RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 S100A4P26447 101 aaKnown RBP4.03□□□□□ -1.76
EPHA4-202ENST00000409854 SPANXN1Q5VSR9 72 aa4.03□□□□□ -1.76
EPHA4-202ENST00000409854 POM121L12Q8N7R1 296 aa4.03□□□□□ -1.76
EPHA4-202ENST00000409854 ST20Q9HBF5 79 aa4.03□□□□□ -1.76
EPHA4-202ENST00000409854 TEP1Q99973 2627 aaKnown RBP4.03□□□□□ -1.76
EPHA4-202ENST00000409854 GIG44P09565 113 aaPredicted RBP4.02□□□□□ -1.77
EPHA4-202ENST00000409854 MORN3Q6PF18 240 aaPredicted RBP4.02□□□□□ -1.77
EPHA4-202ENST00000409854 BAGE3Q86Y29 109 aa4.02□□□□□ -1.77
EPHA4-202ENST00000409854 TMEM158Q8WZ71 300 aa4.02□□□□□ -1.77
EPHA4-202ENST00000409854 URB1-AS1Q96HZ7 61 aa4.02□□□□□ -1.77
EPHA4-202ENST00000409854 AP1S3Q96PC3 154 aa4.02□□□□□ -1.77
EPHA4-202ENST00000409854 ANAPC13Q9BS18 74 aa4.02□□□□□ -1.77
EPHA4-202ENST00000409854 WFDC10AQ9H1F0 79 aa4.02□□□□□ -1.77
EPHA4-202ENST00000409854 PHLDA3Q9Y5J5 127 aa4.02□□□□□ -1.77
EPHA4-202ENST00000409854 GAGE12JA6NER3 117 aa4.02□□□□□ -1.77
EPHA4-202ENST00000409854 GAGE7O76087 117 aa4.02□□□□□ -1.77
EPHA4-202ENST00000409854 GAGE12FP0CL80 117 aa4.02□□□□□ -1.77
EPHA4-202ENST00000409854 GAGE12GP0CL81 117 aa4.02□□□□□ -1.77
EPHA4-202ENST00000409854 GAGE12IP0CL82 117 aa4.02□□□□□ -1.77
EPHA4-202ENST00000409854 GAGE4Q13068 117 aa4.02□□□□□ -1.77
EPHA4-202ENST00000409854 MDFICQ9P1T7 246 aa4.02□□□□□ -1.77
EPHA4-202ENST00000409854 KIF25-AS1Q9Y6Z4 181 aa4.02□□□□□ -1.77
EPHA4-202ENST00000409854 NACAE9PAV3 2078 aa4.02□□□□□ -1.77
EPHA4-202ENST00000409854 A0A1B0GX51 115 aa4.02□□□□□ -1.77
EPHA4-202ENST00000409854 D6R8Y8 96 aa4.02□□□□□ -1.77
EPHA4-202ENST00000409854 PMCHP20382 165 aa4.02□□□□□ -1.77
EPHA4-202ENST00000409854 HINT1P49773 126 aaPredicted RBP4.02□□□□□ -1.77
EPHA4-202ENST00000409854 RPS28P62857 69 aaKnown RBP4.02□□□□□ -1.77
EPHA4-202ENST00000409854 PIK3CD-AS1Q5SR53 167 aa4.02□□□□□ -1.77
EPHA4-202ENST00000409854 RNASEKQ6P5S7 137 aaKnown RBP4.02□□□□□ -1.77
EPHA4-202ENST00000409854 ORMDL3Q8N138 153 aa4.02□□□□□ -1.77
EPHA4-202ENST00000409854 C1orf158Q8N1D5 194 aa4.02□□□□□ -1.77
EPHA4-202ENST00000409854 C11orf72Q8NBR9 251 aa4.02□□□□□ -1.77
EPHA4-202ENST00000409854 NIPBLQ6KC79 2804 aaeCLIP4.02□□□□□ -1.77
EPHA4-202ENST00000409854 H3BRM9 83 aa4.01□□□□□ -1.77
EPHA4-202ENST00000409854 M0R381 172 aa4.01□□□□□ -1.77
EPHA4-202ENST00000409854 CSNK1G2-AS1Q8NCQ2 148 aa4.01□□□□□ -1.77
EPHA4-202ENST00000409854 IL17DQ8TAD2 202 aa4.01□□□□□ -1.77
EPHA4-202ENST00000409854 DPH3P1Q9H4G8 78 aa4.01□□□□□ -1.77
EPHA4-202ENST00000409854 LINC00315P59091 139 aa4.01□□□□□ -1.77
EPHA4-202ENST00000409854 GTSCR1Q86UQ5 136 aa4.01□□□□□ -1.77
EPHA4-202ENST00000409854 CHCHD1Q96BP2 118 aaKnown RBP4.01□□□□□ -1.77
EPHA4-202ENST00000409854 PRELID3AQ96N28 172 aa4.01□□□□□ -1.77
EPHA4-202ENST00000409854 SPANXB1Q9NS25 103 aaPredicted RBP4.01□□□□□ -1.77
EPHA4-202ENST00000409854 XCL2Q9UBD3 114 aa4.01□□□□□ -1.77
EPHA4-202ENST00000409854 LINC01546A6NGU7 62 aa4.01□□□□□ -1.77
EPHA4-202ENST00000409854 C9orf118A6NHY6 69 aa4.01□□□□□ -1.77
EPHA4-202ENST00000409854 F8W1H4 67 aa4.01□□□□□ -1.77
EPHA4-202ENST00000409854 RS1O15537 224 aa4.01□□□□□ -1.77
EPHA4-202ENST00000409854 SPRY2O43597 315 aa4.01□□□□□ -1.77
EPHA4-202ENST00000409854 IGLL1P15814 213 aa4.01□□□□□ -1.77
EPHA4-202ENST00000409854 ZNF415Q09FC8 603 aa4.01□□□□□ -1.77
EPHA4-202ENST00000409854 FBN1P35555 2871 aaKnown RBP4.01□□□□□ -1.77
EPHA4-202ENST00000409854 NPYP01303 97 aa4□□□□□ -1.77
EPHA4-202ENST00000409854 CKS2P33552 79 aa4□□□□□ -1.77
EPHA4-202ENST00000409854 SEC61GP60059 68 aa4□□□□□ -1.77
EPHA4-202ENST00000409854 KRTDAPP60985 99 aa4□□□□□ -1.77
EPHA4-202ENST00000409854 ERASQ7Z444 233 aa4□□□□□ -1.77
EPHA4-202ENST00000409854 C3orf56Q8N813 242 aa4□□□□□ -1.77
EPHA4-202ENST00000409854 NRACQ8N912 160 aa4□□□□□ -1.77
EPHA4-202ENST00000409854 SYT8Q8NBV8 401 aa4□□□□□ -1.77
EPHA4-202ENST00000409854 ATP6V0E2Q8NHE4 81 aa4□□□□□ -1.77
EPHA4-202ENST00000409854 RNF183Q96D59 192 aa4□□□□□ -1.77
EPHA4-202ENST00000409854 VWFP04275 2813 aa4□□□□□ -1.77
EPHA4-202ENST00000409854 GAS8-AS1O95177 125 aa4□□□□□ -1.77
EPHA4-202ENST00000409854 PMVKQ15126 192 aa4□□□□□ -1.77
EPHA4-202ENST00000409854 BVES-AS1Q5T3Y7 98 aa4□□□□□ -1.77
EPHA4-202ENST00000409854 Q6Q795 121 aa4□□□□□ -1.77
EPHA4-202ENST00000409854 Q6ZWC4 215 aa4□□□□□ -1.77
EPHA4-202ENST00000409854 LINC01587Q99440 93 aa4□□□□□ -1.77
EPHA4-202ENST00000409854 TRAV9-2A0A087WT02 112 aa4□□□□□ -1.77
EPHA4-202ENST00000409854 SMKR1H3BMG3 65 aa4□□□□□ -1.77
EPHA4-202ENST00000409854 NCR2O95944 276 aa4□□□□□ -1.77
EPHA4-202ENST00000409854 ATOH7Q8N100 152 aa4□□□□□ -1.77
EPHA4-202ENST00000409854 C14orf178Q8N769 122 aaPredicted RBP4□□□□□ -1.77
EPHA4-202ENST00000409854 B5MCH6 92 aa3.99□□□□□ -1.77
EPHA4-202ENST00000409854 M0R2P5 195 aa3.99□□□□□ -1.77
EPHA4-202ENST00000409854 TNFRSF6BO95407 300 aa3.99□□□□□ -1.77
EPHA4-202ENST00000409854 RPL35AP18077 110 aaKnown RBP3.99□□□□□ -1.77
EPHA4-202ENST00000409854 EGFEM1PQ0D2K5 195 aa3.99□□□□□ -1.77
EPHA4-202ENST00000409854 ZNRF2Q8NHG8 242 aa3.99□□□□□ -1.77
EPHA4-202ENST00000409854 KIR2DL5BQ8NHK3 375 aa3.99□□□□□ -1.77
EPHA4-202ENST00000409854 EDA2RQ9HAV5 297 aa3.99□□□□□ -1.77
EPHA4-202ENST00000409854 IGLV2-18A0A075B6J9 118 aa3.99□□□□□ -1.77
EPHA4-202ENST00000409854 PRM2P04554 102 aa3.99□□□□□ -1.77
EPHA4-202ENST00000409854 CRYGDP07320 174 aa3.99□□□□□ -1.77
EPHA4-202ENST00000409854 TMEM263Q8WUH6 116 aaKnown RBP3.99□□□□□ -1.77
EPHA4-202ENST00000409854 JPT2Q9H910 190 aa3.99□□□□□ -1.77
EPHA4-202ENST00000409854 ATRQ13535 2644 aa3.98□□□□□ -1.77
EPHA4-202ENST00000409854 CMYA5Q8N3K9 4069 aa3.98□□□□□ -1.77
EPHA4-202ENST00000409854 F5H768 121 aa3.98□□□□□ -1.77
EPHA4-202ENST00000409854 GATA1P15976 413 aaPredicted RBP3.98□□□□□ -1.77
EPHA4-202ENST00000409854 ZNF876PQ49A33 203 aa3.98□□□□□ -1.77
EPHA4-202ENST00000409854 FAM19A2Q8N3H0 131 aa3.98□□□□□ -1.77
EPHA4-202ENST00000409854 RASL10AQ92737 203 aa3.98□□□□□ -1.77
EPHA4-202ENST00000409854 MAP1LC3AQ9H492 121 aa3.98□□□□□ -1.77
EPHA4-202ENST00000409854 TRAV26-2A0A0B4J265 109 aa3.98□□□□□ -1.77
EPHA4-202ENST00000409854 IGHV1-24A0A0C4DH33 117 aa3.98□□□□□ -1.77
EPHA4-202ENST00000409854 PLAC8L1A1L4L8 177 aa3.98□□□□□ -1.77
EPHA4-202ENST00000409854 J3KT08 172 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 161.2 ms