RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 CRYBA4P53673 196 aa7.91□□□□□ -1.14
CLIP4-204ENST00000404424 VCX2Q9H322 139 aa7.91□□□□□ -1.14
CLIP4-204ENST00000404424 PRO1854Q9UHT4 67 aa7.91□□□□□ -1.14
CLIP4-204ENST00000404424 PYGO1Q9Y3Y4 419 aa7.91□□□□□ -1.14
CLIP4-204ENST00000404424 IGLV4-3A0A075B6K6 122 aa7.91□□□□□ -1.14
CLIP4-204ENST00000404424 ZNF22P17026 224 aaPredicted RBP7.91□□□□□ -1.14
CLIP4-204ENST00000404424 HOXD3P31249 432 aaPredicted RBP7.91□□□□□ -1.14
CLIP4-204ENST00000404424 SMCPP49901 116 aaPredicted RBP7.91□□□□□ -1.14
CLIP4-204ENST00000404424 OPRPNQ99935 248 aaPredicted RBP7.91□□□□□ -1.14
CLIP4-204ENST00000404424 VPREB3Q9UKI3 123 aa7.9□□□□□ -1.14
CLIP4-204ENST00000404424 PIK3CD-AS1Q5SR53 167 aa7.9□□□□□ -1.15
CLIP4-204ENST00000404424 A8MTW9 85 aa7.89□□□□□ -1.15
CLIP4-204ENST00000404424 INSL3P51460 131 aa7.89□□□□□ -1.15
CLIP4-204ENST00000404424 A0A096LNT2 108 aa7.89□□□□□ -1.15
CLIP4-204ENST00000404424 TCL1BO95988 128 aa7.89□□□□□ -1.15
CLIP4-204ENST00000404424 SMAGPQ0VAQ4 97 aa7.89□□□□□ -1.15
CLIP4-204ENST00000404424 TCTEX1D4Q5JR98 221 aa7.89□□□□□ -1.15
CLIP4-204ENST00000404424 SBSPONQ8IVN8 264 aa7.89□□□□□ -1.15
CLIP4-204ENST00000404424 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.88□□□□□ -1.15
CLIP4-204ENST00000404424 TRAV2A0A0B4J234 112 aa7.88□□□□□ -1.15
CLIP4-204ENST00000404424 A0A0B4J2C4 111 aa7.88□□□□□ -1.15
CLIP4-204ENST00000404424 A8MWV9 139 aa7.88□□□□□ -1.15
CLIP4-204ENST00000404424 Q5PR19 223 aa7.88□□□□□ -1.15
CLIP4-204ENST00000404424 SFTA2Q6UW10 78 aa7.88□□□□□ -1.15
CLIP4-204ENST00000404424 ZNF702PQ9H963 129 aa7.88□□□□□ -1.15
CLIP4-204ENST00000404424 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.88□□□□□ -1.15
CLIP4-204ENST00000404424 A0A0J9YXV3 536 aa7.88□□□□□ -1.15
CLIP4-204ENST00000404424 A4D1N5 150 aa7.88□□□□□ -1.15
CLIP4-204ENST00000404424 TGFAP01135 160 aa7.88□□□□□ -1.15
CLIP4-204ENST00000404424 SCGB1C2P0DMR2 95 aa7.88□□□□□ -1.15
CLIP4-204ENST00000404424 Q6YL49 198 aa7.88□□□□□ -1.15
CLIP4-204ENST00000404424 TEN1Q86WV5 123 aa7.88□□□□□ -1.15
CLIP4-204ENST00000404424 ZNF418Q8TF45 676 aaPredicted RBP7.88□□□□□ -1.15
CLIP4-204ENST00000404424 PTH2Q96A98 100 aa7.88□□□□□ -1.15
CLIP4-204ENST00000404424 DUX5Q96PT3 197 aa7.88□□□□□ -1.15
CLIP4-204ENST00000404424 RBMY1A1P0DJD3 496 aaKnown RBP7.87□□□□□ -1.15
CLIP4-204ENST00000404424 RBMY1CP0DJD4 496 aa7.87□□□□□ -1.15
CLIP4-204ENST00000404424 MRPS36P82909 103 aaKnown RBP7.87□□□□□ -1.15
CLIP4-204ENST00000404424 RBMY1FQ15415 496 aaKnown RBP7.87□□□□□ -1.15
CLIP4-204ENST00000404424 PPDPFLQ8WWR9 84 aa7.87□□□□□ -1.15
CLIP4-204ENST00000404424 TNFRSF18Q9Y5U5 241 aa7.87□□□□□ -1.15
CLIP4-204ENST00000404424 M0R2P5 195 aa7.87□□□□□ -1.15
CLIP4-204ENST00000404424 CD28P10747 220 aa7.87□□□□□ -1.15
CLIP4-204ENST00000404424 H3BMM0 161 aa7.86□□□□□ -1.15
CLIP4-204ENST00000404424 M0QXV9 152 aa7.86□□□□□ -1.15
CLIP4-204ENST00000404424 FSHBP01225 129 aa7.86□□□□□ -1.15
CLIP4-204ENST00000404424 IGHV3-33P01772 117 aa7.86□□□□□ -1.15
CLIP4-204ENST00000404424 DEFB131AP59861 70 aa7.86□□□□□ -1.15
CLIP4-204ENST00000404424 MUSTN1Q8IVN3 82 aa7.86□□□□□ -1.15
CLIP4-204ENST00000404424 TMEM263Q8WUH6 116 aaKnown RBP7.86□□□□□ -1.15
CLIP4-204ENST00000404424 ERG28Q9UKR5 140 aa7.86□□□□□ -1.15
CLIP4-204ENST00000404424 NCOR2Q9Y618 2525 aa7.86□□□□□ -1.15
CLIP4-204ENST00000404424 SPTBN4Q9H254 2564 aa7.86□□□□□ -1.15
CLIP4-204ENST00000404424 KNCNA6PVL3 124 aa7.86□□□□□ -1.15
CLIP4-204ENST00000404424 ZNF415Q09FC8 603 aa7.86□□□□□ -1.15
CLIP4-204ENST00000404424 TIMM21Q9BVV7 248 aa7.86□□□□□ -1.15
CLIP4-204ENST00000404424 CELSR1Q9NYQ6 3014 aa7.85□□□□□ -1.15
CLIP4-204ENST00000404424 A0A0J9YXY3 114 aa7.85□□□□□ -1.15
CLIP4-204ENST00000404424 IGHV3-30-3P0DP02 117 aa7.85□□□□□ -1.15
CLIP4-204ENST00000404424 NRGNQ92686 78 aa7.85□□□□□ -1.15
CLIP4-204ENST00000404424 DUX3Q96PT4 197 aa7.85□□□□□ -1.15
CLIP4-204ENST00000404424 SPANXA1Q9NS26 97 aa7.85□□□□□ -1.15
CLIP4-204ENST00000404424 PEMTQ9UBM1 199 aa7.85□□□□□ -1.15
CLIP4-204ENST00000404424 CSPG4Q6UVK1 2322 aa7.85□□□□□ -1.15
CLIP4-204ENST00000404424 IGHV3-64A0A075B6Q5 118 aa7.85□□□□□ -1.15
CLIP4-204ENST00000404424 HTN1P15515 57 aa7.85□□□□□ -1.15
CLIP4-204ENST00000404424 FAM104AQ969W3 186 aa7.85□□□□□ -1.15
CLIP4-204ENST00000404424 LINC00467Q9BRT7 94 aa7.85□□□□□ -1.15
CLIP4-204ENST00000404424 SPXQ9BT56 116 aa7.85□□□□□ -1.15
CLIP4-204ENST00000404424 IGHV3-73A0A0B4J1V6 119 aa7.84□□□□□ -1.15
CLIP4-204ENST00000404424 IGHV1-58A0A0C4DH39 117 aa7.84□□□□□ -1.15
CLIP4-204ENST00000404424 TINCRA0A1B0GVN0 87 aa7.84□□□□□ -1.15
CLIP4-204ENST00000404424 RAX2Q96IS3 184 aa7.84□□□□□ -1.15
CLIP4-204ENST00000404424 DNAJC30Q96LL9 226 aa7.84□□□□□ -1.15
CLIP4-204ENST00000404424 DOPEY2Q9Y3R5 2298 aa7.84□□□□□ -1.16
CLIP4-204ENST00000404424 CDIP1Q9H305 208 aa7.84□□□□□ -1.16
CLIP4-204ENST00000404424 CHD8Q9HCK8 2581 aa7.83□□□□□ -1.16
CLIP4-204ENST00000404424 EIF4EBP3O60516 100 aaPredicted RBP7.83□□□□□ -1.16
CLIP4-204ENST00000404424 CIDEAO60543 219 aa7.83□□□□□ -1.16
CLIP4-204ENST00000404424 SLURP1P55000 103 aa7.83□□□□□ -1.16
CLIP4-204ENST00000404424 PROK1P58294 105 aa7.83□□□□□ -1.16
CLIP4-204ENST00000404424 Q8N2B8 174 aa7.83□□□□□ -1.16
CLIP4-204ENST00000404424 CARD19Q96LW7 228 aa7.83□□□□□ -1.16
CLIP4-204ENST00000404424 A0A1B0GV72 72 aa7.83□□□□□ -1.16
CLIP4-204ENST00000404424 RBMY1BA6NDE4 496 aaKnown RBP7.83□□□□□ -1.16
CLIP4-204ENST00000404424 RBMY1EA6NEQ0 496 aaKnown RBP7.83□□□□□ -1.16
CLIP4-204ENST00000404424 RBMY1DP0C7P1 496 aaKnown RBP7.83□□□□□ -1.16
CLIP4-204ENST00000404424 CHCHD7Q9BUK0 85 aa7.83□□□□□ -1.16
CLIP4-204ENST00000404424 SPANXDQ9BXN6 97 aa7.83□□□□□ -1.16
CLIP4-204ENST00000404424 SPANXCQ9NY87 97 aa7.83□□□□□ -1.16
CLIP4-204ENST00000404424 UBE2D4Q9Y2X8 147 aa7.83□□□□□ -1.16
CLIP4-204ENST00000404424 SPG11Q96JI7 2443 aa7.82□□□□□ -1.16
CLIP4-204ENST00000404424 SLC25A20O43772 301 aa7.82□□□□□ -1.16
CLIP4-204ENST00000404424 LITAFQ99732 161 aa7.82□□□□□ -1.16
CLIP4-204ENST00000404424 BEX4Q9NWD9 120 aaPredicted RBP7.82□□□□□ -1.16
CLIP4-204ENST00000404424 IGHV4-31P0DP07 118 aa7.81□□□□□ -1.16
CLIP4-204ENST00000404424 ATXN8Q156A1 80 aa7.81□□□□□ -1.16
CLIP4-204ENST00000404424 MAPK1IP1LQ8NDC0 245 aa7.81□□□□□ -1.16
CLIP4-204ENST00000404424 TRBV30A0A0K0K1B3 111 aa7.81□□□□□ -1.16
CLIP4-204ENST00000404424 TMEM262E9PQX1 116 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms