RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 RS1O15537 224 aa11.15□□□□□ -0.62
SHANK2-204ENST00000409530 SERF1AO75920 110 aa11.15□□□□□ -0.62
SHANK2-204ENST00000409530 HTN3P15516 51 aa11.15□□□□□ -0.62
SHANK2-204ENST00000409530 LGALS9BQ3B8N2 356 aa11.15□□□□□ -0.62
SHANK2-204ENST00000409530 OR10J3Q5JRS4 329 aa11.15□□□□□ -0.62
SHANK2-204ENST00000409530 Q9UF83 564 aa11.15□□□□□ -0.62
SHANK2-204ENST00000409530 MRAP2Q96G30 205 aa11.14□□□□□ -0.63
SHANK2-204ENST00000409530 DKK2Q9UBU2 259 aa11.14□□□□□ -0.63
SHANK2-204ENST00000409530 A0A0J9YWU9 116 aa11.14□□□□□ -0.63
SHANK2-204ENST00000409530 NUPR1O60356 82 aa11.14□□□□□ -0.63
SHANK2-204ENST00000409530 PMCHL1Q16048 86 aa11.14□□□□□ -0.63
SHANK2-204ENST00000409530 NRACQ8N912 160 aa11.14□□□□□ -0.63
SHANK2-204ENST00000409530 U3KQK5 164 aa11.14□□□□□ -0.63
SHANK2-204ENST00000409530 TRAV4A0A0B4J268 109 aa11.13□□□□□ -0.63
SHANK2-204ENST00000409530 IFI27P40305 119 aaPredicted RBP11.13□□□□□ -0.63
SHANK2-204ENST00000409530 DAD1P61803 113 aa11.13□□□□□ -0.63
SHANK2-204ENST00000409530 SPATA25Q9BR10 227 aa11.13□□□□□ -0.63
SHANK2-204ENST00000409530 TP53TG1Q9Y2A0 90 aa11.13□□□□□ -0.63
SHANK2-204ENST00000409530 COL7A1Q02388 2944 aa11.13□□□□□ -0.63
SHANK2-204ENST00000409530 TRGV4A0A0C4DH28 118 aa11.12□□□□□ -0.63
SHANK2-204ENST00000409530 PPBPP02775 128 aa11.12□□□□□ -0.63
SHANK2-204ENST00000409530 PMCHP20382 165 aa11.12□□□□□ -0.63
SHANK2-204ENST00000409530 LINC00310P59036 64 aa11.12□□□□□ -0.63
SHANK2-204ENST00000409530 UFSP1Q6NVU6 142 aa11.12□□□□□ -0.63
SHANK2-204ENST00000409530 PRSS3P2Q8NHM4 247 aa11.12□□□□□ -0.63
SHANK2-204ENST00000409530 MAP1LC3AQ9H492 121 aa11.12□□□□□ -0.63
SHANK2-204ENST00000409530 RHODO00212 210 aa11.12□□□□□ -0.63
SHANK2-204ENST00000409530 PTH2Q96A98 100 aa11.12□□□□□ -0.63
SHANK2-204ENST00000409530 C2orf88Q9BSF0 95 aa11.12□□□□□ -0.63
SHANK2-204ENST00000409530 NDUFAF3Q9BU61 184 aa11.12□□□□□ -0.63
SHANK2-204ENST00000409530 A0A1B0GV90 55 aa11.11□□□□□ -0.63
SHANK2-204ENST00000409530 M0QY20 66 aa11.11□□□□□ -0.63
SHANK2-204ENST00000409530 LYRM9A8MSI8 78 aa11.11□□□□□ -0.63
SHANK2-204ENST00000409530 PIK3CD-AS1Q5SR53 167 aa11.11□□□□□ -0.63
SHANK2-204ENST00000409530 NIT1Q86X76 327 aa11.11□□□□□ -0.63
SHANK2-204ENST00000409530 FAM19A2Q8N3H0 131 aa11.11□□□□□ -0.63
SHANK2-204ENST00000409530 HUWE1Q7Z6Z7 4374 aaKnown RBP11.1□□□□□ -0.63
SHANK2-204ENST00000409530 SPART-AS1P0CW21 52 aa11.1□□□□□ -0.63
SHANK2-204ENST00000409530 Q0VG73 95 aa11.1□□□□□ -0.63
SHANK2-204ENST00000409530 FA2HQ7L5A8 372 aa11.1□□□□□ -0.63
SHANK2-204ENST00000409530 URB1-AS1Q96HZ7 61 aa11.1□□□□□ -0.63
SHANK2-204ENST00000409530 TM2D3Q9BRN9 247 aa11.1□□□□□ -0.63
SHANK2-204ENST00000409530 LOC100131303A0A0U1RQF7 123 aa11.09□□□□□ -0.63
SHANK2-204ENST00000409530 SLC25A29Q8N8R3 303 aa11.09□□□□□ -0.63
SHANK2-204ENST00000409530 TCAPO15273 167 aa11.09□□□□□ -0.63
SHANK2-204ENST00000409530 SUMO2P61956 95 aaKnown RBP11.09□□□□□ -0.63
SHANK2-204ENST00000409530 ZMAT4Q9H898 229 aa11.09□□□□□ -0.63
SHANK2-204ENST00000409530 ST20Q9HBF5 79 aa11.09□□□□□ -0.63
SHANK2-204ENST00000409530 IGHV3-38A0A0C4DH36 116 aa11.08□□□□□ -0.64
SHANK2-204ENST00000409530 K7EQD1 137 aa11.08□□□□□ -0.64
SHANK2-204ENST00000409530 HSBP1O75506 76 aa11.08□□□□□ -0.64
SHANK2-204ENST00000409530 PHLDA1Q8WV24 401 aaPredicted RBP11.08□□□□□ -0.64
SHANK2-204ENST00000409530 SDHAF1A6NFY7 115 aa11.08□□□□□ -0.64
SHANK2-204ENST00000409530 H7C1H1 209 aa11.08□□□□□ -0.64
SHANK2-204ENST00000409530 ZFP2Q6ZN57 461 aa11.08□□□□□ -0.64
SHANK2-204ENST00000409530 A0A0J9YY99 117 aa11.07□□□□□ -0.64
SHANK2-204ENST00000409530 GAGE12JA6NER3 117 aa11.07□□□□□ -0.64
SHANK2-204ENST00000409530 GAGE1Q13065 139 aa11.07□□□□□ -0.64
SHANK2-204ENST00000409530 GAGE4Q13068 117 aa11.07□□□□□ -0.64
SHANK2-204ENST00000409530 GAGE5Q13069 117 aa11.07□□□□□ -0.64
SHANK2-204ENST00000409530 GAGE13Q4V321 117 aa11.07□□□□□ -0.64
SHANK2-204ENST00000409530 NEXN-AS1Q8NBZ9 246 aa11.07□□□□□ -0.64
SHANK2-204ENST00000409530 SMIM2Q9BVW6 85 aa11.07□□□□□ -0.64
SHANK2-204ENST00000409530 PRKDCP78527 4128 aaKnown RBP11.07□□□□□ -0.64
SHANK2-204ENST00000409530 F5H768 121 aa11.06□□□□□ -0.64
SHANK2-204ENST00000409530 LINC00614P0C842 121 aa11.06□□□□□ -0.64
SHANK2-204ENST00000409530 NANOS2P60321 138 aaKnown RBP11.06□□□□□ -0.64
SHANK2-204ENST00000409530 FHL2Q14192 279 aa11.06□□□□□ -0.64
SHANK2-204ENST00000409530 LINC00612Q8N6U2 182 aa11.06□□□□□ -0.64
SHANK2-204ENST00000409530 LAMTOR2Q9Y2Q5 125 aa11.06□□□□□ -0.64
SHANK2-204ENST00000409530 TNFRSF18Q9Y5U5 241 aa11.06□□□□□ -0.64
SHANK2-204ENST00000409530 AMTP48728 403 aa11.06□□□□□ -0.64
SHANK2-204ENST00000409530 ZNRF2Q8NHG8 242 aa11.06□□□□□ -0.64
SHANK2-204ENST00000409530 AP5S1Q9NUS5 200 aa11.06□□□□□ -0.64
SHANK2-204ENST00000409530 SCGB1D1O95968 90 aa11.05□□□□□ -0.64
SHANK2-204ENST00000409530 Q6ZTC4 211 aa11.05□□□□□ -0.64
SHANK2-204ENST00000409530 TMEM70Q9BUB7 260 aa11.05□□□□□ -0.64
SHANK2-204ENST00000409530 DNAH9Q9NYC9 4486 aa11.05□□□□□ -0.64
SHANK2-204ENST00000409530 A0A096LPF7 62 aa11.05□□□□□ -0.64
SHANK2-204ENST00000409530 ATP5G1P05496 136 aa11.05□□□□□ -0.64
SHANK2-204ENST00000409530 ESDP10768 282 aa11.05□□□□□ -0.64
SHANK2-204ENST00000409530 C12orf74Q32Q52 190 aa11.05□□□□□ -0.64
SHANK2-204ENST00000409530 C11orf68Q9H3H3 251 aaKnown RBP11.05□□□□□ -0.64
SHANK2-204ENST00000409530 IGHV1-24A0A0C4DH33 117 aa11.04□□□□□ -0.64
SHANK2-204ENST00000409530 B9D2Q9BPU9 175 aa11.04□□□□□ -0.64
SHANK2-204ENST00000409530 HHLA3Q9XRX5 114 aa11.04□□□□□ -0.64
SHANK2-204ENST00000409530 TMEM238LA0A1B0GVL6 79 aa11.03□□□□□ -0.64
SHANK2-204ENST00000409530 C11orf45Q8TAV5 145 aa11.03□□□□□ -0.64
SHANK2-204ENST00000409530 PPP1R17O96001 155 aa11.03□□□□□ -0.64
SHANK2-204ENST00000409530 Q8N8P6 123 aa11.03□□□□□ -0.64
SHANK2-204ENST00000409530 C20orf78Q9BR46 151 aa11.03□□□□□ -0.64
SHANK2-204ENST00000409530 NXT2Q9NPJ8 142 aaKnown RBP11.03□□□□□ -0.64
SHANK2-204ENST00000409530 TRAV26-1A0A087WT03 109 aa11.02□□□□□ -0.64
SHANK2-204ENST00000409530 IGLV2-18A0A075B6J9 118 aa11.02□□□□□ -0.65
SHANK2-204ENST00000409530 FCER1GP30273 86 aa11.02□□□□□ -0.65
SHANK2-204ENST00000409530 RHOHQ15669 191 aa11.02□□□□□ -0.65
SHANK2-204ENST00000409530 GYPEP15421 78 aa11.01□□□□□ -0.65
SHANK2-204ENST00000409530 RPL36AP83881 106 aaKnown RBP11.01□□□□□ -0.65
SHANK2-204ENST00000409530 RPL36ALQ969Q0 106 aaKnown RBP11.01□□□□□ -0.65
SHANK2-204ENST00000409530 CHCHD1Q96BP2 118 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms