RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 A0A1B0GUT8 65 aa6.41□□□□□ -1.38
PDGFC-202ENST00000422544 CCL18P55774 89 aa6.41□□□□□ -1.38
PDGFC-202ENST00000422544 C10orf91Q5T1B1 145 aa6.41□□□□□ -1.38
PDGFC-202ENST00000422544 LYPD5Q6UWN5 251 aa6.41□□□□□ -1.38
PDGFC-202ENST00000422544 NEGR1Q7Z3B1 354 aa6.41□□□□□ -1.38
PDGFC-202ENST00000422544 ANAPC16Q96DE5 110 aa6.41□□□□□ -1.38
PDGFC-202ENST00000422544 DPH3P1Q9H4G8 78 aa6.41□□□□□ -1.38
PDGFC-202ENST00000422544 LINC00588Q9Y4M8 146 aa6.41□□□□□ -1.38
PDGFC-202ENST00000422544 RIGQ13278 110 aa6.4□□□□□ -1.38
PDGFC-202ENST00000422544 SMIM15Q7Z3B0 74 aa6.4□□□□□ -1.38
PDGFC-202ENST00000422544 SLC7A5P1Q8MH63 180 aa6.4□□□□□ -1.38
PDGFC-202ENST00000422544 CARHSP1Q9Y2V2 147 aaKnown RBP6.4□□□□□ -1.38
PDGFC-202ENST00000422544 TRBV10-1A0A0K0K1A3 114 aa6.39□□□□□ -1.39
PDGFC-202ENST00000422544 M0QY20 66 aa6.39□□□□□ -1.39
PDGFC-202ENST00000422544 FAM3BP58499 235 aaPredicted RBP6.39□□□□□ -1.39
PDGFC-202ENST00000422544 SUMO4Q6EEV6 95 aa6.39□□□□□ -1.39
PDGFC-202ENST00000422544 SH2D6Q7Z4S9 175 aa6.39□□□□□ -1.39
PDGFC-202ENST00000422544 ATP6V0E2Q8NHE4 81 aa6.39□□□□□ -1.39
PDGFC-202ENST00000422544 ZNRF2Q8NHG8 242 aa6.39□□□□□ -1.39
PDGFC-202ENST00000422544 TRAV26-2A0A0B4J265 109 aa6.38□□□□□ -1.39
PDGFC-202ENST00000422544 C7orf77A4D0Y5 90 aa6.38□□□□□ -1.39
PDGFC-202ENST00000422544 APOC3P02656 99 aa6.38□□□□□ -1.39
PDGFC-202ENST00000422544 LINC00694P0DN24 101 aa6.38□□□□□ -1.39
PDGFC-202ENST00000422544 CAMPP49913 170 aa6.38□□□□□ -1.39
PDGFC-202ENST00000422544 RPL36AP83881 106 aaKnown RBP6.38□□□□□ -1.39
PDGFC-202ENST00000422544 MRPL54Q6P161 138 aaKnown RBP6.38□□□□□ -1.39
PDGFC-202ENST00000422544 NEXN-AS1Q8NBZ9 246 aa6.38□□□□□ -1.39
PDGFC-202ENST00000422544 CLRN3Q8NCR9 226 aa6.38□□□□□ -1.39
PDGFC-202ENST00000422544 RPL36ALQ969Q0 106 aaKnown RBP6.38□□□□□ -1.39
PDGFC-202ENST00000422544 CTDSP1Q9GZU7 261 aa6.38□□□□□ -1.39
PDGFC-202ENST00000422544 TMEM191AQ9H0A3 160 aa6.38□□□□□ -1.39
PDGFC-202ENST00000422544 MRPS16Q9Y3D3 137 aaKnown RBP6.38□□□□□ -1.39
PDGFC-202ENST00000422544 IGLV2-18A0A075B6J9 118 aa6.37□□□□□ -1.39
PDGFC-202ENST00000422544 TRBV7-3A0A075B6L6 115 aa6.37□□□□□ -1.39
PDGFC-202ENST00000422544 AMN1Q8IY45 258 aa6.37□□□□□ -1.39
PDGFC-202ENST00000422544 GATD1Q8NB37 220 aa6.37□□□□□ -1.39
PDGFC-202ENST00000422544 RNF185Q96GF1 192 aa6.37□□□□□ -1.39
PDGFC-202ENST00000422544 GTSF1LQ9H1H1 148 aa6.37□□□□□ -1.39
PDGFC-202ENST00000422544 A0A1B0GW15 77 aa6.36□□□□□ -1.39
PDGFC-202ENST00000422544 A0A1B0GXF2 115 aa6.36□□□□□ -1.39
PDGFC-202ENST00000422544 H7C1H1 209 aa6.36□□□□□ -1.39
PDGFC-202ENST00000422544 RAB4AP20338 218 aa6.36□□□□□ -1.39
PDGFC-202ENST00000422544 TIRAPP58753 221 aa6.36□□□□□ -1.39
PDGFC-202ENST00000422544 UBE2D3P61077 147 aa6.36□□□□□ -1.39
PDGFC-202ENST00000422544 UBE2D2P62837 147 aa6.36□□□□□ -1.39
PDGFC-202ENST00000422544 NDUFA5Q16718 116 aa6.36□□□□□ -1.39
PDGFC-202ENST00000422544 RASL11AQ6T310 242 aa6.36□□□□□ -1.39
PDGFC-202ENST00000422544 IMMP2LQ96T52 175 aa6.36□□□□□ -1.39
PDGFC-202ENST00000422544 UPK3BQ9BT76 320 aa6.36□□□□□ -1.39
PDGFC-202ENST00000422544 Q9H8V8 135 aa6.36□□□□□ -1.39
PDGFC-202ENST00000422544 RPS10P5Q9NQ39 176 aa6.36□□□□□ -1.39
PDGFC-202ENST00000422544 TNFRSF18Q9Y5U5 241 aa6.36□□□□□ -1.39
PDGFC-202ENST00000422544 A0A087WWC5 75 aa6.35□□□□□ -1.39
PDGFC-202ENST00000422544 IGHV3-38A0A0C4DH36 116 aa6.35□□□□□ -1.39
PDGFC-202ENST00000422544 M0R2N4 97 aa6.35□□□□□ -1.39
PDGFC-202ENST00000422544 GAS8-AS1O95177 125 aa6.35□□□□□ -1.39
PDGFC-202ENST00000422544 HBBP68871 147 aa6.35□□□□□ -1.39
PDGFC-202ENST00000422544 RHEBQ15382 184 aa6.35□□□□□ -1.39
PDGFC-202ENST00000422544 SVBPQ8N300 66 aa6.35□□□□□ -1.39
PDGFC-202ENST00000422544 RPL39LQ96EH5 51 aaKnown RBP6.35□□□□□ -1.39
PDGFC-202ENST00000422544 BTF3L4Q96K17 158 aa6.35□□□□□ -1.39
PDGFC-202ENST00000422544 DNAJC30Q96LL9 226 aa6.35□□□□□ -1.39
PDGFC-202ENST00000422544 NIT2Q9NQR4 276 aa6.35□□□□□ -1.39
PDGFC-202ENST00000422544 TMEM242Q9NWH2 141 aa6.35□□□□□ -1.39
PDGFC-202ENST00000422544 APOBP04114 4563 aaKnown RBP6.34□□□□□ -1.39
PDGFC-202ENST00000422544 LRP1BQ9NZR2 4599 aa6.34□□□□□ -1.39
PDGFC-202ENST00000422544 SMKR1H3BMG3 65 aa6.34□□□□□ -1.39
PDGFC-202ENST00000422544 SNAPINO95295 136 aa6.34□□□□□ -1.39
PDGFC-202ENST00000422544 S100A8P05109 93 aa6.34□□□□□ -1.39
PDGFC-202ENST00000422544 OR10J3Q5JRS4 329 aa6.34□□□□□ -1.39
PDGFC-202ENST00000422544 LELP1Q5T871 98 aa6.34□□□□□ -1.39
PDGFC-202ENST00000422544 FAM104BQ5XKR9 115 aa6.34□□□□□ -1.39
PDGFC-202ENST00000422544 KCNIP4Q6PIL6 250 aa6.34□□□□□ -1.39
PDGFC-202ENST00000422544 ATP5L2Q7Z4Y8 100 aa6.34□□□□□ -1.39
PDGFC-202ENST00000422544 WFDC10BQ8IUB3 73 aa6.34□□□□□ -1.39
PDGFC-202ENST00000422544 URGCP-MRPS24S4R325 110 aa6.34□□□□□ -1.39
PDGFC-202ENST00000422544 TRAV8-6A0A0B4J262 113 aa6.33□□□□□ -1.4
PDGFC-202ENST00000422544 SIVA1O15304 175 aa6.33□□□□□ -1.4
PDGFC-202ENST00000422544 S100PP25815 95 aa6.33□□□□□ -1.4
PDGFC-202ENST00000422544 MRPL51Q4U2R6 128 aaKnown RBP6.33□□□□□ -1.4
PDGFC-202ENST00000422544 DAZ4Q86SG3 579 aaKnown RBP6.33□□□□□ -1.4
PDGFC-202ENST00000422544 DEFB104AQ8WTQ1 72 aa6.33□□□□□ -1.4
PDGFC-202ENST00000422544 MRAP2Q96G30 205 aa6.33□□□□□ -1.4
PDGFC-202ENST00000422544 DAZ3Q9NR90 486 aaKnown RBP6.33□□□□□ -1.4
PDGFC-202ENST00000422544 NBDYA0A0U1RRE5 68 aa6.32□□□□□ -1.4
PDGFC-202ENST00000422544 NCR2O95944 276 aa6.32□□□□□ -1.4
PDGFC-202ENST00000422544 RPS10P46783 165 aaKnown RBP6.32□□□□□ -1.4
PDGFC-202ENST00000422544 ATRAIDQ6UW56 229 aa6.32□□□□□ -1.4
PDGFC-202ENST00000422544 NTM-AS1Q6ZSK4 140 aa6.32□□□□□ -1.4
PDGFC-202ENST00000422544 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.32□□□□□ -1.4
PDGFC-202ENST00000422544 FRZBQ92765 325 aa6.32□□□□□ -1.4
PDGFC-202ENST00000422544 TRAV9-1A0A075B6T8 112 aa6.31□□□□□ -1.4
PDGFC-202ENST00000422544 TRBV6-8A0A0A6YYG3 113 aa6.31□□□□□ -1.4
PDGFC-202ENST00000422544 TRBV6-5A0A0K0K1A5 114 aa6.31□□□□□ -1.4
PDGFC-202ENST00000422544 CKS2P33552 79 aa6.31□□□□□ -1.4
PDGFC-202ENST00000422544 Q6ZR54 194 aa6.31□□□□□ -1.4
PDGFC-202ENST00000422544 ST20Q9HBF5 79 aa6.31□□□□□ -1.4
PDGFC-202ENST00000422544 SDHAF1A6NFY7 115 aa6.3□□□□□ -1.4
PDGFC-202ENST00000422544 D6R8Y8 96 aa6.3□□□□□ -1.4
PDGFC-202ENST00000422544 IGHV3-30P01768 117 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 207.4 ms