RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 LINC01548A6NM66 108 aa9.16□□□□□ -0.94
UBR4-205ENST00000417040 HIGD2BQ4VC39 106 aa9.16□□□□□ -0.94
UBR4-205ENST00000417040 NUP210Q8TEM1 1887 aaPredicted RBP9.16□□□□□ -0.94
UBR4-205ENST00000417040 HIST2H2BDQ6DRA6 164 aa9.16□□□□□ -0.94
UBR4-205ENST00000417040 PLA2G2CQ5R387 149 aa9.15□□□□□ -0.94
UBR4-205ENST00000417040 ENHOQ6UWT2 76 aa9.15□□□□□ -0.94
UBR4-205ENST00000417040 C20orf197Q8N268 126 aa9.15□□□□□ -0.94
UBR4-205ENST00000417040 TANC1Q9C0D5 1861 aa9.15□□□□□ -0.94
UBR4-205ENST00000417040 C20orf203Q8NBC4 194 aa9.15□□□□□ -0.94
UBR4-205ENST00000417040 KIAA1549LQ6ZVL6 1849 aa9.15□□□□□ -0.94
UBR4-205ENST00000417040 TMEM256-PLSCR3K7ERE1 68 aa9.15□□□□□ -0.94
UBR4-205ENST00000417040 JMJD7-PLA2G4BH0Y9G9 81 aa9.15□□□□□ -0.95
UBR4-205ENST00000417040 C20orf173Q96LM9 149 aa9.15□□□□□ -0.95
UBR4-205ENST00000417040 PKIGQ9Y2B9 76 aa9.15□□□□□ -0.95
UBR4-205ENST00000417040 RNF152Q8N8N0 203 aa9.14□□□□□ -0.95
UBR4-205ENST00000417040 MBD6Q96DN6 1003 aa9.14□□□□□ -0.95
UBR4-205ENST00000417040 LINC00643Q86TS7 51 aa9.14□□□□□ -0.95
UBR4-205ENST00000417040 NEXN-AS1Q8NBZ9 246 aa9.14□□□□□ -0.95
UBR4-205ENST00000417040 RNF138Q8WVD3 245 aa9.14□□□□□ -0.95
UBR4-205ENST00000417040 DIRC1Q969H9 104 aa9.14□□□□□ -0.95
UBR4-205ENST00000417040 FANCD2OSQ96PS1 177 aa9.14□□□□□ -0.95
UBR4-205ENST00000417040 CADP27708 2225 aa9.14□□□□□ -0.95
UBR4-205ENST00000417040 A8MZ25 164 aa9.14□□□□□ -0.95
UBR4-205ENST00000417040 TMEM263Q8WUH6 116 aaKnown RBP9.14□□□□□ -0.95
UBR4-205ENST00000417040 CRIP3Q6Q6R5 217 aa9.14□□□□□ -0.95
UBR4-205ENST00000417040 KLK12Q9UKR0 248 aa9.14□□□□□ -0.95
UBR4-205ENST00000417040 CRIP1P50238 77 aa9.13□□□□□ -0.95
UBR4-205ENST00000417040 C10orf105Q8TEF2 133 aa9.13□□□□□ -0.95
UBR4-205ENST00000417040 TRBV6-1A0A0K0K1D8 114 aa9.13□□□□□ -0.95
UBR4-205ENST00000417040 F8W735 103 aaPredicted RBP9.13□□□□□ -0.95
UBR4-205ENST00000417040 H0Y9J4 135 aa9.13□□□□□ -0.95
UBR4-205ENST00000417040 CCDC179H3BU77 68 aa9.13□□□□□ -0.95
UBR4-205ENST00000417040 TRIAP1O43715 76 aa9.13□□□□□ -0.95
UBR4-205ENST00000417040 P0C879 139 aa9.13□□□□□ -0.95
UBR4-205ENST00000417040 PIK3CD-AS1Q5SR53 167 aa9.13□□□□□ -0.95
UBR4-205ENST00000417040 NACAE9PAV3 2078 aa9.13□□□□□ -0.95
UBR4-205ENST00000417040 SPAG11BQ08648 103 aa9.13□□□□□ -0.95
UBR4-205ENST00000417040 LINC00467Q9BRT7 94 aa9.13□□□□□ -0.95
UBR4-205ENST00000417040 NDUFA1O15239 70 aa9.12□□□□□ -0.95
UBR4-205ENST00000417040 C3orf22Q8N5N4 141 aa9.12□□□□□ -0.95
UBR4-205ENST00000417040 CCDC140Q96MF4 163 aa9.12□□□□□ -0.95
UBR4-205ENST00000417040 MRPS12O15235 138 aaKnown RBP9.12□□□□□ -0.95
UBR4-205ENST00000417040 PROK1P58294 105 aa9.12□□□□□ -0.95
UBR4-205ENST00000417040 IGLV1-47P01700 117 aa9.12□□□□□ -0.95
UBR4-205ENST00000417040 DEFB135Q30KP9 77 aa9.12□□□□□ -0.95
UBR4-205ENST00000417040 MED14OSP0DP75 135 aa9.11□□□□□ -0.95
UBR4-205ENST00000417040 TMEM223A0PJW6 202 aa9.11□□□□□ -0.95
UBR4-205ENST00000417040 UBE2AP49459 152 aa9.11□□□□□ -0.95
UBR4-205ENST00000417040 INSL3P51460 131 aa9.11□□□□□ -0.95
UBR4-205ENST00000417040 TRIOBPQ9H2D6 2365 aa9.11□□□□□ -0.95
UBR4-205ENST00000417040 USF3Q68DE3 2245 aa9.1□□□□□ -0.95
UBR4-205ENST00000417040 NDUFB1O75438 58 aa9.1□□□□□ -0.95
UBR4-205ENST00000417040 SNURFQ9Y675 71 aa9.1□□□□□ -0.95
UBR4-205ENST00000417040 RNF185Q96GF1 192 aa9.1□□□□□ -0.95
UBR4-205ENST00000417040 SPART-AS1P0CW21 52 aa9.1□□□□□ -0.95
UBR4-205ENST00000417040 C2orf91Q6ZV80 131 aa9.1□□□□□ -0.95
UBR4-205ENST00000417040 FAM236DA0A1B0GTK5 79 aa9.09□□□□□ -0.95
UBR4-205ENST00000417040 FAM236CP0DP71 79 aa9.09□□□□□ -0.95
UBR4-205ENST00000417040 TM2D2Q9BX73 214 aa9.09□□□□□ -0.95
UBR4-205ENST00000417040 COX7BP24311 80 aa9.09□□□□□ -0.95
UBR4-205ENST00000417040 DCANP1Q8TF63 244 aa9.09□□□□□ -0.95
UBR4-205ENST00000417040 PKDREJQ9NTG1 2253 aa9.09□□□□□ -0.95
UBR4-205ENST00000417040 ZDBF2Q9HCK1 2354 aa9.09□□□□□ -0.95
UBR4-205ENST00000417040 NUP210LQ5VU65 1888 aa9.09□□□□□ -0.95
UBR4-205ENST00000417040 A0A0J9YX75 114 aa9.09□□□□□ -0.95
UBR4-205ENST00000417040 UQCRQO14949 82 aa9.09□□□□□ -0.95
UBR4-205ENST00000417040 CDKN2A-AS1Q9UH64 79 aa9.09□□□□□ -0.95
UBR4-205ENST00000417040 ADORA2A-AS1P86434 159 aa9.09□□□□□ -0.96
UBR4-205ENST00000417040 A0A1W2PNU3 283 aaPredicted RBP9.08□□□□□ -0.96
UBR4-205ENST00000417040 LINC00269Q8N2A0 174 aa9.08□□□□□ -0.96
UBR4-205ENST00000417040 ZMAT4Q9H898 229 aa9.08□□□□□ -0.96
UBR4-205ENST00000417040 DSCAML1Q8TD84 2053 aa9.08□□□□□ -0.96
UBR4-205ENST00000417040 A0A0J9YWU9 116 aa9.08□□□□□ -0.96
UBR4-205ENST00000417040 Q6ZTI0 123 aa9.08□□□□□ -0.96
UBR4-205ENST00000417040 SMAD5-AS1Q9Y6J3 95 aa9.08□□□□□ -0.96
UBR4-205ENST00000417040 ZNF22P17026 224 aaPredicted RBP9.07□□□□□ -0.96
UBR4-205ENST00000417040 C9orf66Q5T8R8 295 aa9.07□□□□□ -0.96
UBR4-205ENST00000417040 A0A096LNI7 61 aa9.07□□□□□ -0.96
UBR4-205ENST00000417040 GAS8-AS1O95177 125 aa9.07□□□□□ -0.96
UBR4-205ENST00000417040 MAP6D1Q9H9H5 199 aa9.07□□□□□ -0.96
UBR4-205ENST00000417040 ZFAND2AQ8N6M9 145 aa9.07□□□□□ -0.96
UBR4-205ENST00000417040 ROS1P08922 2347 aa9.07□□□□□ -0.96
UBR4-205ENST00000417040 CLUHP3Q96NS8 147 aa9.07□□□□□ -0.96
UBR4-205ENST00000417040 ADAMTS9Q9P2N4 1935 aa9.06□□□□□ -0.96
UBR4-205ENST00000417040 IGLV4-3A0A075B6K6 122 aa9.06□□□□□ -0.96
UBR4-205ENST00000417040 SPTBN1Q01082 2364 aaKnown RBP9.06□□□□□ -0.96
UBR4-205ENST00000417040 IGKV4-1P06312 121 aa9.06□□□□□ -0.96
UBR4-205ENST00000417040 PIP4P1Q86T03 277 aa9.06□□□□□ -0.96
UBR4-205ENST00000417040 BPY2O14599 106 aa9.06□□□□□ -0.96
UBR4-205ENST00000417040 EIF4EBP1Q13541 118 aaPredicted RBP9.06□□□□□ -0.96
UBR4-205ENST00000417040 IGFL2Q6UWQ7 119 aa9.06□□□□□ -0.96
UBR4-205ENST00000417040 GPHB5Q86YW7 130 aa9.06□□□□□ -0.96
UBR4-205ENST00000417040 K7EMT4 169 aa9.06□□□□□ -0.96
UBR4-205ENST00000417040 ALPK3Q96L96 1907 aa9.05□□□□□ -0.96
UBR4-205ENST00000417040 C4orf3Q8WVX3 66 aa9.05□□□□□ -0.96
UBR4-205ENST00000417040 MED13Q9UHV7 2174 aa9.05□□□□□ -0.96
UBR4-205ENST00000417040 TMEM131Q92545 1883 aa9.05□□□□□ -0.96
UBR4-205ENST00000417040 DEFB113Q30KQ7 82 aa9.05□□□□□ -0.96
UBR4-205ENST00000417040 LINC00308Q8TCZ7 52 aa9.05□□□□□ -0.96
UBR4-205ENST00000417040 XGP55808 180 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms