RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 RPL39P62891 51 aaKnown RBP10.19□□□□□ -0.78
PRAME-205ENST00000405655 BEAN1Q3B7T3 259 aa10.19□□□□□ -0.78
PRAME-205ENST00000405655 PRSS47A8MTI9 375 aa10.18□□□□□ -0.78
PRAME-205ENST00000405655 PRSS1P07477 247 aa10.18□□□□□ -0.78
PRAME-205ENST00000405655 BATFQ16520 125 aa10.18□□□□□ -0.78
PRAME-205ENST00000405655 Q6ZN92 141 aa10.18□□□□□ -0.78
PRAME-205ENST00000405655 SYT8Q8NBV8 401 aa10.18□□□□□ -0.78
PRAME-205ENST00000405655 SDHAF1A6NFY7 115 aa10.18□□□□□ -0.78
PRAME-205ENST00000405655 ST20Q9HBF5 79 aa10.18□□□□□ -0.78
PRAME-205ENST00000405655 IGHV3-53P01767 116 aa10.17□□□□□ -0.78
PRAME-205ENST00000405655 MRPL52Q86TS9 123 aaKnown RBP10.17□□□□□ -0.78
PRAME-205ENST00000405655 ANK2Q01484 3957 aa10.17□□□□□ -0.78
PRAME-205ENST00000405655 C20orf202A1L168 122 aa10.16□□□□□ -0.78
PRAME-205ENST00000405655 POLR2KP53803 58 aaKnown RBP10.16□□□□□ -0.78
PRAME-205ENST00000405655 C20orf78Q9BR46 151 aa10.16□□□□□ -0.78
PRAME-205ENST00000405655 ODF1Q14990 250 aa10.16□□□□□ -0.78
PRAME-205ENST00000405655 CFAP126Q5VTH2 177 aa10.16□□□□□ -0.78
PRAME-205ENST00000405655 OPRPNQ99935 248 aaPredicted RBP10.16□□□□□ -0.78
PRAME-205ENST00000405655 TTTY13Q9BZ97 58 aa10.16□□□□□ -0.78
PRAME-205ENST00000405655 M0R2P5 195 aa10.15□□□□□ -0.78
PRAME-205ENST00000405655 Q6ZTI0 123 aa10.15□□□□□ -0.78
PRAME-205ENST00000405655 ZNF415Q09FC8 603 aa10.15□□□□□ -0.79
PRAME-205ENST00000405655 C2orf66Q6UXQ4 117 aa10.15□□□□□ -0.79
PRAME-205ENST00000405655 COL6A5A8TX70 2615 aa10.14□□□□□ -0.79
PRAME-205ENST00000405655 EMP1P54849 157 aa10.14□□□□□ -0.79
PRAME-205ENST00000405655 UFSP1Q6NVU6 142 aa10.14□□□□□ -0.79
PRAME-205ENST00000405655 ZFP2Q6ZN57 461 aa10.14□□□□□ -0.79
PRAME-205ENST00000405655 MRPL35Q9NZE8 188 aaKnown RBP10.14□□□□□ -0.79
PRAME-205ENST00000405655 UQCR10Q9UDW1 63 aa10.14□□□□□ -0.79
PRAME-205ENST00000405655 TRGV1A0A0A0MS02 117 aa10.14□□□□□ -0.79
PRAME-205ENST00000405655 IGHV3-38A0A0C4DH36 116 aa10.14□□□□□ -0.79
PRAME-205ENST00000405655 TSHBP01222 138 aa10.14□□□□□ -0.79
PRAME-205ENST00000405655 LGALS9BQ3B8N2 356 aa10.14□□□□□ -0.79
PRAME-205ENST00000405655 LGALS9CQ6DKI2 356 aa10.14□□□□□ -0.79
PRAME-205ENST00000405655 SCGB3A1Q96QR1 104 aa10.14□□□□□ -0.79
PRAME-205ENST00000405655 IGKV2D-26A0A0A0MRZ7 120 aa10.13□□□□□ -0.79
PRAME-205ENST00000405655 ZNF479Q96JC4 524 aa10.13□□□□□ -0.79
PRAME-205ENST00000405655 CITED1Q99966 193 aa10.13□□□□□ -0.79
PRAME-205ENST00000405655 NOP10Q9NPE3 64 aaKnown RBP10.13□□□□□ -0.79
PRAME-205ENST00000405655 HNRNPA3P51991 378 aaKnown RBP10.12□□□□□ -0.79
PRAME-205ENST00000405655 CSNK1G2-AS1Q8NCQ2 148 aa10.12□□□□□ -0.79
PRAME-205ENST00000405655 RNASE8Q8TDE3 154 aaKnown RBP10.12□□□□□ -0.79
PRAME-205ENST00000405655 TOMM6Q96B49 74 aa10.12□□□□□ -0.79
PRAME-205ENST00000405655 TP53TG1Q9Y2A0 90 aa10.12□□□□□ -0.79
PRAME-205ENST00000405655 PCP2Q8IVA1 136 aa10.12□□□□□ -0.79
PRAME-205ENST00000405655 PHLDA1Q8WV24 401 aaPredicted RBP10.12□□□□□ -0.79
PRAME-205ENST00000405655 PLAC8L1A1L4L8 177 aa10.11□□□□□ -0.79
PRAME-205ENST00000405655 HINT1P49773 126 aaPredicted RBP10.11□□□□□ -0.79
PRAME-205ENST00000405655 GTSCR1Q86UQ5 136 aa10.11□□□□□ -0.79
PRAME-205ENST00000405655 RIPPLY3P57055 190 aa10.11□□□□□ -0.79
PRAME-205ENST00000405655 ORMDL2Q53FV1 153 aa10.11□□□□□ -0.79
PRAME-205ENST00000405655 Q6ZVH6 145 aa10.11□□□□□ -0.79
PRAME-205ENST00000405655 CLUHP3Q96NS8 147 aa10.11□□□□□ -0.79
PRAME-205ENST00000405655 HHLA3Q9XRX5 114 aa10.11□□□□□ -0.79
PRAME-205ENST00000405655 HSBP1L1C9JCN9 74 aa10.1□□□□□ -0.79
PRAME-205ENST00000405655 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.1□□□□□ -0.79
PRAME-205ENST00000405655 VCYO14598 125 aa10.1□□□□□ -0.79
PRAME-205ENST00000405655 KRTAP24-1Q3LI83 254 aa10.1□□□□□ -0.79
PRAME-205ENST00000405655 CEMP1Q6PRD7 247 aaPredicted RBP10.1□□□□□ -0.79
PRAME-205ENST00000405655 BAALCQ8WXS3 180 aa10.1□□□□□ -0.79
PRAME-205ENST00000405655 NMUP48645 174 aa10.09□□□□□ -0.79
PRAME-205ENST00000405655 RBX1P62877 108 aa10.09□□□□□ -0.79
PRAME-205ENST00000405655 TRBV27A0A0K0K1C4 114 aa10.09□□□□□ -0.79
PRAME-205ENST00000405655 NEXN-AS1Q8NBZ9 246 aa10.09□□□□□ -0.79
PRAME-205ENST00000405655 IL17DQ8TAD2 202 aa10.09□□□□□ -0.79
PRAME-205ENST00000405655 NOTCH1P46531 2555 aa10.09□□□□□ -0.79
PRAME-205ENST00000405655 TRBV6-5A0A0K0K1A5 114 aa10.08□□□□□ -0.8
PRAME-205ENST00000405655 GAGE12BA1L429 117 aa10.08□□□□□ -0.8
PRAME-205ENST00000405655 ATP5LO75964 103 aa10.08□□□□□ -0.8
PRAME-205ENST00000405655 GAGE7O76087 117 aa10.08□□□□□ -0.8
PRAME-205ENST00000405655 GAGE12FP0CL80 117 aa10.08□□□□□ -0.8
PRAME-205ENST00000405655 GAGE12GP0CL81 117 aa10.08□□□□□ -0.8
PRAME-205ENST00000405655 GAGE12IP0CL82 117 aa10.08□□□□□ -0.8
PRAME-205ENST00000405655 RNASE13Q5GAN3 156 aaKnown RBP10.08□□□□□ -0.8
PRAME-205ENST00000405655 LINC00467Q9BRT7 94 aa10.08□□□□□ -0.8
PRAME-205ENST00000405655 ZMAT4Q9H898 229 aa10.08□□□□□ -0.8
PRAME-205ENST00000405655 PRSS29PA6NIE9 313 aa10.08□□□□□ -0.8
PRAME-205ENST00000405655 A8MWV9 139 aa10.08□□□□□ -0.8
PRAME-205ENST00000405655 FGF6P10767 208 aa10.08□□□□□ -0.8
PRAME-205ENST00000405655 CMC4P56277 68 aaPredicted RBP10.08□□□□□ -0.8
PRAME-205ENST00000405655 KIR2DL4Q99706 377 aa10.08□□□□□ -0.8
PRAME-205ENST00000405655 A0A087WX48 190 aa10.07□□□□□ -0.8
PRAME-205ENST00000405655 DEFB4AO15263 64 aa10.07□□□□□ -0.8
PRAME-205ENST00000405655 RS1O15537 224 aa10.07□□□□□ -0.8
PRAME-205ENST00000405655 IGKCP01834 107 aa10.07□□□□□ -0.8
PRAME-205ENST00000405655 SLC25A34Q6PIV7 304 aa10.07□□□□□ -0.8
PRAME-205ENST00000405655 IGIPA6NJ69 53 aa10.07□□□□□ -0.8
PRAME-205ENST00000405655 C2orf91Q6ZV80 131 aa10.07□□□□□ -0.8
PRAME-205ENST00000405655 OR4C5Q8NGB2 326 aa10.07□□□□□ -0.8
PRAME-205ENST00000405655 LOC100131303A0A0U1RQF7 123 aa10.06□□□□□ -0.8
PRAME-205ENST00000405655 PPP1R17O96001 155 aa10.06□□□□□ -0.8
PRAME-205ENST00000405655 TMEM263Q8WUH6 116 aaKnown RBP10.06□□□□□ -0.8
PRAME-205ENST00000405655 SPXQ9BT56 116 aa10.06□□□□□ -0.8
PRAME-205ENST00000405655 CYSLTR1Q9Y271 337 aa10.06□□□□□ -0.8
PRAME-205ENST00000405655 I3L3M4 83 aa10.05□□□□□ -0.8
PRAME-205ENST00000405655 DPM2O94777 84 aa10.05□□□□□ -0.8
PRAME-205ENST00000405655 COX8AP10176 69 aa10.05□□□□□ -0.8
PRAME-205ENST00000405655 MPV17L2Q567V2 206 aa10.05□□□□□ -0.8
PRAME-205ENST00000405655 ERASQ7Z444 233 aa10.05□□□□□ -0.8
PRAME-205ENST00000405655 CHTOPQ9Y3Y2 248 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms