RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 C19orf71A6NCJ1 209 aa13.13□□□□□ -0.31
PHRF1-202ENST00000413872 EIF4EBP1Q13541 118 aaPredicted RBP13.12□□□□□ -0.31
PHRF1-202ENST00000413872 CFC1BP0CG36 223 aa13.12□□□□□ -0.31
PHRF1-202ENST00000413872 CFC1P0CG37 223 aa13.12□□□□□ -0.31
PHRF1-202ENST00000413872 TIRAPP58753 221 aa13.12□□□□□ -0.31
PHRF1-202ENST00000413872 SPANXDQ9BXN6 97 aa13.12□□□□□ -0.31
PHRF1-202ENST00000413872 VSIG2Q96IQ7 327 aa13.12□□□□□ -0.31
PHRF1-202ENST00000413872 LYRM9A8MSI8 78 aa13.11□□□□□ -0.31
PHRF1-202ENST00000413872 Q6ZPA2 131 aa13.11□□□□□ -0.31
PHRF1-202ENST00000413872 TOMM6Q96B49 74 aa13.11□□□□□ -0.31
PHRF1-202ENST00000413872 GTSF1LQ9H1H1 148 aa13.11□□□□□ -0.31
PHRF1-202ENST00000413872 MDFICQ9P1T7 246 aa13.11□□□□□ -0.31
PHRF1-202ENST00000413872 HIST2H2BCQ6DN03 193 aa13.11□□□□□ -0.31
PHRF1-202ENST00000413872 C11orf45Q8TAV5 145 aa13.11□□□□□ -0.31
PHRF1-202ENST00000413872 DEFB1P60022 68 aa13.1□□□□□ -0.31
PHRF1-202ENST00000413872 PSMG3-AS1Q96PY0 264 aa13.1□□□□□ -0.31
PHRF1-202ENST00000413872 CARD19Q96LW7 228 aa13.1□□□□□ -0.31
PHRF1-202ENST00000413872 IGF2RP11717 2491 aa13.1□□□□□ -0.31
PHRF1-202ENST00000413872 C12orf74Q32Q52 190 aa13.1□□□□□ -0.31
PHRF1-202ENST00000413872 DEFB4AO15263 64 aa13.09□□□□□ -0.31
PHRF1-202ENST00000413872 K7EP34 96 aa13.09□□□□□ -0.31
PHRF1-202ENST00000413872 CCDC168Q8NDH2 2452 aa13.09□□□□□ -0.31
PHRF1-202ENST00000413872 H0YGX0 51 aa13.09□□□□□ -0.31
PHRF1-202ENST00000413872 A0A1W2PPM0 123 aa13.09□□□□□ -0.31
PHRF1-202ENST00000413872 LY6G6DO95868 133 aa13.08□□□□□ -0.31
PHRF1-202ENST00000413872 SND1-IT1Q9HBX3 110 aa13.08□□□□□ -0.31
PHRF1-202ENST00000413872 NACAE9PAV3 2078 aa13.08□□□□□ -0.32
PHRF1-202ENST00000413872 ORMDL1Q9P0S3 153 aa13.08□□□□□ -0.32
PHRF1-202ENST00000413872 MYO18BQ8IUG5 2567 aa13.08□□□□□ -0.32
PHRF1-202ENST00000413872 H3BQ85 93 aa13.07□□□□□ -0.32
PHRF1-202ENST00000413872 C20orf203Q8NBC4 194 aa13.07□□□□□ -0.32
PHRF1-202ENST00000413872 KLK12Q9UKR0 248 aa13.07□□□□□ -0.32
PHRF1-202ENST00000413872 IGLL5B9A064 214 aa13.07□□□□□ -0.32
PHRF1-202ENST00000413872 PLA2G2AP14555 144 aa13.07□□□□□ -0.32
PHRF1-202ENST00000413872 C1orf229Q6ZS94 237 aaPredicted RBP13.07□□□□□ -0.32
PHRF1-202ENST00000413872 SPATA25Q9BR10 227 aa13.07□□□□□ -0.32
PHRF1-202ENST00000413872 HAMPP81172 84 aa13.06□□□□□ -0.32
PHRF1-202ENST00000413872 RPL39P62891 51 aaKnown RBP13.06□□□□□ -0.32
PHRF1-202ENST00000413872 SPAG11BQ08648 103 aa13.06□□□□□ -0.32
PHRF1-202ENST00000413872 MAJINQ3KP22 176 aa13.06□□□□□ -0.32
PHRF1-202ENST00000413872 C14orf177Q52M58 125 aa13.06□□□□□ -0.32
PHRF1-202ENST00000413872 HILS1P60008 231 aa13.06□□□□□ -0.32
PHRF1-202ENST00000413872 PCP2Q8IVA1 136 aa13.06□□□□□ -0.32
PHRF1-202ENST00000413872 BAALCQ8WXS3 180 aa13.05□□□□□ -0.32
PHRF1-202ENST00000413872 Q8N6K4 173 aa13.05□□□□□ -0.32
PHRF1-202ENST00000413872 ZFAND3Q9H8U3 227 aa13.05□□□□□ -0.32
PHRF1-202ENST00000413872 SRCAPQ6ZRS2 3230 aa13.05□□□□□ -0.32
PHRF1-202ENST00000413872 C11orf86A6NJI1 115 aa13.04□□□□□ -0.32
PHRF1-202ENST00000413872 CITED1Q99966 193 aa13.04□□□□□ -0.32
PHRF1-202ENST00000413872 TNRC6AQ8NDV7 1962 aaKnown RBP13.04□□□□□ -0.32
PHRF1-202ENST00000413872 HIVEP3Q5T1R4 2406 aa13.04□□□□□ -0.32
PHRF1-202ENST00000413872 PSMB8P28062 276 aa13.03□□□□□ -0.32
PHRF1-202ENST00000413872 ETDBQ3ZM63 59 aa13.03□□□□□ -0.32
PHRF1-202ENST00000413872 MIFP14174 115 aa13.03□□□□□ -0.32
PHRF1-202ENST00000413872 ZNF702PQ9H963 129 aa13.03□□□□□ -0.32
PHRF1-202ENST00000413872 PRR14LQ5THK1 2151 aa13.03□□□□□ -0.32
PHRF1-202ENST00000413872 PCNX3Q9H6A9 2034 aa13.02□□□□□ -0.32
PHRF1-202ENST00000413872 FAM222AQ5U5X8 452 aa13.02□□□□□ -0.33
PHRF1-202ENST00000413872 CDPF1Q6NVV7 123 aa13.02□□□□□ -0.33
PHRF1-202ENST00000413872 OPRPNQ99935 248 aaPredicted RBP13.02□□□□□ -0.33
PHRF1-202ENST00000413872 E9PLD3 99 aa13.02□□□□□ -0.33
PHRF1-202ENST00000413872 K7ERJ3 54 aa13.02□□□□□ -0.33
PHRF1-202ENST00000413872 CCL25O15444 150 aa13.01□□□□□ -0.33
PHRF1-202ENST00000413872 FUSP35637 526 aaKnown RBP eCLIP13.01□□□□□ -0.33
PHRF1-202ENST00000413872 Q6ZTI0 123 aa13.01□□□□□ -0.33
PHRF1-202ENST00000413872 ZNF80P51504 273 aaPredicted RBP13.01□□□□□ -0.33
PHRF1-202ENST00000413872 LINC01006Q8NI28 216 aa13.01□□□□□ -0.33
PHRF1-202ENST00000413872 MBD6Q96DN6 1003 aa13.01□□□□□ -0.33
PHRF1-202ENST00000413872 NPSP0C0P6 89 aa13□□□□□ -0.33
PHRF1-202ENST00000413872 IGLC6P0CF74 106 aa13□□□□□ -0.33
PHRF1-202ENST00000413872 HIGD1BQ9P298 99 aa13□□□□□ -0.33
PHRF1-202ENST00000413872 KIR2DL5BA0A0G2JN68 375 aa13□□□□□ -0.33
PHRF1-202ENST00000413872 KIR2DL5BA0A0G2JPC4 375 aa13□□□□□ -0.33
PHRF1-202ENST00000413872 BAALC-AS2P0C853 105 aa13□□□□□ -0.33
PHRF1-202ENST00000413872 KIR2DL5AQ8N109 375 aa13□□□□□ -0.33
PHRF1-202ENST00000413872 H7C423 109 aa13□□□□□ -0.33
PHRF1-202ENST00000413872 MLST8Q9BVC4 326 aa13□□□□□ -0.33
PHRF1-202ENST00000413872 TRAV26-1A0A087WT03 109 aa12.99□□□□□ -0.33
PHRF1-202ENST00000413872 ZNF295-AS1Q8N0V1 137 aa12.99□□□□□ -0.33
PHRF1-202ENST00000413872 K7EP13 123 aa12.99□□□□□ -0.33
PHRF1-202ENST00000413872 ANKRD39Q53RE8 183 aa12.99□□□□□ -0.33
PHRF1-202ENST00000413872 MUSTN1Q8IVN3 82 aa12.99□□□□□ -0.33
PHRF1-202ENST00000413872 LINC00173Q6ZV60 143 aa12.99□□□□□ -0.33
PHRF1-202ENST00000413872 IGHV1-58A0A0C4DH39 117 aa12.99□□□□□ -0.33
PHRF1-202ENST00000413872 A0A1B0GXF2 115 aa12.99□□□□□ -0.33
PHRF1-202ENST00000413872 H3BMG7 143 aa12.98□□□□□ -0.33
PHRF1-202ENST00000413872 DEFB105AQ8NG35 78 aa12.98□□□□□ -0.33
PHRF1-202ENST00000413872 LRP4O75096 1905 aa12.98□□□□□ -0.33
PHRF1-202ENST00000413872 ARHGAP21Q5T5U3 1957 aa12.98□□□□□ -0.33
PHRF1-202ENST00000413872 A4D1N5 150 aa12.97□□□□□ -0.33
PHRF1-202ENST00000413872 NUPR1O60356 82 aa12.97□□□□□ -0.33
PHRF1-202ENST00000413872 DEFB131BA0A096LNP1 70 aa12.97□□□□□ -0.33
PHRF1-202ENST00000413872 UBE2AP49459 152 aa12.97□□□□□ -0.33
PHRF1-202ENST00000413872 IGLV2-8P01709 118 aa12.97□□□□□ -0.33
PHRF1-202ENST00000413872 PTPRSQ13332 1948 aa12.96□□□□□ -0.33
PHRF1-202ENST00000413872 TINCRA0A1B0GVN0 87 aa12.96□□□□□ -0.33
PHRF1-202ENST00000413872 COL5A1P20908 1838 aaPredicted RBP12.95□□□□□ -0.34
PHRF1-202ENST00000413872 NTN5Q8WTR8 489 aaPredicted RBP12.95□□□□□ -0.34
PHRF1-202ENST00000413872 C20orf173Q96LM9 149 aa12.95□□□□□ -0.34
PHRF1-202ENST00000413872 ODF1Q14990 250 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms