RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 TM2D2Q9BX73 214 aa7.29□□□□□ -1.24
SSBP3-206ENST00000420121 KIF25-AS1Q9Y6Z4 181 aa7.29□□□□□ -1.24
SSBP3-206ENST00000420121 TRBV7-3A0A075B6L6 115 aa7.28□□□□□ -1.24
SSBP3-206ENST00000420121 TRAV8-3A0A0A6YYJ7 113 aa7.28□□□□□ -1.24
SSBP3-206ENST00000420121 MUC21A0A0G2JKD1 596 aa7.28□□□□□ -1.24
SSBP3-206ENST00000420121 MUC21A0A140T8X8 626 aa7.28□□□□□ -1.24
SSBP3-206ENST00000420121 SMR3BP02814 79 aaPredicted RBP7.28□□□□□ -1.24
SSBP3-206ENST00000420121 EIF5AP63241 154 aaKnown RBP7.28□□□□□ -1.24
SSBP3-206ENST00000420121 CHTOPQ9Y3Y2 248 aaKnown RBP7.28□□□□□ -1.24
SSBP3-206ENST00000420121 MYCBP2O75592 4640 aa7.28□□□□□ -1.24
SSBP3-206ENST00000420121 FLG2Q5D862 2391 aaPredicted RBP7.27□□□□□ -1.24
SSBP3-206ENST00000420121 LECT2O14960 151 aa7.27□□□□□ -1.25
SSBP3-206ENST00000420121 RAB4BP61018 213 aa7.27□□□□□ -1.25
SSBP3-206ENST00000420121 RPL36AP83881 106 aaKnown RBP7.27□□□□□ -1.25
SSBP3-206ENST00000420121 Q6ZSA8 131 aa7.27□□□□□ -1.25
SSBP3-206ENST00000420121 RPL36ALQ969Q0 106 aaKnown RBP7.27□□□□□ -1.25
SSBP3-206ENST00000420121 MANBALQ9NQG1 85 aa7.27□□□□□ -1.25
SSBP3-206ENST00000420121 GNG13Q9P2W3 67 aa7.27□□□□□ -1.25
SSBP3-206ENST00000420121 KLK12Q9UKR0 248 aa7.27□□□□□ -1.25
SSBP3-206ENST00000420121 C19orf71A6NCJ1 209 aa7.26□□□□□ -1.25
SSBP3-206ENST00000420121 IGLC6P0CF74 106 aa7.26□□□□□ -1.25
SSBP3-206ENST00000420121 SULT1A2P50226 295 aa7.26□□□□□ -1.25
SSBP3-206ENST00000420121 ODF1Q14990 250 aa7.26□□□□□ -1.25
SSBP3-206ENST00000420121 MAJINQ3KP22 176 aa7.26□□□□□ -1.25
SSBP3-206ENST00000420121 TOR2AQ5JU69 321 aa7.26□□□□□ -1.25
SSBP3-206ENST00000420121 ATRAIDQ6UW56 229 aa7.26□□□□□ -1.25
SSBP3-206ENST00000420121 TCTE3Q8IZS6 198 aa7.26□□□□□ -1.25
SSBP3-206ENST00000420121 BAALCQ8WXS3 180 aa7.26□□□□□ -1.25
SSBP3-206ENST00000420121 CHCHD7Q9BUK0 85 aa7.26□□□□□ -1.25
SSBP3-206ENST00000420121 CBY1Q9Y3M2 126 aa7.26□□□□□ -1.25
SSBP3-206ENST00000420121 DMBT1Q9UGM3 2413 aaPredicted RBP7.26□□□□□ -1.25
SSBP3-206ENST00000420121 TRBV20OR9-2A0A075B6H5 130 aa7.25□□□□□ -1.25
SSBP3-206ENST00000420121 TRBV6-8A0A0A6YYG3 113 aa7.25□□□□□ -1.25
SSBP3-206ENST00000420121 RAB19A4D1S5 217 aa7.25□□□□□ -1.25
SSBP3-206ENST00000420121 H3BS24 57 aa7.25□□□□□ -1.25
SSBP3-206ENST00000420121 C1QBP02746 253 aa7.25□□□□□ -1.25
SSBP3-206ENST00000420121 INAFM2P0DMQ5 153 aa7.25□□□□□ -1.25
SSBP3-206ENST00000420121 GZMBP10144 247 aa7.25□□□□□ -1.25
SSBP3-206ENST00000420121 RAB5CP51148 216 aa7.25□□□□□ -1.25
SSBP3-206ENST00000420121 ZNF56Q15929 161 aa7.25□□□□□ -1.25
SSBP3-206ENST00000420121 CENPWQ5EE01 88 aa7.25□□□□□ -1.25
SSBP3-206ENST00000420121 NTM-AS1Q6ZSK4 140 aa7.25□□□□□ -1.25
SSBP3-206ENST00000420121 FRZBQ92765 325 aa7.25□□□□□ -1.25
SSBP3-206ENST00000420121 VAX2Q9UIW0 290 aa7.25□□□□□ -1.25
SSBP3-206ENST00000420121 RBFOX3A6NFN3 312 aa7.24□□□□□ -1.25
SSBP3-206ENST00000420121 COTL1Q14019 142 aa7.24□□□□□ -1.25
SSBP3-206ENST00000420121 MPV17L2Q567V2 206 aa7.24□□□□□ -1.25
SSBP3-206ENST00000420121 SPANXN1Q5VSR9 72 aa7.24□□□□□ -1.25
SSBP3-206ENST00000420121 ENHOQ6UWT2 76 aa7.24□□□□□ -1.25
SSBP3-206ENST00000420121 UBE2WQ96B02 151 aa7.24□□□□□ -1.25
SSBP3-206ENST00000420121 URGCP-MRPS24S4R325 110 aa7.24□□□□□ -1.25
SSBP3-206ENST00000420121 HERC1Q15751 4861 aa7.24□□□□□ -1.25
SSBP3-206ENST00000420121 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.23□□□□□ -1.25
SSBP3-206ENST00000420121 IGKV2D-24A0A075B6R9 120 aa7.23□□□□□ -1.25
SSBP3-206ENST00000420121 A0A087WX48 190 aa7.23□□□□□ -1.25
SSBP3-206ENST00000420121 ZNF561-AS1K7EIQ3 104 aa7.23□□□□□ -1.25
SSBP3-206ENST00000420121 MEF2BQ02080 365 aaPredicted RBP7.23□□□□□ -1.25
SSBP3-206ENST00000420121 LINC01620Q4KN68 170 aa7.23□□□□□ -1.25
SSBP3-206ENST00000420121 COX11Q9Y6N1 276 aa7.23□□□□□ -1.25
SSBP3-206ENST00000420121 M0QY20 66 aa7.22□□□□□ -1.25
SSBP3-206ENST00000420121 XP32Q5T750 250 aa7.22□□□□□ -1.25
SSBP3-206ENST00000420121 Q6ZNX1 250 aa7.22□□□□□ -1.25
SSBP3-206ENST00000420121 OR2D3Q8NGH3 330 aa7.22□□□□□ -1.25
SSBP3-206ENST00000420121 RMI2Q96E14 147 aa7.22□□□□□ -1.25
SSBP3-206ENST00000420121 SMIM12Q96EX1 92 aa7.22□□□□□ -1.25
SSBP3-206ENST00000420121 AP1S3Q96PC3 154 aa7.22□□□□□ -1.25
SSBP3-206ENST00000420121 CDIP1Q9H305 208 aa7.22□□□□□ -1.25
SSBP3-206ENST00000420121 F5H697 171 aa7.21□□□□□ -1.26
SSBP3-206ENST00000420121 BCL2P10415 239 aa7.21□□□□□ -1.26
SSBP3-206ENST00000420121 ELOBQ15370 118 aa7.21□□□□□ -1.26
SSBP3-206ENST00000420121 EIF5AL1Q6IS14 154 aaKnown RBP7.21□□□□□ -1.26
SSBP3-206ENST00000420121 Q8N976 141 aa7.21□□□□□ -1.26
SSBP3-206ENST00000420121 FER1L6-AS1Q8NA97 138 aa7.21□□□□□ -1.26
SSBP3-206ENST00000420121 TEX46H3BTG2 121 aa7.2□□□□□ -1.26
SSBP3-206ENST00000420121 PDE6DO43924 150 aa7.2□□□□□ -1.26
SSBP3-206ENST00000420121 GNG4P50150 75 aa7.2□□□□□ -1.26
SSBP3-206ENST00000420121 RPS20P60866 119 aaKnown RBP7.2□□□□□ -1.26
SSBP3-206ENST00000420121 Q0VG73 95 aa7.2□□□□□ -1.26
SSBP3-206ENST00000420121 SUMO4Q6EEV6 95 aa7.2□□□□□ -1.26
SSBP3-206ENST00000420121 KRTAP26-1Q6PEX3 210 aa7.2□□□□□ -1.26
SSBP3-206ENST00000420121 C9orf62Q8N4C0 152 aa7.2□□□□□ -1.26
SSBP3-206ENST00000420121 C15orf54Q8N8G6 183 aa7.2□□□□□ -1.26
SSBP3-206ENST00000420121 MED9Q9NWA0 146 aa7.2□□□□□ -1.26
SSBP3-206ENST00000420121 TMEM262E9PQX1 116 aa7.19□□□□□ -1.26
SSBP3-206ENST00000420121 GATCO43716 136 aaKnown RBP7.19□□□□□ -1.26
SSBP3-206ENST00000420121 SMIM17P0DL12 118 aa7.19□□□□□ -1.26
SSBP3-206ENST00000420121 RAB14P61106 215 aa7.19□□□□□ -1.26
SSBP3-206ENST00000420121 IQCJQ1A5X6 159 aa7.19□□□□□ -1.26
SSBP3-206ENST00000420121 LYZL1Q6UWQ5 148 aa7.19□□□□□ -1.26
SSBP3-206ENST00000420121 NUDT10Q8NFP7 164 aa7.19□□□□□ -1.26
SSBP3-206ENST00000420121 DAZAP1Q96EP5 407 aaKnown RBP7.19□□□□□ -1.26
SSBP3-206ENST00000420121 NUDT11Q96G61 164 aa7.19□□□□□ -1.26
SSBP3-206ENST00000420121 CHCHD5Q9BSY4 110 aa7.19□□□□□ -1.26
SSBP3-206ENST00000420121 TPPP3Q9BW30 176 aa7.19□□□□□ -1.26
SSBP3-206ENST00000420121 PRR34Q9NV39 138 aa7.19□□□□□ -1.26
SSBP3-206ENST00000420121 K7EN84 100 aa7.18□□□□□ -1.26
SSBP3-206ENST00000420121 IFNA1P01562 189 aa7.18□□□□□ -1.26
SSBP3-206ENST00000420121 P01737 135 aa7.18□□□□□ -1.26
SSBP3-206ENST00000420121 ANGP03950 147 aaKnown RBP7.18□□□□□ -1.26
SSBP3-206ENST00000420121 MGPP08493 103 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms