RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 GATD1Q8NB37 220 aa21.09■□□□□ 0.97
CSNK1E-206ENST00000413574 RNF185Q96GF1 192 aa21.09■□□□□ 0.97
CSNK1E-206ENST00000413574 TMEM242Q9NWH2 141 aa21.09■□□□□ 0.97
CSNK1E-206ENST00000413574 URGCP-MRPS24S4R325 110 aa21.08■□□□□ 0.97
CSNK1E-206ENST00000413574 A0A1B0GW15 77 aa21.07■□□□□ 0.96
CSNK1E-206ENST00000413574 RPL36AP83881 106 aaKnown RBP21.07■□□□□ 0.96
CSNK1E-206ENST00000413574 ATP6V0E2Q8NHE4 81 aa21.07■□□□□ 0.96
CSNK1E-206ENST00000413574 RPL36ALQ969Q0 106 aaKnown RBP21.07■□□□□ 0.96
CSNK1E-206ENST00000413574 RYR2Q92736 4967 aa21.07■□□□□ 0.96
CSNK1E-206ENST00000413574 TRBV7-3A0A075B6L6 115 aa21.07■□□□□ 0.96
CSNK1E-206ENST00000413574 RAB4AP20338 218 aa21.07■□□□□ 0.96
CSNK1E-206ENST00000413574 ATP5L2Q7Z4Y8 100 aa21.07■□□□□ 0.96
CSNK1E-206ENST00000413574 H7C1H1 209 aa21.06■□□□□ 0.96
CSNK1E-206ENST00000413574 KCNIP4Q6PIL6 250 aa21.06■□□□□ 0.96
CSNK1E-206ENST00000413574 RASL11AQ6T310 242 aa21.06■□□□□ 0.96
CSNK1E-206ENST00000413574 ATRAIDQ6UW56 229 aa21.06■□□□□ 0.96
CSNK1E-206ENST00000413574 BTF3L4Q96K17 158 aa21.06■□□□□ 0.96
CSNK1E-206ENST00000413574 GAS8-AS1O95177 125 aa21.05■□□□□ 0.96
CSNK1E-206ENST00000413574 SH2D6Q7Z4S9 175 aa21.05■□□□□ 0.96
CSNK1E-206ENST00000413574 UBE2D3P61077 147 aa21.04■□□□□ 0.96
CSNK1E-206ENST00000413574 UBE2D2P62837 147 aa21.04■□□□□ 0.96
CSNK1E-206ENST00000413574 FAM104BQ5XKR9 115 aa21.03■□□□□ 0.96
CSNK1E-206ENST00000413574 RPL39LQ96EH5 51 aaKnown RBP21.03■□□□□ 0.96
CSNK1E-206ENST00000413574 RYR3Q15413 4870 aa21.03■□□□□ 0.96
CSNK1E-206ENST00000413574 S100A8P05109 93 aa21.02■□□□□ 0.96
CSNK1E-206ENST00000413574 GTSF1LQ9H1H1 148 aa21.02■□□□□ 0.96
CSNK1E-206ENST00000413574 IGHV3-38A0A0C4DH36 116 aa21.01■□□□□ 0.95
CSNK1E-206ENST00000413574 S100PP25815 95 aa21.01■□□□□ 0.95
CSNK1E-206ENST00000413574 NIT2Q9NQR4 276 aa21.01■□□□□ 0.95
CSNK1E-206ENST00000413574 MRPS16Q9Y3D3 137 aaKnown RBP21.01■□□□□ 0.95
CSNK1E-206ENST00000413574 TNFRSF18Q9Y5U5 241 aa21.01■□□□□ 0.95
CSNK1E-206ENST00000413574 SMKR1H3BMG3 65 aa21■□□□□ 0.95
CSNK1E-206ENST00000413574 DNAH6Q9C0G6 4158 aa21■□□□□ 0.95
CSNK1E-206ENST00000413574 NCR2O95944 276 aa21■□□□□ 0.95
CSNK1E-206ENST00000413574 MRPL51Q4U2R6 128 aaKnown RBP21■□□□□ 0.95
CSNK1E-206ENST00000413574 DNAJC30Q96LL9 226 aa20.99■□□□□ 0.95
CSNK1E-206ENST00000413574 RPS10P46783 165 aaKnown RBP20.97■□□□□ 0.95
CSNK1E-206ENST00000413574 TRAV9-1A0A075B6T8 112 aa20.96■□□□□ 0.95
CSNK1E-206ENST00000413574 MRAP2Q96G30 205 aa20.96■□□□□ 0.95
CSNK1E-206ENST00000413574 IGLV2-18A0A075B6J9 118 aa20.96■□□□□ 0.95
CSNK1E-206ENST00000413574 TIRAPP58753 221 aa20.96■□□□□ 0.95
CSNK1E-206ENST00000413574 UPK3BQ9BT76 320 aa20.96■□□□□ 0.95
CSNK1E-206ENST00000413574 OR10J3Q5JRS4 329 aa20.94■□□□□ 0.94
CSNK1E-206ENST00000413574 WFDC10BQ8IUB3 73 aa20.94■□□□□ 0.94
CSNK1E-206ENST00000413574 DEFB104AQ8WTQ1 72 aa20.94■□□□□ 0.94
CSNK1E-206ENST00000413574 FRZBQ92765 325 aa20.94■□□□□ 0.94
CSNK1E-206ENST00000413574 Q9H8V8 135 aa20.93■□□□□ 0.94
CSNK1E-206ENST00000413574 LELP1Q5T871 98 aa20.93■□□□□ 0.94
CSNK1E-206ENST00000413574 DAZ4Q86SG3 579 aaKnown RBP20.92■□□□□ 0.94
CSNK1E-206ENST00000413574 DAZ3Q9NR90 486 aaKnown RBP20.92■□□□□ 0.94
CSNK1E-206ENST00000413574 TGIF2-C20orf24A0A0A6YYL0 155 aa20.91■□□□□ 0.94
CSNK1E-206ENST00000413574 CKS2P33552 79 aa20.91■□□□□ 0.94
CSNK1E-206ENST00000413574 ELOBQ15370 118 aa20.91■□□□□ 0.94
CSNK1E-206ENST00000413574 TMEM136Q6ZRR5 245 aa20.91■□□□□ 0.94
CSNK1E-206ENST00000413574 NRACQ8N912 160 aa20.91■□□□□ 0.94
CSNK1E-206ENST00000413574 D6R8Y8 96 aa20.9■□□□□ 0.94
CSNK1E-206ENST00000413574 M0R2N4 97 aa20.89■□□□□ 0.93
CSNK1E-206ENST00000413574 NTM-AS1Q6ZSK4 140 aa20.89■□□□□ 0.93
CSNK1E-206ENST00000413574 TRBV6-5A0A0K0K1A5 114 aa20.88■□□□□ 0.93
CSNK1E-206ENST00000413574 SDHAF1A6NFY7 115 aa20.88■□□□□ 0.93
CSNK1E-206ENST00000413574 SIVA1O15304 175 aa20.88■□□□□ 0.93
CSNK1E-206ENST00000413574 CBLN2Q8IUK8 224 aa20.88■□□□□ 0.93
CSNK1E-206ENST00000413574 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.88■□□□□ 0.93
CSNK1E-206ENST00000413574 ST20Q9HBF5 79 aa20.87■□□□□ 0.93
CSNK1E-206ENST00000413574 TRAV8-6A0A0B4J262 113 aa20.86■□□□□ 0.93
CSNK1E-206ENST00000413574 TRBV6-8A0A0A6YYG3 113 aa20.86■□□□□ 0.93
CSNK1E-206ENST00000413574 DNAH2Q9P225 4427 aa20.85■□□□□ 0.93
CSNK1E-206ENST00000413574 YPEL4Q96NS1 127 aa20.84■□□□□ 0.93
CSNK1E-206ENST00000413574 TMEM70Q9BUB7 260 aa20.84■□□□□ 0.93
CSNK1E-206ENST00000413574 TNFRSF6BO95407 300 aa20.82■□□□□ 0.92
CSNK1E-206ENST00000413574 NPYP01303 97 aa20.82■□□□□ 0.92
CSNK1E-206ENST00000413574 ORMDL3Q8N138 153 aa20.82■□□□□ 0.92
CSNK1E-206ENST00000413574 Q8N3U1 123 aa20.82■□□□□ 0.92
CSNK1E-206ENST00000413574 GNB1LQ9BYB4 327 aa20.82■□□□□ 0.92
CSNK1E-206ENST00000413574 TRBV24-1A0A075B6N3 115 aa20.82■□□□□ 0.92
CSNK1E-206ENST00000413574 PPBPP02775 128 aa20.82■□□□□ 0.92
CSNK1E-206ENST00000413574 POLR2KP53803 58 aaKnown RBP20.82■□□□□ 0.92
CSNK1E-206ENST00000413574 SMCO4Q9NRQ5 59 aa20.82■□□□□ 0.92
CSNK1E-206ENST00000413574 NBDYA0A0U1RRE5 68 aa20.81■□□□□ 0.92
CSNK1E-206ENST00000413574 PPP1R17O96001 155 aa20.81■□□□□ 0.92
CSNK1E-206ENST00000413574 SUMO2P61956 95 aaKnown RBP20.81■□□□□ 0.92
CSNK1E-206ENST00000413574 KIAA1644Q3SXP7 199 aa20.81■□□□□ 0.92
CSNK1E-206ENST00000413574 PRELID3AQ96N28 172 aa20.81■□□□□ 0.92
CSNK1E-206ENST00000413574 KRTAP1-5Q9BYS1 174 aa20.81■□□□□ 0.92
CSNK1E-206ENST00000413574 HLA-DQA1P01909 254 aa20.8■□□□□ 0.92
CSNK1E-206ENST00000413574 COTL1Q14019 142 aa20.8■□□□□ 0.92
CSNK1E-206ENST00000413574 APCSP02743 223 aa20.79■□□□□ 0.92
CSNK1E-206ENST00000413574 DNAH10OSP0CZ25 163 aa20.79■□□□□ 0.92
CSNK1E-206ENST00000413574 PMCHP20382 165 aa20.79■□□□□ 0.92
CSNK1E-206ENST00000413574 TMEM97Q5BJF2 176 aa20.79■□□□□ 0.92
CSNK1E-206ENST00000413574 I3L3M4 83 aa20.78■□□□□ 0.92
CSNK1E-206ENST00000413574 Q6ZR54 194 aa20.78■□□□□ 0.92
CSNK1E-206ENST00000413574 IGHV3-30P01768 117 aa20.78■□□□□ 0.92
CSNK1E-206ENST00000413574 IGHV3-33P01772 117 aa20.78■□□□□ 0.92
CSNK1E-206ENST00000413574 IGHV3-30-3P0DP02 117 aa20.78■□□□□ 0.92
CSNK1E-206ENST00000413574 IGHV3-30-5P0DP03 117 aa20.78■□□□□ 0.92
CSNK1E-206ENST00000413574 TRBV25-1A0A075B6N4 114 aa20.77■□□□□ 0.92
CSNK1E-206ENST00000413574 IGHV1-24A0A0C4DH33 117 aa20.77■□□□□ 0.92
CSNK1E-206ENST00000413574 CHCHD5Q9BSY4 110 aa20.77■□□□□ 0.92
CSNK1E-206ENST00000413574 TRBV27A0A0K0K1C4 114 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms