RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 RPL35AP18077 110 aaKnown RBP2.73□□□□□ -1.97
HMGB3P20-201ENST00000417997 CKS2P33552 79 aa2.73□□□□□ -1.97
HMGB3P20-201ENST00000417997 S100A12P80511 92 aa2.73□□□□□ -1.97
HMGB3P20-201ENST00000417997 Q0VG73 95 aa2.73□□□□□ -1.97
HMGB3P20-201ENST00000417997 IQCJQ1A5X6 159 aa2.73□□□□□ -1.97
HMGB3P20-201ENST00000417997 COA6Q5JTJ3 125 aaKnown RBP2.73□□□□□ -1.97
HMGB3P20-201ENST00000417997 FAM104BQ5XKR9 115 aa2.73□□□□□ -1.97
HMGB3P20-201ENST00000417997 MORN3Q6PF18 240 aaPredicted RBP2.73□□□□□ -1.97
HMGB3P20-201ENST00000417997 PET117Q6UWS5 81 aa2.73□□□□□ -1.97
HMGB3P20-201ENST00000417997 AMTNQ6UX39 209 aa2.73□□□□□ -1.97
HMGB3P20-201ENST00000417997 Q6ZQT7 251 aa2.73□□□□□ -1.97
HMGB3P20-201ENST00000417997 ZNF493Q6ZR52 646 aa2.73□□□□□ -1.97
HMGB3P20-201ENST00000417997 FA2HQ7L5A8 372 aa2.73□□□□□ -1.97
HMGB3P20-201ENST00000417997 AMN1Q8IY45 258 aa2.73□□□□□ -1.97
HMGB3P20-201ENST00000417997 ORMDL3Q8N138 153 aa2.73□□□□□ -1.97
HMGB3P20-201ENST00000417997 TMEM256Q8N2U0 113 aa2.73□□□□□ -1.97
HMGB3P20-201ENST00000417997 C18orf32Q8TCD1 76 aa2.73□□□□□ -1.97
HMGB3P20-201ENST00000417997 TMEM158Q8WZ71 300 aa2.73□□□□□ -1.97
HMGB3P20-201ENST00000417997 PACRGQ96M98 296 aaPredicted RBP2.73□□□□□ -1.97
HMGB3P20-201ENST00000417997 PRELID3AQ96N28 172 aa2.73□□□□□ -1.97
HMGB3P20-201ENST00000417997 LINC01587Q99440 93 aa2.73□□□□□ -1.97
HMGB3P20-201ENST00000417997 ALKBH7Q9BT30 221 aaPredicted RBP2.73□□□□□ -1.97
HMGB3P20-201ENST00000417997 CNFNQ9BYD5 112 aa2.73□□□□□ -1.97
HMGB3P20-201ENST00000417997 TMEM191AQ9H0A3 160 aa2.73□□□□□ -1.97
HMGB3P20-201ENST00000417997 MAP1LC3AQ9H492 121 aa2.73□□□□□ -1.97
HMGB3P20-201ENST00000417997 DPH3P1Q9H4G8 78 aa2.73□□□□□ -1.97
HMGB3P20-201ENST00000417997 ZMAT5Q9UDW3 170 aaKnown RBP2.73□□□□□ -1.97
HMGB3P20-201ENST00000417997 GOLT1BQ9Y3E0 138 aa2.73□□□□□ -1.97
HMGB3P20-201ENST00000417997 FASNP49327 2511 aaKnown RBP2.72□□□□□ -1.97
HMGB3P20-201ENST00000417997 IGHV3-16A0A0C4DH30 117 aa2.72□□□□□ -1.97
HMGB3P20-201ENST00000417997 EPM2AB3EWF7 344 aa2.72□□□□□ -1.97
HMGB3P20-201ENST00000417997 GNRH2O43555 120 aa2.72□□□□□ -1.97
HMGB3P20-201ENST00000417997 ZNF324O75467 553 aaPredicted RBP2.72□□□□□ -1.97
HMGB3P20-201ENST00000417997 CDK2AP2O75956 126 aa2.72□□□□□ -1.97
HMGB3P20-201ENST00000417997 PPBPP02775 128 aa2.72□□□□□ -1.97
HMGB3P20-201ENST00000417997 SMIM6P0DI80 62 aa2.72□□□□□ -1.97
HMGB3P20-201ENST00000417997 RNASE3P12724 160 aaKnown RBP2.72□□□□□ -1.97
HMGB3P20-201ENST00000417997 ZNF56Q15929 161 aa2.72□□□□□ -1.97
HMGB3P20-201ENST00000417997 TDRG1Q3Y452 100 aa2.72□□□□□ -1.97
HMGB3P20-201ENST00000417997 MRPL51Q4U2R6 128 aaKnown RBP2.72□□□□□ -1.97
HMGB3P20-201ENST00000417997 DNLZQ5SXM8 178 aa2.72□□□□□ -1.97
HMGB3P20-201ENST00000417997 LCE3EQ5T5B0 92 aa2.72□□□□□ -1.97
HMGB3P20-201ENST00000417997 FAM74A4Q5TZK3 123 aa2.72□□□□□ -1.97
HMGB3P20-201ENST00000417997 LINC00612Q8N6U2 182 aa2.72□□□□□ -1.97
HMGB3P20-201ENST00000417997 OR10D4PQ8NGN7 298 aa2.72□□□□□ -1.97
HMGB3P20-201ENST00000417997 CHCHD1Q96BP2 118 aaKnown RBP2.72□□□□□ -1.97
HMGB3P20-201ENST00000417997 MRAP2Q96G30 205 aa2.72□□□□□ -1.97
HMGB3P20-201ENST00000417997 C9orf85Q96MD7 179 aa2.72□□□□□ -1.97
HMGB3P20-201ENST00000417997 RCHY1Q96PM5 261 aa2.72□□□□□ -1.97
HMGB3P20-201ENST00000417997 WFDC10AQ9H1F0 79 aa2.72□□□□□ -1.97
HMGB3P20-201ENST00000417997 XCL2Q9UBD3 114 aa2.72□□□□□ -1.97
HMGB3P20-201ENST00000417997 LAMTOR2Q9Y2Q5 125 aa2.72□□□□□ -1.97
HMGB3P20-201ENST00000417997 HIVEP2P31629 2446 aa2.72□□□□□ -1.97
HMGB3P20-201ENST00000417997 UNC79Q9P2D8 2635 aa2.72□□□□□ -1.97
HMGB3P20-201ENST00000417997 CELSR1Q9NYQ6 3014 aa2.71□□□□□ -1.97
HMGB3P20-201ENST00000417997 HELZ2Q9BYK8 2649 aaKnown RBP2.71□□□□□ -1.98
HMGB3P20-201ENST00000417997 LOC389332A0A1B0GUA5 103 aa2.71□□□□□ -1.98
HMGB3P20-201ENST00000417997 SMKR1H3BMG3 65 aa2.71□□□□□ -1.98
HMGB3P20-201ENST00000417997 M0R2P5 195 aa2.71□□□□□ -1.98
HMGB3P20-201ENST00000417997 CRXO43186 299 aaPredicted RBP2.71□□□□□ -1.98
HMGB3P20-201ENST00000417997 NXPH4O95158 308 aa2.71□□□□□ -1.98
HMGB3P20-201ENST00000417997 PPP1R17O96001 155 aa2.71□□□□□ -1.98
HMGB3P20-201ENST00000417997 NPYP01303 97 aa2.71□□□□□ -1.98
HMGB3P20-201ENST00000417997 RBMY1A1P0DJD3 496 aaKnown RBP2.71□□□□□ -1.98
HMGB3P20-201ENST00000417997 RBMY1CP0DJD4 496 aa2.71□□□□□ -1.98
HMGB3P20-201ENST00000417997 ESDP10768 282 aa2.71□□□□□ -1.98
HMGB3P20-201ENST00000417997 IGLL1P15814 213 aa2.71□□□□□ -1.98
HMGB3P20-201ENST00000417997 RAB4AP20338 218 aa2.71□□□□□ -1.98
HMGB3P20-201ENST00000417997 EVI2AP22794 236 aa2.71□□□□□ -1.98
HMGB3P20-201ENST00000417997 RBMY1FQ15415 496 aaKnown RBP2.71□□□□□ -1.98
HMGB3P20-201ENST00000417997 DEFB125Q8N687 156 aa2.71□□□□□ -1.98
HMGB3P20-201ENST00000417997 C14orf178Q8N769 122 aaPredicted RBP2.71□□□□□ -1.98
HMGB3P20-201ENST00000417997 C16orf74Q96GX8 76 aa2.71□□□□□ -1.98
HMGB3P20-201ENST00000417997 C12orf57Q99622 126 aa2.71□□□□□ -1.98
HMGB3P20-201ENST00000417997 HIST1H2BLQ99880 126 aa2.71□□□□□ -1.98
HMGB3P20-201ENST00000417997 SPXQ9BT56 116 aa2.71□□□□□ -1.98
HMGB3P20-201ENST00000417997 PRR34Q9NV39 138 aa2.71□□□□□ -1.98
HMGB3P20-201ENST00000417997 TRAV26-2A0A0B4J265 109 aa2.7□□□□□ -1.98
HMGB3P20-201ENST00000417997 IGHV1-24A0A0C4DH33 117 aa2.7□□□□□ -1.98
HMGB3P20-201ENST00000417997 C20orf202A1L168 122 aa2.7□□□□□ -1.98
HMGB3P20-201ENST00000417997 A8MWV9 139 aa2.7□□□□□ -1.98
HMGB3P20-201ENST00000417997 H7C1H1 209 aa2.7□□□□□ -1.98
HMGB3P20-201ENST00000417997 HBDP02042 147 aa2.7□□□□□ -1.98
HMGB3P20-201ENST00000417997 LINC00614P0C842 121 aa2.7□□□□□ -1.98
HMGB3P20-201ENST00000417997 APOC4P55056 127 aa2.7□□□□□ -1.98
HMGB3P20-201ENST00000417997 XGP55808 180 aa2.7□□□□□ -1.98
HMGB3P20-201ENST00000417997 KRTDAPP60985 99 aa2.7□□□□□ -1.98
HMGB3P20-201ENST00000417997 RRN3P1Q2M238 152 aa2.7□□□□□ -1.98
HMGB3P20-201ENST00000417997 NIT1Q86X76 327 aa2.7□□□□□ -1.98
HMGB3P20-201ENST00000417997 FAM19A2Q8N3H0 131 aa2.7□□□□□ -1.98
HMGB3P20-201ENST00000417997 POM121L12Q8N7R1 296 aa2.7□□□□□ -1.98
HMGB3P20-201ENST00000417997 TMEM263Q8WUH6 116 aaKnown RBP2.7□□□□□ -1.98
HMGB3P20-201ENST00000417997 RNF185Q96GF1 192 aa2.7□□□□□ -1.98
HMGB3P20-201ENST00000417997 LINC00467Q9BRT7 94 aa2.7□□□□□ -1.98
HMGB3P20-201ENST00000417997 NXT2Q9NPJ8 142 aaKnown RBP2.7□□□□□ -1.98
HMGB3P20-201ENST00000417997 GSN-AS1Q9NRJ2 163 aa2.7□□□□□ -1.98
HMGB3P20-201ENST00000417997 MRPL16Q9NX20 251 aaKnown RBP2.7□□□□□ -1.98
HMGB3P20-201ENST00000417997 TEX15Q9BXT5 2789 aa2.7□□□□□ -1.98
HMGB3P20-201ENST00000417997 MYO9AB2RTY4 2548 aa2.7□□□□□ -1.98
HMGB3P20-201ENST00000417997 CCDC168Q8NDH2 2452 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms