RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 GAGE7O76087 117 aa11.59□□□□□ -0.55
LIMS2-205ENST00000409455 GAGE12FP0CL80 117 aa11.59□□□□□ -0.55
LIMS2-205ENST00000409455 GAGE12GP0CL81 117 aa11.59□□□□□ -0.55
LIMS2-205ENST00000409455 GAGE12IP0CL82 117 aa11.59□□□□□ -0.55
LIMS2-205ENST00000409455 RNASE3P12724 160 aaKnown RBP11.59□□□□□ -0.55
LIMS2-205ENST00000409455 IFITM1P13164 125 aa11.59□□□□□ -0.55
LIMS2-205ENST00000409455 SAA4P35542 130 aa11.59□□□□□ -0.55
LIMS2-205ENST00000409455 GAGE4Q13068 117 aa11.59□□□□□ -0.55
LIMS2-205ENST00000409455 NTN5Q8WTR8 489 aaPredicted RBP11.59□□□□□ -0.55
LIMS2-205ENST00000409455 GNRH2O43555 120 aa11.58□□□□□ -0.56
LIMS2-205ENST00000409455 DEFB104AQ8WTQ1 72 aa11.58□□□□□ -0.56
LIMS2-205ENST00000409455 TMEM263Q8WUH6 116 aaKnown RBP11.58□□□□□ -0.56
LIMS2-205ENST00000409455 TRAV2A0A0B4J234 112 aa11.58□□□□□ -0.56
LIMS2-205ENST00000409455 Q8N1Y9 231 aa11.58□□□□□ -0.56
LIMS2-205ENST00000409455 POLR2KP53803 58 aaKnown RBP11.57□□□□□ -0.56
LIMS2-205ENST00000409455 ZFHX3Q15911 3703 aa11.57□□□□□ -0.56
LIMS2-205ENST00000409455 IGHV3OR16-10A0A075B7F0 116 aa11.56□□□□□ -0.56
LIMS2-205ENST00000409455 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.56□□□□□ -0.56
LIMS2-205ENST00000409455 CRLF1O75462 422 aa11.56□□□□□ -0.56
LIMS2-205ENST00000409455 NXPH4O95158 308 aa11.56□□□□□ -0.56
LIMS2-205ENST00000409455 LINC01620Q4KN68 170 aa11.56□□□□□ -0.56
LIMS2-205ENST00000409455 Q6Q795 121 aa11.56□□□□□ -0.56
LIMS2-205ENST00000409455 ABCA12Q86UK0 2595 aa11.56□□□□□ -0.56
LIMS2-205ENST00000409455 TRAV8-4A0A0B4J246 113 aa11.56□□□□□ -0.56
LIMS2-205ENST00000409455 NPFFO15130 113 aa11.56□□□□□ -0.56
LIMS2-205ENST00000409455 SUMO4Q6EEV6 95 aa11.56□□□□□ -0.56
LIMS2-205ENST00000409455 KIF25-AS1Q9Y6Z4 181 aa11.56□□□□□ -0.56
LIMS2-205ENST00000409455 SDHAF1A6NFY7 115 aa11.55□□□□□ -0.56
LIMS2-205ENST00000409455 F5H697 171 aa11.55□□□□□ -0.56
LIMS2-205ENST00000409455 LEPROTO15243 131 aa11.55□□□□□ -0.56
LIMS2-205ENST00000409455 DSCR9P59020 149 aa11.55□□□□□ -0.56
LIMS2-205ENST00000409455 LINC00315P59091 139 aa11.55□□□□□ -0.56
LIMS2-205ENST00000409455 EIF4EBP3O60516 100 aaPredicted RBP11.55□□□□□ -0.56
LIMS2-205ENST00000409455 RPL13AP40429 203 aaKnown RBP11.55□□□□□ -0.56
LIMS2-205ENST00000409455 MUSTN1Q8IVN3 82 aa11.55□□□□□ -0.56
LIMS2-205ENST00000409455 ANKRD17O75179 2603 aaKnown RBP11.55□□□□□ -0.56
LIMS2-205ENST00000409455 TEX49A0A1B0GTD5 131 aa11.54□□□□□ -0.56
LIMS2-205ENST00000409455 MSMBP08118 114 aa11.54□□□□□ -0.56
LIMS2-205ENST00000409455 DEFB1P60022 68 aa11.54□□□□□ -0.56
LIMS2-205ENST00000409455 CCDC179H3BU77 68 aa11.54□□□□□ -0.56
LIMS2-205ENST00000409455 FAM19A4Q96LR4 140 aa11.54□□□□□ -0.56
LIMS2-205ENST00000409455 TENM4Q6N022 2769 aa11.54□□□□□ -0.56
LIMS2-205ENST00000409455 TMEM223A0PJW6 202 aa11.53□□□□□ -0.56
LIMS2-205ENST00000409455 BRD3OSQ6XYD6 125 aa11.53□□□□□ -0.56
LIMS2-205ENST00000409455 A0A087WWL8 130 aa11.53□□□□□ -0.56
LIMS2-205ENST00000409455 TRBV27A0A0K0K1C4 114 aa11.53□□□□□ -0.56
LIMS2-205ENST00000409455 TRBV10-2A0A0K0K1G8 114 aa11.53□□□□□ -0.56
LIMS2-205ENST00000409455 H3BMM0 161 aa11.53□□□□□ -0.56
LIMS2-205ENST00000409455 ELANEP08246 267 aa11.53□□□□□ -0.56
LIMS2-205ENST00000409455 PLA2G2AP14555 144 aa11.53□□□□□ -0.56
LIMS2-205ENST00000409455 RPL11P62913 178 aaKnown RBP11.53□□□□□ -0.56
LIMS2-205ENST00000409455 APRG1Q8IVJ8 170 aa11.53□□□□□ -0.56
LIMS2-205ENST00000409455 UBE2WQ96B02 151 aa11.53□□□□□ -0.56
LIMS2-205ENST00000409455 DOPEY2Q9Y3R5 2298 aa11.52□□□□□ -0.56
LIMS2-205ENST00000409455 SOCS3O14543 225 aa11.52□□□□□ -0.56
LIMS2-205ENST00000409455 IGHV1-69P01742 117 aa11.52□□□□□ -0.56
LIMS2-205ENST00000409455 NAV2Q8IVL1 2488 aa11.52□□□□□ -0.57
LIMS2-205ENST00000409455 NBPF19A0A087WUL8 3843 aa11.52□□□□□ -0.57
LIMS2-205ENST00000409455 TRBV7-9A0A0J9YWB2 115 aa11.52□□□□□ -0.57
LIMS2-205ENST00000409455 B4DSR2 109 aa11.52□□□□□ -0.57
LIMS2-205ENST00000409455 F6UB75 175 aa11.52□□□□□ -0.57
LIMS2-205ENST00000409455 C15orf53Q8NAA6 179 aa11.52□□□□□ -0.57
LIMS2-205ENST00000409455 LINC01600Q96MT4 127 aa11.52□□□□□ -0.57
LIMS2-205ENST00000409455 ODF3Q96PU9 254 aa11.52□□□□□ -0.57
LIMS2-205ENST00000409455 JPT2Q9H910 190 aa11.52□□□□□ -0.57
LIMS2-205ENST00000409455 BEX4Q9NWD9 120 aaPredicted RBP11.52□□□□□ -0.57
LIMS2-205ENST00000409455 MUC4Q99102 2169 aa11.51□□□□□ -0.57
LIMS2-205ENST00000409455 IGHV3-64A0A075B6Q5 118 aa11.51□□□□□ -0.57
LIMS2-205ENST00000409455 IGHV4-38-2P0DP08 117 aa11.51□□□□□ -0.57
LIMS2-205ENST00000409455 FAM159AQ6UWV7 190 aa11.51□□□□□ -0.57
LIMS2-205ENST00000409455 ZNF256Q9Y2P7 627 aaPredicted RBP11.51□□□□□ -0.57
LIMS2-205ENST00000409455 TRBV30A0A0K0K1B3 111 aa11.51□□□□□ -0.57
LIMS2-205ENST00000409455 FAM223BA6NKX1 122 aa11.51□□□□□ -0.57
LIMS2-205ENST00000409455 M0R2P5 195 aa11.51□□□□□ -0.57
LIMS2-205ENST00000409455 FAM223AQ8IWN6 122 aa11.51□□□□□ -0.57
LIMS2-205ENST00000409455 MAPK1IP1LQ8NDC0 245 aa11.51□□□□□ -0.57
LIMS2-205ENST00000409455 SPANXA1Q9NS26 97 aa11.51□□□□□ -0.57
LIMS2-205ENST00000409455 J3QKU1 62 aa11.5□□□□□ -0.57
LIMS2-205ENST00000409455 UNQ9165/PRO28630Q6UXU0 137 aa11.5□□□□□ -0.57
LIMS2-205ENST00000409455 A0A096LNT2 108 aa11.5□□□□□ -0.57
LIMS2-205ENST00000409455 A0A0J9YX75 114 aa11.5□□□□□ -0.57
LIMS2-205ENST00000409455 TRBV6-5A0A0K0K1A5 114 aa11.5□□□□□ -0.57
LIMS2-205ENST00000409455 TRIAP1O43715 76 aa11.5□□□□□ -0.57
LIMS2-205ENST00000409455 AVPP01185 164 aa11.5□□□□□ -0.57
LIMS2-205ENST00000409455 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.49□□□□□ -0.57
LIMS2-205ENST00000409455 FAM74A4Q5TZK3 123 aa11.49□□□□□ -0.57
LIMS2-205ENST00000409455 HIST2H2BCQ6DN03 193 aa11.49□□□□□ -0.57
LIMS2-205ENST00000409455 C2orf82Q6UX34 121 aa11.49□□□□□ -0.57
LIMS2-205ENST00000409455 LGALS9O00182 355 aa11.49□□□□□ -0.57
LIMS2-205ENST00000409455 ZNF22P17026 224 aaPredicted RBP11.49□□□□□ -0.57
LIMS2-205ENST00000409455 RHOHQ15669 191 aa11.49□□□□□ -0.57
LIMS2-205ENST00000409455 DEFB113Q30KQ7 82 aa11.49□□□□□ -0.57
LIMS2-205ENST00000409455 NSUN5P1Q3KNT7 163 aa11.49□□□□□ -0.57
LIMS2-205ENST00000409455 OPRPNQ99935 248 aaPredicted RBP11.49□□□□□ -0.57
LIMS2-205ENST00000409455 NDUFA4O00483 81 aa11.48□□□□□ -0.57
LIMS2-205ENST00000409455 FAM110AQ9BQ89 295 aa11.48□□□□□ -0.57
LIMS2-205ENST00000409455 APCP25054 2843 aa11.48□□□□□ -0.57
LIMS2-205ENST00000409455 TRAV41A0A0B4J266 112 aa11.48□□□□□ -0.57
LIMS2-205ENST00000409455 HELZ2Q9BYK8 2649 aaKnown RBP11.48□□□□□ -0.57
LIMS2-205ENST00000409455 IGKV3-7A0A075B6H7 116 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms