RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 SMIM7Q9BQ49 75 aa12.15□□□□□ -0.46
PTPRN2-204ENST00000404321 CTRLP40313 264 aa12.14□□□□□ -0.47
PTPRN2-204ENST00000404321 LAGE3Q14657 143 aa12.14□□□□□ -0.47
PTPRN2-204ENST00000404321 DNAJC30Q96LL9 226 aa12.14□□□□□ -0.47
PTPRN2-204ENST00000404321 PCLOQ9Y6V0 5065 aa12.13□□□□□ -0.47
PTPRN2-204ENST00000404321 A0A087WX48 190 aa12.13□□□□□ -0.47
PTPRN2-204ENST00000404321 TRBV6-8A0A0A6YYG3 113 aa12.13□□□□□ -0.47
PTPRN2-204ENST00000404321 TMEM262E9PQX1 116 aa12.13□□□□□ -0.47
PTPRN2-204ENST00000404321 GATCO43716 136 aaKnown RBP12.13□□□□□ -0.47
PTPRN2-204ENST00000404321 TRGC1P0CF51 173 aa12.13□□□□□ -0.47
PTPRN2-204ENST00000404321 TWIST1Q15672 202 aa12.13□□□□□ -0.47
PTPRN2-204ENST00000404321 GTSF1Q8WW33 167 aa12.13□□□□□ -0.47
PTPRN2-204ENST00000404321 PGPEP1Q9NXJ5 209 aa12.13□□□□□ -0.47
PTPRN2-204ENST00000404321 KLK12Q9UKR0 248 aa12.13□□□□□ -0.47
PTPRN2-204ENST00000404321 LRCOL1A6NCL2 159 aa12.12□□□□□ -0.47
PTPRN2-204ENST00000404321 ZNF727A8MUV8 499 aa12.12□□□□□ -0.47
PTPRN2-204ENST00000404321 M0QY20 66 aa12.12□□□□□ -0.47
PTPRN2-204ENST00000404321 SRP19P09132 144 aaKnown RBP12.12□□□□□ -0.47
PTPRN2-204ENST00000404321 APOBP04114 4563 aaKnown RBP12.11□□□□□ -0.47
PTPRN2-204ENST00000404321 KCNIP4Q6PIL6 250 aa12.11□□□□□ -0.47
PTPRN2-204ENST00000404321 TEX261Q6UWH6 196 aa12.11□□□□□ -0.47
PTPRN2-204ENST00000404321 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.11□□□□□ -0.47
PTPRN2-204ENST00000404321 DPH3P1Q9H4G8 78 aa12.11□□□□□ -0.47
PTPRN2-204ENST00000404321 HSPG2P98160 4391 aa12.1□□□□□ -0.47
PTPRN2-204ENST00000404321 TRAV8-3A0A0A6YYJ7 113 aa12.1□□□□□ -0.47
PTPRN2-204ENST00000404321 CDK2AP2O75956 126 aa12.1□□□□□ -0.47
PTPRN2-204ENST00000404321 NTM-AS1Q6ZSK4 140 aa12.1□□□□□ -0.47
PTPRN2-204ENST00000404321 LINC01551Q86U37 167 aa12.1□□□□□ -0.47
PTPRN2-204ENST00000404321 PGLYRP4Q96LB8 373 aa12.1□□□□□ -0.47
PTPRN2-204ENST00000404321 CHCHD5Q9BSY4 110 aa12.1□□□□□ -0.47
PTPRN2-204ENST00000404321 H7C1H1 209 aa12.09□□□□□ -0.47
PTPRN2-204ENST00000404321 LECT2O14960 151 aa12.09□□□□□ -0.47
PTPRN2-204ENST00000404321 CDPF1Q6NVV7 123 aa12.09□□□□□ -0.47
PTPRN2-204ENST00000404321 WDR73Q6P4I2 378 aa12.09□□□□□ -0.47
PTPRN2-204ENST00000404321 FAM231DQ6ZW35 169 aa12.09□□□□□ -0.47
PTPRN2-204ENST00000404321 DEFB104AQ8WTQ1 72 aa12.09□□□□□ -0.47
PTPRN2-204ENST00000404321 UBE2WQ96B02 151 aa12.09□□□□□ -0.47
PTPRN2-204ENST00000404321 TM2D2Q9BX73 214 aa12.09□□□□□ -0.47
PTPRN2-204ENST00000404321 C9JQL5 133 aa12.08□□□□□ -0.48
PTPRN2-204ENST00000404321 FOXA3P55318 350 aaPredicted RBP12.08□□□□□ -0.48
PTPRN2-204ENST00000404321 WFDC2Q14508 124 aa12.08□□□□□ -0.48
PTPRN2-204ENST00000404321 MPV17L2Q567V2 206 aa12.08□□□□□ -0.48
PTPRN2-204ENST00000404321 RASL11AQ6T310 242 aa12.08□□□□□ -0.48
PTPRN2-204ENST00000404321 CNFNQ9BYD5 112 aa12.08□□□□□ -0.48
PTPRN2-204ENST00000404321 KRTAP17-1Q9BYP8 105 aa12.08□□□□□ -0.48
PTPRN2-204ENST00000404321 TRAV26-2A0A0B4J265 109 aa12.07□□□□□ -0.48
PTPRN2-204ENST00000404321 A8MWL6 223 aa12.07□□□□□ -0.48
PTPRN2-204ENST00000404321 SRSF3P84103 164 aaKnown RBP12.07□□□□□ -0.48
PTPRN2-204ENST00000404321 C15orf54Q8N8G6 183 aa12.07□□□□□ -0.48
PTPRN2-204ENST00000404321 ABCA13Q86UQ4 5058 aa12.07□□□□□ -0.48
PTPRN2-204ENST00000404321 IGKV2D-24A0A075B6R9 120 aa12.06□□□□□ -0.48
PTPRN2-204ENST00000404321 KRTAP10-1P60331 282 aa12.06□□□□□ -0.48
PTPRN2-204ENST00000404321 Q8N814 137 aa12.06□□□□□ -0.48
PTPRN2-204ENST00000404321 MAPKAPK5-AS1Q8N8E1 139 aa12.06□□□□□ -0.48
PTPRN2-204ENST00000404321 Q8N976 141 aa12.06□□□□□ -0.48
PTPRN2-204ENST00000404321 CHCHD7Q9BUK0 85 aa12.06□□□□□ -0.48
PTPRN2-204ENST00000404321 IGLV5-52A0A0A0MRZ9 124 aa12.05□□□□□ -0.48
PTPRN2-204ENST00000404321 NDUFS6O75380 124 aaKnown RBP12.05□□□□□ -0.48
PTPRN2-204ENST00000404321 GAGE6Q13070 117 aa12.05□□□□□ -0.48
PTPRN2-204ENST00000404321 ELOBQ15370 118 aa12.05□□□□□ -0.48
PTPRN2-204ENST00000404321 TRBV25-1A0A075B6N4 114 aa12.05□□□□□ -0.48
PTPRN2-204ENST00000404321 ANGP03950 147 aaKnown RBP12.05□□□□□ -0.48
PTPRN2-204ENST00000404321 TMEM97Q5BJF2 176 aa12.05□□□□□ -0.48
PTPRN2-204ENST00000404321 CT83Q5H943 113 aa12.05□□□□□ -0.48
PTPRN2-204ENST00000404321 GATD1Q8NB37 220 aa12.05□□□□□ -0.48
PTPRN2-204ENST00000404321 BAALCQ8WXS3 180 aa12.05□□□□□ -0.48
PTPRN2-204ENST00000404321 KRTAP4-5Q9BYR2 181 aa12.05□□□□□ -0.48
PTPRN2-204ENST00000404321 NIT2Q9NQR4 276 aa12.05□□□□□ -0.48
PTPRN2-204ENST00000404321 TMEM241Q24JQ0 296 aa12.04□□□□□ -0.48
PTPRN2-204ENST00000404321 ATRAIDQ6UW56 229 aa12.04□□□□□ -0.48
PTPRN2-204ENST00000404321 SMIM15Q7Z3B0 74 aa12.04□□□□□ -0.48
PTPRN2-204ENST00000404321 TSKUQ8WUA8 353 aa12.04□□□□□ -0.48
PTPRN2-204ENST00000404321 RMI2Q96E14 147 aa12.04□□□□□ -0.48
PTPRN2-204ENST00000404321 IGHV1-24A0A0C4DH33 117 aa12.03□□□□□ -0.48
PTPRN2-204ENST00000404321 GCSHP23434 173 aa12.03□□□□□ -0.48
PTPRN2-204ENST00000404321 PEA15Q15121 130 aa12.03□□□□□ -0.48
PTPRN2-204ENST00000404321 ENHOQ6UWT2 76 aa12.03□□□□□ -0.48
PTPRN2-204ENST00000404321 BORCS7Q96B45 105 aa12.03□□□□□ -0.48
PTPRN2-204ENST00000404321 RPL39LQ96EH5 51 aaKnown RBP12.03□□□□□ -0.48
PTPRN2-204ENST00000404321 OSTCQ9NRP0 149 aa12.03□□□□□ -0.48
PTPRN2-204ENST00000404321 HIGD1CA8MV81 97 aa12.02□□□□□ -0.49
PTPRN2-204ENST00000404321 CRPP02741 224 aa12.02□□□□□ -0.49
PTPRN2-204ENST00000404321 RPL23P62829 140 aaKnown RBP12.02□□□□□ -0.49
PTPRN2-204ENST00000404321 RBX1P62877 108 aa12.02□□□□□ -0.49
PTPRN2-204ENST00000404321 ADIRFQ15847 76 aa12.02□□□□□ -0.49
PTPRN2-204ENST00000404321 IQCJQ1A5X6 159 aa12.02□□□□□ -0.49
PTPRN2-204ENST00000404321 CLPSL2Q6UWE3 100 aa12.02□□□□□ -0.49
PTPRN2-204ENST00000404321 FAM74A3Q4VXF1 159 aa12.01□□□□□ -0.49
PTPRN2-204ENST00000404321 ISOC2Q96AB3 205 aa12.01□□□□□ -0.49
PTPRN2-204ENST00000404321 COX11Q9Y6N1 276 aa12.01□□□□□ -0.49
PTPRN2-204ENST00000404321 V9GYV3 84 aa12.01□□□□□ -0.49
PTPRN2-204ENST00000404321 IGLV2-33A0A075B6J2 118 aaPredicted RBP12□□□□□ -0.49
PTPRN2-204ENST00000404321 PKIAP61925 76 aa12□□□□□ -0.49
PTPRN2-204ENST00000404321 Q0VG73 95 aa12□□□□□ -0.49
PTPRN2-204ENST00000404321 NTN5Q8WTR8 489 aaPredicted RBP12□□□□□ -0.49
PTPRN2-204ENST00000404321 A0A1B0GUT8 65 aa11.99□□□□□ -0.49
PTPRN2-204ENST00000404321 HAMPP81172 84 aa11.99□□□□□ -0.49
PTPRN2-204ENST00000404321 LINC00269Q8N2A0 174 aa11.99□□□□□ -0.49
PTPRN2-204ENST00000404321 TMEM243Q9BU79 118 aa11.99□□□□□ -0.49
PTPRN2-204ENST00000404321 C1orf43Q9BWL3 253 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms