RNA–Protein interactions for RNA: ENST00000420316.6

EGFR-204, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-204ENST00000420316 TMEM191AQ9H0A3 160 aa13.95□□□□□ -0.18
EGFR-204ENST00000420316 RPL36AP83881 106 aaKnown RBP13.94□□□□□ -0.18
EGFR-204ENST00000420316 NDUFA5Q16718 116 aa13.94□□□□□ -0.18
EGFR-204ENST00000420316 RPL36ALQ969Q0 106 aaKnown RBP13.94□□□□□ -0.18
EGFR-204ENST00000420316 UPK3BQ9BT76 320 aa13.94□□□□□ -0.18
EGFR-204ENST00000420316 MRPS16Q9Y3D3 137 aaKnown RBP13.94□□□□□ -0.18
EGFR-204ENST00000420316 A0A1B0GXF2 115 aa13.93□□□□□ -0.18
EGFR-204ENST00000420316 DEFB104AQ8WTQ1 72 aa13.93□□□□□ -0.18
EGFR-204ENST00000420316 RPL39LQ96EH5 51 aaKnown RBP13.93□□□□□ -0.18
EGFR-204ENST00000420316 URGCP-MRPS24S4R325 110 aa13.93□□□□□ -0.18
EGFR-204ENST00000420316 TRBV7-3A0A075B6L6 115 aa13.92□□□□□ -0.18
EGFR-204ENST00000420316 TRBV10-1A0A0K0K1A3 114 aa13.92□□□□□ -0.18
EGFR-204ENST00000420316 SMKR1H3BMG3 65 aa13.92□□□□□ -0.18
EGFR-204ENST00000420316 RAB4AP20338 218 aa13.92□□□□□ -0.18
EGFR-204ENST00000420316 HBBP68871 147 aa13.92□□□□□ -0.18
EGFR-204ENST00000420316 RHEBQ15382 184 aa13.92□□□□□ -0.18
EGFR-204ENST00000420316 RASL11AQ6T310 242 aa13.92□□□□□ -0.18
EGFR-204ENST00000420316 M0R2N4 97 aa13.92□□□□□ -0.18
EGFR-204ENST00000420316 NCR2O95944 276 aa13.92□□□□□ -0.18
EGFR-204ENST00000420316 TIRAPP58753 221 aa13.92□□□□□ -0.18
EGFR-204ENST00000420316 UBE2D3P61077 147 aa13.92□□□□□ -0.18
EGFR-204ENST00000420316 UBE2D2P62837 147 aa13.92□□□□□ -0.18
EGFR-204ENST00000420316 ATRAIDQ6UW56 229 aa13.92□□□□□ -0.18
EGFR-204ENST00000420316 SVBPQ8N300 66 aa13.91□□□□□ -0.18
EGFR-204ENST00000420316 H7C1H1 209 aa13.9□□□□□ -0.18
EGFR-204ENST00000420316 WFDC10BQ8IUB3 73 aa13.9□□□□□ -0.18
EGFR-204ENST00000420316 GTSF1LQ9H1H1 148 aa13.9□□□□□ -0.18
EGFR-204ENST00000420316 TNFRSF18Q9Y5U5 241 aa13.9□□□□□ -0.18
EGFR-204ENST00000420316 A0A087WWC5 75 aa13.89□□□□□ -0.19
EGFR-204ENST00000420316 SNAPINO95295 136 aa13.89□□□□□ -0.19
EGFR-204ENST00000420316 FAM104BQ5XKR9 115 aa13.89□□□□□ -0.19
EGFR-204ENST00000420316 Q9H8V8 135 aa13.89□□□□□ -0.19
EGFR-204ENST00000420316 A0A1B0GW15 77 aa13.88□□□□□ -0.19
EGFR-204ENST00000420316 RPS10P46783 165 aaKnown RBP13.88□□□□□ -0.19
EGFR-204ENST00000420316 MRPL51Q4U2R6 128 aaKnown RBP13.88□□□□□ -0.19
EGFR-204ENST00000420316 KCNIP4Q6PIL6 250 aa13.88□□□□□ -0.19
EGFR-204ENST00000420316 BTF3L4Q96K17 158 aa13.88□□□□□ -0.19
EGFR-204ENST00000420316 NIT2Q9NQR4 276 aa13.88□□□□□ -0.19
EGFR-204ENST00000420316 ATP5L2Q7Z4Y8 100 aa13.88□□□□□ -0.19
EGFR-204ENST00000420316 IMMP2LQ96T52 175 aa13.88□□□□□ -0.19
EGFR-204ENST00000420316 OR10J3Q5JRS4 329 aa13.87□□□□□ -0.19
EGFR-204ENST00000420316 TMEM242Q9NWH2 141 aa13.87□□□□□ -0.19
EGFR-204ENST00000420316 S100PP25815 95 aa13.86□□□□□ -0.19
EGFR-204ENST00000420316 DNAJC30Q96LL9 226 aa13.86□□□□□ -0.19
EGFR-204ENST00000420316 S100A8P05109 93 aa13.85□□□□□ -0.19
EGFR-204ENST00000420316 LELP1Q5T871 98 aa13.84□□□□□ -0.19
EGFR-204ENST00000420316 Q6ZR54 194 aa13.84□□□□□ -0.19
EGFR-204ENST00000420316 SIVA1O15304 175 aa13.83□□□□□ -0.19
EGFR-204ENST00000420316 Q8N3U1 123 aa13.83□□□□□ -0.19
EGFR-204ENST00000420316 MRAP2Q96G30 205 aa13.83□□□□□ -0.19
EGFR-204ENST00000420316 NBDYA0A0U1RRE5 68 aa13.83□□□□□ -0.2
EGFR-204ENST00000420316 NTM-AS1Q6ZSK4 140 aa13.83□□□□□ -0.2
EGFR-204ENST00000420316 TGIF2-C20orf24A0A0A6YYL0 155 aa13.82□□□□□ -0.2
EGFR-204ENST00000420316 D6R8Y8 96 aa13.82□□□□□ -0.2
EGFR-204ENST00000420316 CKS2P33552 79 aa13.82□□□□□ -0.2
EGFR-204ENST00000420316 KRTAP1-5Q9BYS1 174 aa13.82□□□□□ -0.2
EGFR-204ENST00000420316 TRAV8-6A0A0B4J262 113 aa13.81□□□□□ -0.2
EGFR-204ENST00000420316 TMEM136Q6ZRR5 245 aa13.81□□□□□ -0.2
EGFR-204ENST00000420316 DAZ4Q86SG3 579 aaKnown RBP13.81□□□□□ -0.2
EGFR-204ENST00000420316 NRACQ8N912 160 aa13.81□□□□□ -0.2
EGFR-204ENST00000420316 DAZ3Q9NR90 486 aaKnown RBP13.81□□□□□ -0.2
EGFR-204ENST00000420316 SDHAF1A6NFY7 115 aa13.8□□□□□ -0.2
EGFR-204ENST00000420316 IGHV3-30P01768 117 aa13.8□□□□□ -0.2
EGFR-204ENST00000420316 IGHV3-33P01772 117 aa13.8□□□□□ -0.2
EGFR-204ENST00000420316 IGHV3-30-3P0DP02 117 aa13.8□□□□□ -0.2
EGFR-204ENST00000420316 IGHV3-30-5P0DP03 117 aa13.8□□□□□ -0.2
EGFR-204ENST00000420316 TTC32Q5I0X7 151 aa13.8□□□□□ -0.2
EGFR-204ENST00000420316 FRZBQ92765 325 aa13.8□□□□□ -0.2
EGFR-204ENST00000420316 TRAV9-1A0A075B6T8 112 aa13.79□□□□□ -0.2
EGFR-204ENST00000420316 TRBV6-8A0A0A6YYG3 113 aa13.79□□□□□ -0.2
EGFR-204ENST00000420316 CBLN2Q8IUK8 224 aa13.79□□□□□ -0.2
EGFR-204ENST00000420316 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.79□□□□□ -0.2
EGFR-204ENST00000420316 ST20Q9HBF5 79 aa13.79□□□□□ -0.2
EGFR-204ENST00000420316 ELOBQ15370 118 aa13.79□□□□□ -0.2
EGFR-204ENST00000420316 DNAH2Q9P225 4427 aa13.78□□□□□ -0.2
EGFR-204ENST00000420316 TRBV6-5A0A0K0K1A5 114 aa13.78□□□□□ -0.2
EGFR-204ENST00000420316 K7EP13 123 aa13.78□□□□□ -0.2
EGFR-204ENST00000420316 NPYP01303 97 aa13.78□□□□□ -0.2
EGFR-204ENST00000420316 DNAH10OSP0CZ25 163 aa13.78□□□□□ -0.2
EGFR-204ENST00000420316 KIAA1644Q3SXP7 199 aa13.78□□□□□ -0.2
EGFR-204ENST00000420316 DNAH10Q8IVF4 4471 aa13.77□□□□□ -0.2
EGFR-204ENST00000420316 PMCHP20382 165 aa13.77□□□□□ -0.21
EGFR-204ENST00000420316 TMEM70Q9BUB7 260 aa13.77□□□□□ -0.21
EGFR-204ENST00000420316 TNFRSF6BO95407 300 aa13.76□□□□□ -0.21
EGFR-204ENST00000420316 TRAV9-2A0A087WT02 112 aa13.75□□□□□ -0.21
EGFR-204ENST00000420316 COTL1Q14019 142 aa13.75□□□□□ -0.21
EGFR-204ENST00000420316 TMEM97Q5BJF2 176 aa13.75□□□□□ -0.21
EGFR-204ENST00000420316 PRELID3AQ96N28 172 aa13.75□□□□□ -0.21
EGFR-204ENST00000420316 CHCHD5Q9BSY4 110 aa13.75□□□□□ -0.21
EGFR-204ENST00000420316 POLR2KP53803 58 aaKnown RBP13.75□□□□□ -0.21
EGFR-204ENST00000420316 GAGE6Q13070 117 aa13.75□□□□□ -0.21
EGFR-204ENST00000420316 LINC01556Q5JQF7 62 aa13.75□□□□□ -0.21
EGFR-204ENST00000420316 TRBV25-1A0A075B6N4 114 aa13.74□□□□□ -0.21
EGFR-204ENST00000420316 IGHV1-24A0A0C4DH33 117 aa13.74□□□□□ -0.21
EGFR-204ENST00000420316 TMEM262E9PQX1 116 aa13.74□□□□□ -0.21
EGFR-204ENST00000420316 BTF3P20290 206 aaKnown RBP13.74□□□□□ -0.21
EGFR-204ENST00000420316 SUMO2P61956 95 aaKnown RBP13.74□□□□□ -0.21
EGFR-204ENST00000420316 NIT1Q86X76 327 aa13.74□□□□□ -0.21
EGFR-204ENST00000420316 ORMDL3Q8N138 153 aa13.74□□□□□ -0.21
EGFR-204ENST00000420316 I3L3M4 83 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms