RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 KANTRA0A1W2PQU2 76 aa12.06□□□□□ -0.48
SREBF1-206ENST00000423161 HMSDA8MTL9 139 aa12.06□□□□□ -0.48
SREBF1-206ENST00000423161 BCL2L11O43521 198 aa12.06□□□□□ -0.48
SREBF1-206ENST00000423161 SSTP61278 116 aa12.06□□□□□ -0.48
SREBF1-206ENST00000423161 DEFB104AQ8WTQ1 72 aa12.06□□□□□ -0.48
SREBF1-206ENST00000423161 CHCHD5Q9BSY4 110 aa12.06□□□□□ -0.48
SREBF1-206ENST00000423161 CHAC1Q9BUX1 264 aa12.06□□□□□ -0.48
SREBF1-206ENST00000423161 A0A0D9SG52 128 aa12.05□□□□□ -0.48
SREBF1-206ENST00000423161 PKIAP61925 76 aa12.05□□□□□ -0.48
SREBF1-206ENST00000423161 TMUB2Q71RG4 321 aa12.05□□□□□ -0.48
SREBF1-206ENST00000423161 SMIM17P0DL12 118 aa12.04□□□□□ -0.48
SREBF1-206ENST00000423161 AP1S3Q96PC3 154 aa12.04□□□□□ -0.48
SREBF1-206ENST00000423161 HLA-DQA1P01909 254 aa12.03□□□□□ -0.48
SREBF1-206ENST00000423161 RPL35P42766 123 aaKnown RBP12.03□□□□□ -0.48
SREBF1-206ENST00000423161 EIF5AP63241 154 aaKnown RBP12.03□□□□□ -0.48
SREBF1-206ENST00000423161 TMEM97Q5BJF2 176 aa12.03□□□□□ -0.48
SREBF1-206ENST00000423161 CIRBP-AS1Q8TBR5 109 aa12.03□□□□□ -0.48
SREBF1-206ENST00000423161 VAX2Q9UIW0 290 aa12.03□□□□□ -0.48
SREBF1-206ENST00000423161 KRTAP29-1A8MX34 341 aaPredicted RBP12.02□□□□□ -0.49
SREBF1-206ENST00000423161 NTM-AS1Q6ZSK4 140 aa12.02□□□□□ -0.49
SREBF1-206ENST00000423161 DERL1Q9BUN8 251 aa12.02□□□□□ -0.49
SREBF1-206ENST00000423161 MANBALQ9NQG1 85 aa12.02□□□□□ -0.49
SREBF1-206ENST00000423161 KIF25-AS1Q9Y6Z4 181 aa12.02□□□□□ -0.49
SREBF1-206ENST00000423161 USP17L23D6RBM5 183 aa12.01□□□□□ -0.49
SREBF1-206ENST00000423161 MIAQ16674 131 aa12.01□□□□□ -0.49
SREBF1-206ENST00000423161 C11orf52Q96A22 123 aa12.01□□□□□ -0.49
SREBF1-206ENST00000423161 GNG13Q9P2W3 67 aa12.01□□□□□ -0.49
SREBF1-206ENST00000423161 CLPSL2Q6UWE3 100 aa12□□□□□ -0.49
SREBF1-206ENST00000423161 TRBV25-1A0A075B6N4 114 aa11.99□□□□□ -0.49
SREBF1-206ENST00000423161 MGPP08493 103 aa11.99□□□□□ -0.49
SREBF1-206ENST00000423161 GZMBP10144 247 aa11.99□□□□□ -0.49
SREBF1-206ENST00000423161 KRTAP10-4P60372 401 aaPredicted RBP11.99□□□□□ -0.49
SREBF1-206ENST00000423161 RBX1P62877 108 aa11.99□□□□□ -0.49
SREBF1-206ENST00000423161 CCL20P78556 96 aa11.99□□□□□ -0.49
SREBF1-206ENST00000423161 GAGE6Q13070 117 aa11.99□□□□□ -0.49
SREBF1-206ENST00000423161 CENPWQ5EE01 88 aa11.99□□□□□ -0.49
SREBF1-206ENST00000423161 TPPP3Q9BW30 176 aa11.99□□□□□ -0.49
SREBF1-206ENST00000423161 IGLV2-8P01709 118 aa11.98□□□□□ -0.49
SREBF1-206ENST00000423161 FER1L6-AS1Q8NA97 138 aa11.98□□□□□ -0.49
SREBF1-206ENST00000423161 DAZAP1Q96EP5 407 aaKnown RBP11.98□□□□□ -0.49
SREBF1-206ENST00000423161 PRR34Q9NV39 138 aa11.98□□□□□ -0.49
SREBF1-206ENST00000423161 PRSS1P07477 247 aa11.97□□□□□ -0.49
SREBF1-206ENST00000423161 IGLC6P0CF74 106 aa11.97□□□□□ -0.49
SREBF1-206ENST00000423161 RPS20P60866 119 aaKnown RBP11.97□□□□□ -0.49
SREBF1-206ENST00000423161 LINC00269Q8N2A0 174 aa11.97□□□□□ -0.49
SREBF1-206ENST00000423161 OR2D3Q8NGH3 330 aa11.97□□□□□ -0.49
SREBF1-206ENST00000423161 TRAV1-1A0A0B4J248 108 aa11.96□□□□□ -0.49
SREBF1-206ENST00000423161 IGHV1-24A0A0C4DH33 117 aa11.96□□□□□ -0.49
SREBF1-206ENST00000423161 H7C1H1 209 aa11.96□□□□□ -0.49
SREBF1-206ENST00000423161 M0QY20 66 aa11.96□□□□□ -0.49
SREBF1-206ENST00000423161 IQCJQ1A5X6 159 aa11.96□□□□□ -0.49
SREBF1-206ENST00000423161 C19orf71A6NCJ1 209 aa11.95□□□□□ -0.5
SREBF1-206ENST00000423161 CACNG7P62955 275 aa11.95□□□□□ -0.5
SREBF1-206ENST00000423161 SUMO4Q6EEV6 95 aa11.95□□□□□ -0.5
SREBF1-206ENST00000423161 RAB19A4D1S5 217 aa11.94□□□□□ -0.5
SREBF1-206ENST00000423161 TEX46H3BTG2 121 aa11.94□□□□□ -0.5
SREBF1-206ENST00000423161 GNG4P50150 75 aa11.94□□□□□ -0.5
SREBF1-206ENST00000423161 RAB5CP51148 216 aa11.94□□□□□ -0.5
SREBF1-206ENST00000423161 DGAT2L7PQ6IED9 249 aa11.94□□□□□ -0.5
SREBF1-206ENST00000423161 KRTAP26-1Q6PEX3 210 aa11.94□□□□□ -0.5
SREBF1-206ENST00000423161 XKRY2A2RUG3 117 aa11.93□□□□□ -0.5
SREBF1-206ENST00000423161 REG3AQ06141 175 aa11.93□□□□□ -0.5
SREBF1-206ENST00000423161 C9orf163Q8N9P6 203 aa11.93□□□□□ -0.5
SREBF1-206ENST00000423161 SMIM12Q96EX1 92 aa11.93□□□□□ -0.5
SREBF1-206ENST00000423161 IGLV10-54A0A075B6I4 117 aa11.92□□□□□ -0.5
SREBF1-206ENST00000423161 P01737 135 aa11.92□□□□□ -0.5
SREBF1-206ENST00000423161 NKX2-5P52952 324 aaPredicted RBP11.92□□□□□ -0.5
SREBF1-206ENST00000423161 MEF2BQ02080 365 aaPredicted RBP11.92□□□□□ -0.5
SREBF1-206ENST00000423161 EIF5AL1Q6IS14 154 aaKnown RBP11.92□□□□□ -0.5
SREBF1-206ENST00000423161 F2Z2F3 143 aa11.91□□□□□ -0.5
SREBF1-206ENST00000423161 PDE6DO43924 150 aa11.91□□□□□ -0.5
SREBF1-206ENST00000423161 TRGC1P0CF51 173 aa11.91□□□□□ -0.5
SREBF1-206ENST00000423161 RPL37AP61513 92 aaKnown RBP11.91□□□□□ -0.5
SREBF1-206ENST00000423161 RASL11AQ6T310 242 aa11.91□□□□□ -0.5
SREBF1-206ENST00000423161 LYZL1Q6UWQ5 148 aa11.91□□□□□ -0.5
SREBF1-206ENST00000423161 C20orf203Q8NBC4 194 aa11.91□□□□□ -0.5
SREBF1-206ENST00000423161 TMEM243Q9BU79 118 aa11.91□□□□□ -0.5
SREBF1-206ENST00000423161 TRBV20OR9-2A0A075B6H5 130 aa11.9□□□□□ -0.5
SREBF1-206ENST00000423161 OXTP01178 125 aa11.9□□□□□ -0.5
SREBF1-206ENST00000423161 IFNA1P01562 189 aa11.9□□□□□ -0.5
SREBF1-206ENST00000423161 SULT1A2P50226 295 aa11.9□□□□□ -0.5
SREBF1-206ENST00000423161 DPH3P1Q9H4G8 78 aa11.9□□□□□ -0.5
SREBF1-206ENST00000423161 MED9Q9NWA0 146 aa11.9□□□□□ -0.5
SREBF1-206ENST00000423161 CLRN3Q8NCR9 226 aa11.89□□□□□ -0.51
SREBF1-206ENST00000423161 NIT2Q9NQR4 276 aa11.89□□□□□ -0.51
SREBF1-206ENST00000423161 BIN3Q9NQY0 253 aa11.89□□□□□ -0.51
SREBF1-206ENST00000423161 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.89□□□□□ -0.51
SREBF1-206ENST00000423161 PKHD1L1Q86WI1 4243 aa11.89□□□□□ -0.51
SREBF1-206ENST00000423161 LRP1Q07954 4544 aaKnown RBP11.88□□□□□ -0.51
SREBF1-206ENST00000423161 IGLV4-60A0A075B6I1 120 aa11.88□□□□□ -0.51
SREBF1-206ENST00000423161 TRAV8-4A0A0B4J246 113 aa11.88□□□□□ -0.51
SREBF1-206ENST00000423161 A0A1B0GUV1 79 aa11.88□□□□□ -0.51
SREBF1-206ENST00000423161 BCL2P10415 239 aa11.88□□□□□ -0.51
SREBF1-206ENST00000423161 NTF3P20783 257 aa11.88□□□□□ -0.51
SREBF1-206ENST00000423161 PGLYRP4Q96LB8 373 aa11.88□□□□□ -0.51
SREBF1-206ENST00000423161 SDIM1Q6ZPB5 146 aa11.87□□□□□ -0.51
SREBF1-206ENST00000423161 GFRA4Q9GZZ7 299 aa11.87□□□□□ -0.51
SREBF1-206ENST00000423161 hDV102S1A0JD36 115 aa11.86□□□□□ -0.51
SREBF1-206ENST00000423161 PANO1I0J062 215 aa11.86□□□□□ -0.51
SREBF1-206ENST00000423161 UBE2L6O14933 153 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 439.2 ms