RNA–Protein interactions for RNA: ENST00000405375.5

CDKN1A-203, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-203ENST00000405375 C11orf86A6NJI1 115 aa11.92□□□□□ -0.5
CDKN1A-203ENST00000405375 K7ERJ3 54 aa11.91□□□□□ -0.5
CDKN1A-203ENST00000405375 NSUN5P1Q3KNT7 163 aa11.91□□□□□ -0.5
CDKN1A-203ENST00000405375 TRBV7-3A0A075B6L6 115 aa11.91□□□□□ -0.5
CDKN1A-203ENST00000405375 RBX1P62877 108 aa11.91□□□□□ -0.5
CDKN1A-203ENST00000405375 RHOHQ15669 191 aa11.91□□□□□ -0.5
CDKN1A-203ENST00000405375 KHDC1LQ5JSQ8 128 aa11.91□□□□□ -0.5
CDKN1A-203ENST00000405375 KLHL30-AS1Q8NEE0 82 aa11.91□□□□□ -0.5
CDKN1A-203ENST00000405375 SPAG8Q99932 426 aaPredicted RBP11.91□□□□□ -0.5
CDKN1A-203ENST00000405375 PAPPA-AS1Q5QFB9 102 aa11.9□□□□□ -0.5
CDKN1A-203ENST00000405375 Q6ZSV7 163 aa11.9□□□□□ -0.5
CDKN1A-203ENST00000405375 WFDC11Q8NEX6 87 aa11.9□□□□□ -0.5
CDKN1A-203ENST00000405375 NHP2Q9NX24 153 aaKnown RBP11.9□□□□□ -0.5
CDKN1A-203ENST00000405375 KMT2BQ9UMN6 2715 aaPredicted RBP11.9□□□□□ -0.5
CDKN1A-203ENST00000405375 MAP6D1Q9H9H5 199 aa11.9□□□□□ -0.5
CDKN1A-203ENST00000405375 EDA2RQ9HAV5 297 aa11.9□□□□□ -0.5
CDKN1A-203ENST00000405375 P0DMU3 169 aa11.89□□□□□ -0.51
CDKN1A-203ENST00000405375 FAM231AP0DMU4 169 aa11.89□□□□□ -0.51
CDKN1A-203ENST00000405375 FAM231CP0DMU5 169 aa11.89□□□□□ -0.51
CDKN1A-203ENST00000405375 DEFB114Q30KQ6 69 aa11.89□□□□□ -0.51
CDKN1A-203ENST00000405375 SAMD5Q5TGI4 173 aa11.89□□□□□ -0.51
CDKN1A-203ENST00000405375 HIST2H2BDQ6DRA6 164 aa11.89□□□□□ -0.51
CDKN1A-203ENST00000405375 HIST1H4GQ99525 98 aa11.89□□□□□ -0.51
CDKN1A-203ENST00000405375 EMP1P54849 157 aa11.89□□□□□ -0.51
CDKN1A-203ENST00000405375 HTN1P15515 57 aa11.88□□□□□ -0.51
CDKN1A-203ENST00000405375 DYNLRB2Q8TF09 96 aa11.88□□□□□ -0.51
CDKN1A-203ENST00000405375 I3L3M4 83 aa11.88□□□□□ -0.51
CDKN1A-203ENST00000405375 FABP2P12104 132 aa11.88□□□□□ -0.51
CDKN1A-203ENST00000405375 CD300EQ496F6 205 aaPredicted RBP11.88□□□□□ -0.51
CDKN1A-203ENST00000405375 SPCS1Q9Y6A9 102 aa11.88□□□□□ -0.51
CDKN1A-203ENST00000405375 DNAJC9-AS1A6NH13 148 aa11.87□□□□□ -0.51
CDKN1A-203ENST00000405375 PRM2P04554 102 aa11.87□□□□□ -0.51
CDKN1A-203ENST00000405375 C20orf203Q8NBC4 194 aa11.87□□□□□ -0.51
CDKN1A-203ENST00000405375 ZNRF2Q8NHG8 242 aa11.87□□□□□ -0.51
CDKN1A-203ENST00000405375 AKAP9Q99996 3911 aa11.87□□□□□ -0.51
CDKN1A-203ENST00000405375 CCDC168Q8NDH2 2452 aa11.87□□□□□ -0.51
CDKN1A-203ENST00000405375 ZNF815PA8K554 130 aa11.86□□□□□ -0.51
CDKN1A-203ENST00000405375 OCIAD2Q56VL3 154 aa11.86□□□□□ -0.51
CDKN1A-203ENST00000405375 PIK3CD-AS1Q5SR53 167 aa11.86□□□□□ -0.51
CDKN1A-203ENST00000405375 TEX29Q8N6K0 151 aa11.86□□□□□ -0.51
CDKN1A-203ENST00000405375 PLA2G2AP14555 144 aa11.86□□□□□ -0.51
CDKN1A-203ENST00000405375 C12orf74Q32Q52 190 aa11.86□□□□□ -0.51
CDKN1A-203ENST00000405375 OR5A1Q8NGJ0 315 aa11.86□□□□□ -0.51
CDKN1A-203ENST00000405375 A0A1B0GWB2 263 aa11.85□□□□□ -0.51
CDKN1A-203ENST00000405375 M0R2P5 195 aa11.85□□□□□ -0.51
CDKN1A-203ENST00000405375 PCP4P48539 62 aa11.85□□□□□ -0.51
CDKN1A-203ENST00000405375 NACAE9PAV3 2078 aa11.85□□□□□ -0.51
CDKN1A-203ENST00000405375 PROK1P58294 105 aa11.85□□□□□ -0.51
CDKN1A-203ENST00000405375 HERVK_113P61574 105 aa11.85□□□□□ -0.51
CDKN1A-203ENST00000405375 PTH2Q96A98 100 aa11.85□□□□□ -0.51
CDKN1A-203ENST00000405375 RAX2Q96IS3 184 aa11.85□□□□□ -0.51
CDKN1A-203ENST00000405375 OPRPNQ99935 248 aaPredicted RBP11.85□□□□□ -0.51
CDKN1A-203ENST00000405375 FLNAP21333 2647 aaKnown RBP11.85□□□□□ -0.51
CDKN1A-203ENST00000405375 A8MWV9 139 aa11.84□□□□□ -0.51
CDKN1A-203ENST00000405375 NFE4Q86UQ8 179 aa11.84□□□□□ -0.51
CDKN1A-203ENST00000405375 PLEKHB2Q96CS7 222 aa11.84□□□□□ -0.51
CDKN1A-203ENST00000405375 LINC00467Q9BRT7 94 aa11.84□□□□□ -0.51
CDKN1A-203ENST00000405375 ESM1Q9NQ30 184 aa11.84□□□□□ -0.51
CDKN1A-203ENST00000405375 IGHV3-73A0A0B4J1V6 119 aa11.84□□□□□ -0.51
CDKN1A-203ENST00000405375 ZNF415Q09FC8 603 aa11.84□□□□□ -0.51
CDKN1A-203ENST00000405375 FHL3Q13643 280 aa11.84□□□□□ -0.51
CDKN1A-203ENST00000405375 C11orf72Q8NBR9 251 aa11.84□□□□□ -0.51
CDKN1A-203ENST00000405375 CUBNO60494 3623 aa11.84□□□□□ -0.51
CDKN1A-203ENST00000405375 IGLL5B9A064 214 aa11.83□□□□□ -0.52
CDKN1A-203ENST00000405375 J3QKU1 62 aa11.83□□□□□ -0.52
CDKN1A-203ENST00000405375 SCGB2A2Q13296 93 aa11.83□□□□□ -0.52
CDKN1A-203ENST00000405375 TMEM170BQ5T4T1 132 aa11.83□□□□□ -0.52
CDKN1A-203ENST00000405375 TSPEAR-AS2P59090 65 aa11.82□□□□□ -0.52
CDKN1A-203ENST00000405375 ODF3L2Q3SX64 289 aa11.82□□□□□ -0.52
CDKN1A-203ENST00000405375 SCGB1D4Q6XE38 83 aa11.82□□□□□ -0.52
CDKN1A-203ENST00000405375 CLUHP3Q96NS8 147 aa11.82□□□□□ -0.52
CDKN1A-203ENST00000405375 HELZ2Q9BYK8 2649 aaKnown RBP11.81□□□□□ -0.52
CDKN1A-203ENST00000405375 IGLV4-3A0A075B6K6 122 aa11.81□□□□□ -0.52
CDKN1A-203ENST00000405375 INSP01308 110 aa11.81□□□□□ -0.52
CDKN1A-203ENST00000405375 CFAP126Q5VTH2 177 aa11.81□□□□□ -0.52
CDKN1A-203ENST00000405375 Q6ZSN1 163 aa11.81□□□□□ -0.52
CDKN1A-203ENST00000405375 LINC01587Q99440 93 aa11.81□□□□□ -0.52
CDKN1A-203ENST00000405375 TRAV25A0A0B4J276 109 aa11.8□□□□□ -0.52
CDKN1A-203ENST00000405375 A0A0J9YY99 117 aa11.8□□□□□ -0.52
CDKN1A-203ENST00000405375 KRTAP1-1Q07627 177 aa11.8□□□□□ -0.52
CDKN1A-203ENST00000405375 C11orf44Q8N8P7 122 aa11.8□□□□□ -0.52
CDKN1A-203ENST00000405375 ZNF479Q96JC4 524 aa11.8□□□□□ -0.52
CDKN1A-203ENST00000405375 AMELXQ99217 191 aa11.8□□□□□ -0.52
CDKN1A-203ENST00000405375 Q9UF83 564 aa11.8□□□□□ -0.52
CDKN1A-203ENST00000405375 NF1P21359 2839 aa11.8□□□□□ -0.52
CDKN1A-203ENST00000405375 WNK1Q9H4A3 2382 aa11.8□□□□□ -0.52
CDKN1A-203ENST00000405375 FAM104AQ969W3 186 aa11.8□□□□□ -0.52
CDKN1A-203ENST00000405375 PYGO1Q9Y3Y4 419 aa11.8□□□□□ -0.52
CDKN1A-203ENST00000405375 PDZD2O15018 2839 aa11.79□□□□□ -0.52
CDKN1A-203ENST00000405375 BEAN1Q3B7T3 259 aa11.79□□□□□ -0.52
CDKN1A-203ENST00000405375 CCL24O00175 119 aa11.79□□□□□ -0.52
CDKN1A-203ENST00000405375 CD28P10747 220 aa11.79□□□□□ -0.52
CDKN1A-203ENST00000405375 SPXQ9BT56 116 aa11.79□□□□□ -0.52
CDKN1A-203ENST00000405375 TNFRSF18Q9Y5U5 241 aa11.79□□□□□ -0.52
CDKN1A-203ENST00000405375 A0A1W2PRX2 142 aa11.78□□□□□ -0.52
CDKN1A-203ENST00000405375 TMEM223A0PJW6 202 aa11.78□□□□□ -0.52
CDKN1A-203ENST00000405375 RRN3P1Q2M238 152 aa11.78□□□□□ -0.52
CDKN1A-203ENST00000405375 J3QQQ9 107 aa11.77□□□□□ -0.52
CDKN1A-203ENST00000405375 K7ERU9 68 aa11.77□□□□□ -0.52
CDKN1A-203ENST00000405375 SRSF9Q13242 221 aaKnown RBP eCLIP11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms