RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 YAE1D1Q9NRH1 226 aa10.09□□□□□ -0.79
COL6A2-204ENST00000409416 TRBV20-1A0A075B6N2 111 aa10.08□□□□□ -0.8
COL6A2-204ENST00000409416 PRSS29PA6NIE9 313 aa10.08□□□□□ -0.8
COL6A2-204ENST00000409416 RPL35AP18077 110 aaKnown RBP10.08□□□□□ -0.8
COL6A2-204ENST00000409416 Q1RN00 199 aa10.08□□□□□ -0.8
COL6A2-204ENST00000409416 ZNF625Q96I27 306 aaPredicted RBP10.08□□□□□ -0.8
COL6A2-204ENST00000409416 H7C1H1 209 aa10.08□□□□□ -0.8
COL6A2-204ENST00000409416 DUSP14O95147 198 aaKnown RBP10.08□□□□□ -0.8
COL6A2-204ENST00000409416 UFSP1Q6NVU6 142 aa10.08□□□□□ -0.8
COL6A2-204ENST00000409416 DPH3P1Q9H4G8 78 aa10.08□□□□□ -0.8
COL6A2-204ENST00000409416 HOXD3P31249 432 aaPredicted RBP10.08□□□□□ -0.8
COL6A2-204ENST00000409416 SMPXQ9UHP9 88 aa10.08□□□□□ -0.8
COL6A2-204ENST00000409416 UNC79Q9P2D8 2635 aa10.07□□□□□ -0.8
COL6A2-204ENST00000409416 ZNF815PA8K554 130 aa10.07□□□□□ -0.8
COL6A2-204ENST00000409416 TP53TG1Q9Y2A0 90 aa10.07□□□□□ -0.8
COL6A2-204ENST00000409416 IGLV2-18A0A075B6J9 118 aa10.07□□□□□ -0.8
COL6A2-204ENST00000409416 WFDC11Q8NEX6 87 aa10.07□□□□□ -0.8
COL6A2-204ENST00000409416 F8VRH5 84 aa10.07□□□□□ -0.8
COL6A2-204ENST00000409416 SCGB1C2P0DMR2 95 aa10.07□□□□□ -0.8
COL6A2-204ENST00000409416 PLNP26678 52 aa10.07□□□□□ -0.8
COL6A2-204ENST00000409416 GAGE13Q4V321 117 aa10.07□□□□□ -0.8
COL6A2-204ENST00000409416 RASL10AQ92737 203 aa10.07□□□□□ -0.8
COL6A2-204ENST00000409416 NBPF19A0A087WUL8 3843 aa10.06□□□□□ -0.8
COL6A2-204ENST00000409416 ORMDL2Q53FV1 153 aa10.06□□□□□ -0.8
COL6A2-204ENST00000409416 ZFAND2AQ8N6M9 145 aa10.06□□□□□ -0.8
COL6A2-204ENST00000409416 TRBV7-9A0A0J9YWB2 115 aa10.06□□□□□ -0.8
COL6A2-204ENST00000409416 MT-ATP8P03928 68 aa10.05□□□□□ -0.8
COL6A2-204ENST00000409416 DGAT2L7PQ6IED9 249 aa10.05□□□□□ -0.8
COL6A2-204ENST00000409416 LINC01356Q8N9X3 169 aa10.05□□□□□ -0.8
COL6A2-204ENST00000409416 PRADC1Q9BSG0 188 aa10.05□□□□□ -0.8
COL6A2-204ENST00000409416 FAM223BA6NKX1 122 aa10.05□□□□□ -0.8
COL6A2-204ENST00000409416 OVOL1O14753 267 aa10.05□□□□□ -0.8
COL6A2-204ENST00000409416 SLC25A16P16260 332 aa10.05□□□□□ -0.8
COL6A2-204ENST00000409416 C12orf74Q32Q52 190 aa10.05□□□□□ -0.8
COL6A2-204ENST00000409416 FAM223AQ8IWN6 122 aa10.05□□□□□ -0.8
COL6A2-204ENST00000409416 KIR2DL4Q99706 377 aa10.05□□□□□ -0.8
COL6A2-204ENST00000409416 SDHAF1A6NFY7 115 aa10.04□□□□□ -0.8
COL6A2-204ENST00000409416 A6NJY4 79 aa10.04□□□□□ -0.8
COL6A2-204ENST00000409416 NDUFA4O00483 81 aa10.04□□□□□ -0.8
COL6A2-204ENST00000409416 GAGE5Q13069 117 aa10.04□□□□□ -0.8
COL6A2-204ENST00000409416 GAGE6Q13070 117 aa10.04□□□□□ -0.8
COL6A2-204ENST00000409416 SMR3AQ99954 134 aa10.04□□□□□ -0.8
COL6A2-204ENST00000409416 ZMAT4Q9H898 229 aa10.04□□□□□ -0.8
COL6A2-204ENST00000409416 IGLL5B9A064 214 aa10.04□□□□□ -0.8
COL6A2-204ENST00000409416 Q8N1Y9 231 aa10.04□□□□□ -0.8
COL6A2-204ENST00000409416 MYMXA0A1B0GTQ4 84 aa10.03□□□□□ -0.8
COL6A2-204ENST00000409416 GPHB5Q86YW7 130 aa10.03□□□□□ -0.8
COL6A2-204ENST00000409416 TEX29Q8N6K0 151 aa10.03□□□□□ -0.8
COL6A2-204ENST00000409416 SPXQ9BT56 116 aa10.03□□□□□ -0.8
COL6A2-204ENST00000409416 HLA-DRB4P13762 266 aa10.03□□□□□ -0.8
COL6A2-204ENST00000409416 WFDC10AQ9H1F0 79 aa10.03□□□□□ -0.8
COL6A2-204ENST00000409416 HLA-DRB4X5D2U9 266 aa10.03□□□□□ -0.8
COL6A2-204ENST00000409416 IGHG2P01859 326 aa10.03□□□□□ -0.8
COL6A2-204ENST00000409416 BAALCQ8WXS3 180 aa10.03□□□□□ -0.8
COL6A2-204ENST00000409416 PGPEP1Q9NXJ5 209 aa10.03□□□□□ -0.8
COL6A2-204ENST00000409416 HIGD1BQ9P298 99 aa10.03□□□□□ -0.8
COL6A2-204ENST00000409416 TTC32Q5I0X7 151 aa10.02□□□□□ -0.81
COL6A2-204ENST00000409416 MRPL53Q96EL3 112 aaKnown RBP10.02□□□□□ -0.81
COL6A2-204ENST00000409416 A6NDX4 124 aa10.01□□□□□ -0.81
COL6A2-204ENST00000409416 U3KQE9 123 aa10.01□□□□□ -0.81
COL6A2-204ENST00000409416 TRAV2A0A0B4J234 112 aa10.01□□□□□ -0.81
COL6A2-204ENST00000409416 PSMB2P49721 201 aa10.01□□□□□ -0.81
COL6A2-204ENST00000409416 USMG5Q96IX5 58 aa10.01□□□□□ -0.81
COL6A2-204ENST00000409416 Q9UF83 564 aa10.01□□□□□ -0.81
COL6A2-204ENST00000409416 A0A096LPF7 62 aa10.01□□□□□ -0.81
COL6A2-204ENST00000409416 TMEM61Q8N0U2 210 aa10.01□□□□□ -0.81
COL6A2-204ENST00000409416 PLEKHB2Q96CS7 222 aa10.01□□□□□ -0.81
COL6A2-204ENST00000409416 RAX2Q96IS3 184 aa10.01□□□□□ -0.81
COL6A2-204ENST00000409416 PSMG3-AS1Q96PY0 264 aa10.01□□□□□ -0.81
COL6A2-204ENST00000409416 C1QTNF4Q9BXJ3 329 aa10.01□□□□□ -0.81
COL6A2-204ENST00000409416 SPANXB1Q9NS25 103 aaPredicted RBP10□□□□□ -0.81
COL6A2-204ENST00000409416 HIVEP1P15822 2718 aa10□□□□□ -0.81
COL6A2-204ENST00000409416 TRGV1A0A0A0MS02 117 aa10□□□□□ -0.81
COL6A2-204ENST00000409416 LINC01549A6NIU2 74 aa10□□□□□ -0.81
COL6A2-204ENST00000409416 RNASE3P12724 160 aaKnown RBP10□□□□□ -0.81
COL6A2-204ENST00000409416 TOMM6Q96B49 74 aa10□□□□□ -0.81
COL6A2-204ENST00000409416 ESM1Q9NQ30 184 aa10□□□□□ -0.81
COL6A2-204ENST00000409416 SUMO4Q6EEV6 95 aa10□□□□□ -0.81
COL6A2-204ENST00000409416 ZFAND6Q6FIF0 208 aa10□□□□□ -0.81
COL6A2-204ENST00000409416 C11orf68Q9H3H3 251 aaKnown RBP10□□□□□ -0.81
COL6A2-204ENST00000409416 STAB1Q9NY15 2570 aa9.99□□□□□ -0.81
COL6A2-204ENST00000409416 LGALS1P09382 135 aaKnown RBP9.99□□□□□ -0.81
COL6A2-204ENST00000409416 PTH2Q96A98 100 aa9.99□□□□□ -0.81
COL6A2-204ENST00000409416 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.99□□□□□ -0.81
COL6A2-204ENST00000409416 IGKV2-29A2NJV5 120 aaPredicted RBP9.99□□□□□ -0.81
COL6A2-204ENST00000409416 TM2D2Q9BX73 214 aa9.99□□□□□ -0.81
COL6A2-204ENST00000409416 C11orf86A6NJI1 115 aa9.98□□□□□ -0.81
COL6A2-204ENST00000409416 A8MZ25 164 aa9.98□□□□□ -0.81
COL6A2-204ENST00000409416 NEXN-AS1Q8NBZ9 246 aa9.98□□□□□ -0.81
COL6A2-204ENST00000409416 PLA2G2AP14555 144 aa9.98□□□□□ -0.81
COL6A2-204ENST00000409416 HERVK_113P61574 105 aa9.98□□□□□ -0.81
COL6A2-204ENST00000409416 FOXI2Q6ZQN5 318 aa9.98□□□□□ -0.81
COL6A2-204ENST00000409416 TNFRSF18Q9Y5U5 241 aa9.98□□□□□ -0.81
COL6A2-204ENST00000409416 DAND5Q8N907 189 aa9.97□□□□□ -0.81
COL6A2-204ENST00000409416 DLX4Q92988 240 aaPredicted RBP9.97□□□□□ -0.81
COL6A2-204ENST00000409416 LINC01546A6NGU7 62 aa9.97□□□□□ -0.81
COL6A2-204ENST00000409416 F8W1H4 67 aa9.97□□□□□ -0.81
COL6A2-204ENST00000409416 RRN3P1Q2M238 152 aa9.97□□□□□ -0.81
COL6A2-204ENST00000409416 TOMM7Q9P0U1 55 aa9.97□□□□□ -0.81
COL6A2-204ENST00000409416 LENEPQ9Y5L5 61 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms