2548 aa5.58□□□□□ -1.52
SMARCC1-202ENST00000425518 IGHV1OR15-1A0A075B7D0 117 aa5.58□□□□□ -1.52
SMARCC1-202ENST00000425518 A8MWV9 139 aa5.58□□□□□ -1.52
SMARCC1-202ENST00000425518 CKS1BP61024 79 aa5.58□□□□□ -1.52
SMARCC1-202ENST00000425518 Q1RN00 199 aa5.58□□□□□ -1.52
SMARCC1-202ENST00000425518 C10orf105Q8TEF2 133 aa5.58□□□□□ -1.52
SMARCC1-202ENST00000425518 SPXQ9BT56 116 aa5.58□□□□□ -1.52
SMARCC1-202ENST00000425518 ZNF580Q9UK33 172 aa5.58□□□□□ -1.52
SMARCC1-202ENST00000425518 C2CD3Q4AC94 2353 aa5.58□□□□□ -1.52
SMARCC1-202ENST00000425518 CELSR2Q9HCU4 2923 aa5.58□□□□□ -1.52
SMARCC1-202ENST00000425518 A0A1B0GV72 72 aa5.58□□□□□ -1.52
SMARCC1-202ENST00000425518 K7EMT4 169 aa5.58□□□□□ -1.52
SMARCC1-202ENST00000425518 IGHV4-59P01825 116 aa5.58□□□□□ -1.52
SMARCC1-202ENST00000425518 PRSS2P07478 247 aa5.58□□□□□ -1.52
SMARCC1-202ENST00000425518 MSMBP08118 114 aa5.58□□□□□ -1.52
SMARCC1-202ENST00000425518 SPINK8P0C7L1 97 aa5.58□□□□□ -1.52
SMARCC1-202ENST00000425518 P0DMU3 169 aa5.58□□□□□ -1.52
SMARCC1-202ENST00000425518 FAM231AP0DMU4 169 aa5.58□□□□□ -1.52
SMARCC1-202ENST00000425518 FAM231CP0DMU5 169 aa5.58□□□□□ -1.52
SMARCC1-202ENST00000425518 RNASE13Q5GAN3 156 aaKnown RBP5.58□□□□□ -1.52
SMARCC1-202ENST00000425518 A0A0J9YX75 114 aa5.58□□□□□ -1.52
SMARCC1-202ENST00000425518 MT-ATP8P03928 68 aa5.58□□□□□ -1.52
SMARCC1-202ENST00000425518 TRPT1Q86TN4 253 aaKnown RBP5.58□□□□□ -1.52
SMARCC1-202ENST00000425518 MUSTN1Q8IVN3 82 aa5.58□□□□□ -1.52
SMARCC1-202ENST00000425518 CARD19Q96LW7 228 aa5.58□□□□□ -1.52
SMARCC1-202ENST00000425518 CRYBG3Q68DQ2 2970 aa5.57□□□□□ -1.52
SMARCC1-202ENST00000425518 KNCNA6PVL3 124 aa5.57□□□□□ -1.52
SMARCC1-202ENST00000425518 PRM2P04554 102 aa5.57□□□□□ -1.52
SMARCC1-202ENST00000425518 C9orf85Q96MD7 179 aa5.57□□□□□ -1.52
SMARCC1-202ENST00000425518 CDIP1Q9H305 208 aa5.57□□□□□ -1.52
SMARCC1-202ENST00000425518 FLNCQ14315 2725 aa5.57□□□□□ -1.52
SMARCC1-202ENST00000425518 TRBV6-5A0A0K0K1A5 114 aa5.57□□□□□ -1.52
SMARCC1-202ENST00000425518 C9JAW5 83 aa5.57□□□□□ -1.52
SMARCC1-202ENST00000425518 PROK1P58294 105 aa5.57□□□□□ -1.52
SMARCC1-202ENST00000425518 CEMP1Q6PRD7 247 aaPredicted RBP5.57□□□□□ -1.52
SMARCC1-202ENST00000425518 TEN1Q86WV5 123 aa5.57□□□□□ -1.52
SMARCC1-202ENST00000425518 C20orf203Q8NBC4 194 aa5.57□□□□□ -1.52
SMARCC1-202ENST00000425518 PPDPFLQ8WWR9 84 aa5.57□□□□□ -1.52
SMARCC1-202ENST00000425518 AMELXQ99217 191 aa5.57□□□□□ -1.52
SMARCC1-202ENST00000425518 ERG28Q9UKR5 140 aa5.57□□□□□ -1.52
SMARCC1-202ENST00000425518 TRBV20-1A0A075B6N2 111 aa5.57□□□□□ -1.52
SMARCC1-202ENST00000425518 I3L3M4 83 aa5.57□□□□□ -1.52
SMARCC1-202ENST00000425518 TMEM223A0PJW6 202 aa5.56□□□□□ -1.52
SMARCC1-202ENST00000425518 LEPROTO15243 131 aa5.56□□□□□ -1.52
SMARCC1-202ENST00000425518 ZNF22P17026 224 aaPredicted RBP5.56□□□□□ -1.52
SMARCC1-202ENST00000425518 FHL3Q13643 280 aa5.56□□□□□ -1.52
SMARCC1-202ENST00000425518 ATP6V0E2Q8NHE4 81 aa5.56□□□□□ -1.52
SMARCC1-202ENST00000425518 NRGNQ92686 78 aa5.56□□□□□ -1.52
SMARCC1-202ENST00000425518 ITPR1Q14643 2758 aa5.56□□□□□ -1.52
SMARCC1-202ENST00000425518 J3QKU1 62 aa5.56□□□□□ -1.52
SMARCC1-202ENST00000425518 RHODO00212 210 aa5.56□□□□□ -1.52
SMARCC1-202ENST00000425518 BRI3O95415 125 aa5.56□□□□□ -1.52
SMARCC1-202ENST00000425518 DEFB112Q30KQ8 113 aa5.56□□□□□ -1.52
SMARCC1-202ENST00000425518 ANKRD29Q8N6D5 301 aa5.56□□□□□ -1.52
SMARCC1-202ENST00000425518 MAPK1IP1LQ8NDC0 245 aa5.56□□□□□ -1.52
SMARCC1-202ENST00000425518 CD28P10747 220 aa5.56□□□□□ -1.52
SMARCC1-202ENST00000425518 PSMB8P28062 276 aa5.56□□□□□ -1.52
SMARCC1-202ENST00000425518 NPC2P61916 151 aa5.56□□□□□ -1.52
SMARCC1-202ENST00000425518 RHOHQ15669 191 aa5.56□□□□□ -1.52
SMARCC1-202ENST00000425518 ZANQ9Y493 2812 aa5.56□□□□□ -1.52
SMARCC1-202ENST00000425518 IGLV4-3A0A075B6K6 122 aa5.55□□□□□ -1.52
SMARCC1-202ENST00000425518 TRAV8-3A0A0A6YYJ7 113 aa5.55□□□□□ -1.52
SMARCC1-202ENST00000425518 K7EQG2 157 aa5.55□□□□□ -1.52
SMARCC1-202ENST00000425518 SLC25A20O43772 301 aa5.55□□□□□ -1.52
SMARCC1-202ENST00000425518 XGP55808 180 aa5.55□□□□□ -1.52
SMARCC1-202ENST00000425518 CFHR3Q02985 330 aa5.55□□□□□ -1.52
SMARCC1-202ENST00000425518 TLN2Q9Y4G6 2542 aa5.55□□□□□ -1.52
SMARCC1-202ENST00000425518 IGHV3-33P01772 117 aa5.55□□□□□ -1.52
SMARCC1-202ENST00000425518 NSUN5P1Q3KNT7 163 aa5.55□□□□□ -1.52
SMARCC1-202ENST00000425518 Q5PR19 223 aa5.55□□□□□ -1.52
SMARCC1-202ENST00000425518 Q6ZUT4 128 aa5.55□□□□□ -1.52
SMARCC1-202ENST00000425518 Q9UF83 564 aa5.55□□□□□ -1.52
SMARCC1-202ENST00000425518 CFAP46Q8IYW2 2715 aa5.54□□□□□ -1.52
SMARCC1-202ENST00000425518 NACAE9PAV3 2078 aa5.54□□□□□ -1.52
SMARCC1-202ENST00000425518 B4DSR2 109 aa5.54□□□□□ -1.52
SMARCC1-202ENST00000425518 EIF4EBP3O60516 100 aaPredicted RBP5.54□□□□□ -1.52
SMARCC1-202ENST00000425518 CRYBA4P53673 196 aa5.54□□□□□ -1.52
SMARCC1-202ENST00000425518 GEMIN7Q9H840 131 aaKnown RBP5.54□□□□□ -1.52
SMARCC1-202ENST00000425518 A8MZ25 164 aa5.54□□□□□ -1.52
SMARCC1-202ENST00000425518 TMEM263Q8WUH6 116 aaKnown RBP5.54□□□□□ -1.52
SMARCC1-202ENST00000425518 TNFRSF18Q9Y5U5 241 aa5.54□□□□□ -1.52
SMARCC1-202ENST00000425518 CCDC168Q8NDH2 2452 aa5.54□□□□□ -1.52
SMARCC1-202ENST00000425518 A0A0J9YXY3 114 aa5.54□□□□□ -1.52
SMARCC1-202ENST00000425518 IGHV3-30-3P0DP02 117 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms