RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 GPHB5Q86YW7 130 aa8.49□□□□□ -1.05
SEC61A1-202ENST00000424880 LINC00477Q96M19 166 aa8.49□□□□□ -1.05
SEC61A1-202ENST00000424880 CITED2Q99967 270 aaPredicted RBP8.49□□□□□ -1.05
SEC61A1-202ENST00000424880 DPH3P1Q9H4G8 78 aa8.49□□□□□ -1.05
SEC61A1-202ENST00000424880 DUX5Q96PT3 197 aa8.48□□□□□ -1.05
SEC61A1-202ENST00000424880 TRAV41A0A0B4J266 112 aa8.48□□□□□ -1.05
SEC61A1-202ENST00000424880 TRBV10-2A0A0K0K1G8 114 aa8.48□□□□□ -1.05
SEC61A1-202ENST00000424880 IGIPA6NJ69 53 aa8.48□□□□□ -1.05
SEC61A1-202ENST00000424880 NDUFA7O95182 113 aa8.48□□□□□ -1.05
SEC61A1-202ENST00000424880 DEFB121Q5J5C9 76 aa8.48□□□□□ -1.05
SEC61A1-202ENST00000424880 A0A0J9YXV3 536 aa8.48□□□□□ -1.05
SEC61A1-202ENST00000424880 PF4V1P10720 104 aa8.48□□□□□ -1.05
SEC61A1-202ENST00000424880 POM121L12Q8N7R1 296 aa8.48□□□□□ -1.05
SEC61A1-202ENST00000424880 IMUPQ9GZP8 106 aa8.48□□□□□ -1.05
SEC61A1-202ENST00000424880 SPANXCQ9NY87 97 aa8.48□□□□□ -1.05
SEC61A1-202ENST00000424880 J3KT08 172 aa8.47□□□□□ -1.05
SEC61A1-202ENST00000424880 ADAMTSL4-AS1Q5T5F5 129 aa8.47□□□□□ -1.05
SEC61A1-202ENST00000424880 RPS28P62857 69 aaKnown RBP8.47□□□□□ -1.05
SEC61A1-202ENST00000424880 CHD8Q9HCK8 2581 aa8.47□□□□□ -1.05
SEC61A1-202ENST00000424880 IGHV4-4A0A075B6R2 117 aa8.46□□□□□ -1.05
SEC61A1-202ENST00000424880 A0A0B4J2C4 111 aa8.46□□□□□ -1.05
SEC61A1-202ENST00000424880 NPFFO15130 113 aa8.46□□□□□ -1.05
SEC61A1-202ENST00000424880 C9orf153Q5TBE3 101 aa8.46□□□□□ -1.05
SEC61A1-202ENST00000424880 C3orf22Q8N5N4 141 aa8.46□□□□□ -1.05
SEC61A1-202ENST00000424880 SDHAF1A6NFY7 115 aa8.46□□□□□ -1.06
SEC61A1-202ENST00000424880 FAM19A5Q7Z5A7 132 aaPredicted RBP8.46□□□□□ -1.06
SEC61A1-202ENST00000424880 DPM3Q9P2X0 92 aa8.46□□□□□ -1.06
SEC61A1-202ENST00000424880 KMT2BQ9UMN6 2715 aaPredicted RBP8.46□□□□□ -1.06
SEC61A1-202ENST00000424880 LY6LH3BQJ8 138 aa8.45□□□□□ -1.06
SEC61A1-202ENST00000424880 CD3EP07766 207 aa8.45□□□□□ -1.06
SEC61A1-202ENST00000424880 C9orf47Q6ZRZ4 202 aa8.45□□□□□ -1.06
SEC61A1-202ENST00000424880 ZFAND3Q9H8U3 227 aa8.45□□□□□ -1.06
SEC61A1-202ENST00000424880 E7EQL1 145 aa8.45□□□□□ -1.06
SEC61A1-202ENST00000424880 K7ENP7 123 aa8.45□□□□□ -1.06
SEC61A1-202ENST00000424880 IGKV3-20P01619 116 aa8.45□□□□□ -1.06
SEC61A1-202ENST00000424880 LINC00526Q96FQ7 95 aa8.45□□□□□ -1.06
SEC61A1-202ENST00000424880 EDA2RQ9HAV5 297 aa8.45□□□□□ -1.06
SEC61A1-202ENST00000424880 ACACBO00763 2458 aa8.45□□□□□ -1.06
SEC61A1-202ENST00000424880 UQCRQO14949 82 aa8.44□□□□□ -1.06
SEC61A1-202ENST00000424880 ATRXP46100 2492 aa8.44□□□□□ -1.06
SEC61A1-202ENST00000424880 A0A0G2JNJ9 132 aa8.44□□□□□ -1.06
SEC61A1-202ENST00000424880 RNASE3P12724 160 aaKnown RBP8.44□□□□□ -1.06
SEC61A1-202ENST00000424880 SUMO4Q6EEV6 95 aa8.44□□□□□ -1.06
SEC61A1-202ENST00000424880 TMEM101Q96IK0 257 aa8.44□□□□□ -1.06
SEC61A1-202ENST00000424880 Q9UFV3 132 aa8.44□□□□□ -1.06
SEC61A1-202ENST00000424880 HERVK_113P63121 156 aa8.44□□□□□ -1.06
SEC61A1-202ENST00000424880 VMO1Q7Z5L0 202 aa8.44□□□□□ -1.06
SEC61A1-202ENST00000424880 NUP37Q8NFH4 326 aa8.44□□□□□ -1.06
SEC61A1-202ENST00000424880 SMCR5Q8TEV8 140 aa8.44□□□□□ -1.06
SEC61A1-202ENST00000424880 ICOSQ9Y6W8 199 aa8.44□□□□□ -1.06
SEC61A1-202ENST00000424880 IGHV7-81A0A0B4J1V7 117 aa8.43□□□□□ -1.06
SEC61A1-202ENST00000424880 ZNF876PQ49A33 203 aa8.43□□□□□ -1.06
SEC61A1-202ENST00000424880 PAPPA-AS1Q5QFB9 102 aa8.43□□□□□ -1.06
SEC61A1-202ENST00000424880 ZFAND2AQ8N6M9 145 aa8.43□□□□□ -1.06
SEC61A1-202ENST00000424880 CCDC140Q96MF4 163 aa8.43□□□□□ -1.06
SEC61A1-202ENST00000424880 A0A0J9YXY3 114 aa8.43□□□□□ -1.06
SEC61A1-202ENST00000424880 NSUN5P1Q3KNT7 163 aa8.43□□□□□ -1.06
SEC61A1-202ENST00000424880 ZNF625Q96I27 306 aaPredicted RBP8.43□□□□□ -1.06
SEC61A1-202ENST00000424880 CYSTM1Q9H1C7 97 aa8.43□□□□□ -1.06
SEC61A1-202ENST00000424880 IGHV3-73A0A0B4J1V6 119 aa8.42□□□□□ -1.06
SEC61A1-202ENST00000424880 TRBV30A0A0K0K1B3 111 aa8.42□□□□□ -1.06
SEC61A1-202ENST00000424880 H3BT86 120 aa8.42□□□□□ -1.06
SEC61A1-202ENST00000424880 ATP5G1P05496 136 aa8.42□□□□□ -1.06
SEC61A1-202ENST00000424880 KAAG1Q9UBP8 84 aa8.42□□□□□ -1.06
SEC61A1-202ENST00000424880 ATP6V0E1O15342 81 aa8.42□□□□□ -1.06
SEC61A1-202ENST00000424880 TMEM219Q86XT9 240 aa8.42□□□□□ -1.06
SEC61A1-202ENST00000424880 I3L3M4 83 aa8.41□□□□□ -1.06
SEC61A1-202ENST00000424880 TRBV12-3P01733 135 aa8.41□□□□□ -1.06
SEC61A1-202ENST00000424880 HTN1P15515 57 aa8.41□□□□□ -1.06
SEC61A1-202ENST00000424880 UNQ9165/PRO28630Q6UXU0 137 aa8.41□□□□□ -1.06
SEC61A1-202ENST00000424880 METTL26Q96S19 204 aa8.41□□□□□ -1.06
SEC61A1-202ENST00000424880 RNF5Q99942 180 aa8.41□□□□□ -1.06
SEC61A1-202ENST00000424880 TMEM223A0PJW6 202 aa8.41□□□□□ -1.06
SEC61A1-202ENST00000424880 OR13C6PQ8NH95 151 aa8.41□□□□□ -1.06
SEC61A1-202ENST00000424880 IGHV3-30-3P0DP02 117 aa8.41□□□□□ -1.06
SEC61A1-202ENST00000424880 UCNP55089 124 aa8.41□□□□□ -1.06
SEC61A1-202ENST00000424880 UBTD1Q9HAC8 227 aa8.41□□□□□ -1.06
SEC61A1-202ENST00000424880 EDN2P20800 178 aa8.4□□□□□ -1.06
SEC61A1-202ENST00000424880 LINC00315P59091 139 aa8.4□□□□□ -1.06
SEC61A1-202ENST00000424880 TRAV12-2A0A075B6T6 113 aa8.4□□□□□ -1.07
SEC61A1-202ENST00000424880 TRAV21A0A0B4J279 112 aa8.4□□□□□ -1.07
SEC61A1-202ENST00000424880 NPBQ8NG41 125 aa8.4□□□□□ -1.07
SEC61A1-202ENST00000424880 LINC01560Q8TB33 94 aa8.4□□□□□ -1.07
SEC61A1-202ENST00000424880 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.39□□□□□ -1.07
SEC61A1-202ENST00000424880 IGHV3-11P01762 117 aa8.39□□□□□ -1.07
SEC61A1-202ENST00000424880 POLR2KP53803 58 aaKnown RBP8.39□□□□□ -1.07
SEC61A1-202ENST00000424880 RHOHQ15669 191 aa8.39□□□□□ -1.07
SEC61A1-202ENST00000424880 IGHV1-69DA0A0B4J2H0 117 aa8.39□□□□□ -1.07
SEC61A1-202ENST00000424880 KLK9Q9UKQ9 250 aa8.39□□□□□ -1.07
SEC61A1-202ENST00000424880 VCYO14598 125 aa8.39□□□□□ -1.07
SEC61A1-202ENST00000424880 LEPROTO15243 131 aa8.39□□□□□ -1.07
SEC61A1-202ENST00000424880 NXPH4O95158 308 aa8.39□□□□□ -1.07
SEC61A1-202ENST00000424880 ACYP1P07311 99 aa8.39□□□□□ -1.07
SEC61A1-202ENST00000424880 KIR2DL5BQ8NHK3 375 aa8.39□□□□□ -1.07
SEC61A1-202ENST00000424880 hADV29S1A0JD25 119 aa8.38□□□□□ -1.07
SEC61A1-202ENST00000424880 CRYGAP11844 174 aa8.38□□□□□ -1.07
SEC61A1-202ENST00000424880 Q9UF83 564 aa8.38□□□□□ -1.07
SEC61A1-202ENST00000424880 SPG11Q96JI7 2443 aa8.38□□□□□ -1.07
SEC61A1-202ENST00000424880 IGHV3OR16-10A0A075B7F0 116 aa8.37□□□□□ -1.07
SEC61A1-202ENST00000424880 PRM2P04554 102 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms