RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 GAGE5Q13069 117 aa23.15■■□□□ 1.3
CSNK1E-204ENST00000403904 MRPL51Q4U2R6 128 aaKnown RBP23.15■■□□□ 1.3
CSNK1E-204ENST00000403904 GAGE13Q4V321 117 aa23.15■■□□□ 1.3
CSNK1E-204ENST00000403904 GAS8-AS1O95177 125 aa23.14■■□□□ 1.29
CSNK1E-204ENST00000403904 MRPL23Q16540 153 aaKnown RBP23.14■■□□□ 1.29
CSNK1E-204ENST00000403904 NEXN-AS1Q8NBZ9 246 aa23.14■■□□□ 1.29
CSNK1E-204ENST00000403904 ZNRF2Q8NHG8 242 aa23.13■■□□□ 1.29
CSNK1E-204ENST00000403904 SMKR1H3BMG3 65 aa23.12■■□□□ 1.29
CSNK1E-204ENST00000403904 MRAP2Q96G30 205 aa23.12■■□□□ 1.29
CSNK1E-204ENST00000403904 NCR2O95944 276 aa23.11■■□□□ 1.29
CSNK1E-204ENST00000403904 SRIP30626 198 aa23.11■■□□□ 1.29
CSNK1E-204ENST00000403904 TCTAP57738 103 aa23.11■■□□□ 1.29
CSNK1E-204ENST00000403904 FRZBQ92765 325 aa23.11■■□□□ 1.29
CSNK1E-204ENST00000403904 RPL39LQ96EH5 51 aaKnown RBP23.11■■□□□ 1.29
CSNK1E-204ENST00000403904 RPL36AP83881 106 aaKnown RBP23.1■■□□□ 1.29
CSNK1E-204ENST00000403904 RPL36ALQ969Q0 106 aaKnown RBP23.1■■□□□ 1.29
CSNK1E-204ENST00000403904 GNB1LQ9BYB4 327 aa23.1■■□□□ 1.29
CSNK1E-204ENST00000403904 LYSTQ99698 3801 aa23.1■■□□□ 1.29
CSNK1E-204ENST00000403904 TRBV7-3A0A075B6L6 115 aa23.1■■□□□ 1.29
CSNK1E-204ENST00000403904 NIT2Q9NQR4 276 aa23.1■■□□□ 1.29
CSNK1E-204ENST00000403904 CKS2P33552 79 aa23.08■■□□□ 1.29
CSNK1E-204ENST00000403904 COX19Q49B96 90 aa23.08■■□□□ 1.29
CSNK1E-204ENST00000403904 HLA-DQA1P01909 254 aa23.07■■□□□ 1.28
CSNK1E-204ENST00000403904 LINC00694P0DN24 101 aa23.07■■□□□ 1.28
CSNK1E-204ENST00000403904 RPS10P46783 165 aaKnown RBP23.07■■□□□ 1.28
CSNK1E-204ENST00000403904 TNFRSF18Q9Y5U5 241 aa23.07■■□□□ 1.28
CSNK1E-204ENST00000403904 D6R8Y8 96 aa23.06■■□□□ 1.28
CSNK1E-204ENST00000403904 NEGR1Q7Z3B1 354 aa23.06■■□□□ 1.28
CSNK1E-204ENST00000403904 DNAJC30Q96LL9 226 aa23.06■■□□□ 1.28
CSNK1E-204ENST00000403904 OR10J3Q5JRS4 329 aa23.05■■□□□ 1.28
CSNK1E-204ENST00000403904 APCSP02743 223 aa23.04■■□□□ 1.28
CSNK1E-204ENST00000403904 UBE2D3P61077 147 aa23.04■■□□□ 1.28
CSNK1E-204ENST00000403904 UBE2D2P62837 147 aa23.04■■□□□ 1.28
CSNK1E-204ENST00000403904 ATP6V0E2Q8NHE4 81 aa23.04■■□□□ 1.28
CSNK1E-204ENST00000403904 MT-ND6P03923 174 aa23.03■■□□□ 1.28
CSNK1E-204ENST00000403904 SH2D6Q7Z4S9 175 aa23.02■■□□□ 1.28
CSNK1E-204ENST00000403904 NRACQ8N912 160 aa23.02■■□□□ 1.28
CSNK1E-204ENST00000403904 MRPL18Q9H0U6 180 aaKnown RBP23.02■■□□□ 1.28
CSNK1E-204ENST00000403904 KIAA1644Q3SXP7 199 aa23.01■■□□□ 1.27
CSNK1E-204ENST00000403904 ORMDL3Q8N138 153 aa23.01■■□□□ 1.27
CSNK1E-204ENST00000403904 COLCA2A8K830 154 aa23.01■■□□□ 1.27
CSNK1E-204ENST00000403904 PPBPP02775 128 aa23.01■■□□□ 1.27
CSNK1E-204ENST00000403904 ESRGQ1W209 222 aa23.01■■□□□ 1.27
CSNK1E-204ENST00000403904 TRAPPC1Q9Y5R8 145 aa23.01■■□□□ 1.27
CSNK1E-204ENST00000403904 IGHV3-38A0A0C4DH36 116 aa23■■□□□ 1.27
CSNK1E-204ENST00000403904 LYPD5Q6UWN5 251 aa22.99■■□□□ 1.27
CSNK1E-204ENST00000403904 FABP9Q0Z7S8 132 aa22.98■■□□□ 1.27
CSNK1E-204ENST00000403904 PRELID3AQ96N28 172 aa22.98■■□□□ 1.27
CSNK1E-204ENST00000403904 TRBV6-5A0A0K0K1A5 114 aa22.97■■□□□ 1.27
CSNK1E-204ENST00000403904 TNFRSF6BO95407 300 aa22.97■■□□□ 1.27
CSNK1E-204ENST00000403904 PPP1R17O96001 155 aa22.97■■□□□ 1.27
CSNK1E-204ENST00000403904 ST20Q9HBF5 79 aa22.97■■□□□ 1.27
CSNK1E-204ENST00000403904 NPYP01303 97 aa22.97■■□□□ 1.27
CSNK1E-204ENST00000403904 GTSF1LQ9H1H1 148 aa22.97■■□□□ 1.27
CSNK1E-204ENST00000403904 SDHAF1A6NFY7 115 aa22.96■■□□□ 1.27
CSNK1E-204ENST00000403904 DAZ4Q86SG3 579 aaKnown RBP22.95■■□□□ 1.26
CSNK1E-204ENST00000403904 DAZ3Q9NR90 486 aaKnown RBP22.95■■□□□ 1.26
CSNK1E-204ENST00000403904 CCL18P55774 89 aa22.94■■□□□ 1.26
CSNK1E-204ENST00000403904 DEFB104AQ8WTQ1 72 aa22.94■■□□□ 1.26
CSNK1E-204ENST00000403904 SREK1IP1Q8N9Q2 155 aaPredicted RBP22.93■■□□□ 1.26
CSNK1E-204ENST00000403904 LINC00588Q9Y4M8 146 aa22.93■■□□□ 1.26
CSNK1E-204ENST00000403904 SUMO2P61956 95 aaKnown RBP22.93■■□□□ 1.26
CSNK1E-204ENST00000403904 TMEM70Q9BUB7 260 aa22.93■■□□□ 1.26
CSNK1E-204ENST00000403904 RAB5AP20339 215 aa22.91■■□□□ 1.26
CSNK1E-204ENST00000403904 POLR2KP53803 58 aaKnown RBP22.91■■□□□ 1.26
CSNK1E-204ENST00000403904 VPS13DQ5THJ4 4388 aa22.91■■□□□ 1.26
CSNK1E-204ENST00000403904 PHOX2AO14813 284 aa22.9■■□□□ 1.26
CSNK1E-204ENST00000403904 C20orf78Q9BR46 151 aa22.9■■□□□ 1.26
CSNK1E-204ENST00000403904 UBE2DNLQ8IWF7 75 aa22.89■■□□□ 1.26
CSNK1E-204ENST00000403904 LAMTOR2Q9Y2Q5 125 aa22.89■■□□□ 1.26
CSNK1E-204ENST00000403904 TIRAPP58753 221 aa22.89■■□□□ 1.25
CSNK1E-204ENST00000403904 ALKBH7Q9BT30 221 aaPredicted RBP22.89■■□□□ 1.25
CSNK1E-204ENST00000403904 PMCHP20382 165 aa22.87■■□□□ 1.25
CSNK1E-204ENST00000403904 NTM-AS1Q6ZSK4 140 aa22.86■■□□□ 1.25
CSNK1E-204ENST00000403904 DNAH1Q9P2D7 4330 aa22.86■■□□□ 1.25
CSNK1E-204ENST00000403904 TRBV27A0A0K0K1C4 114 aa22.85■■□□□ 1.25
CSNK1E-204ENST00000403904 I3L3M4 83 aa22.85■■□□□ 1.25
CSNK1E-204ENST00000403904 LELP1Q5T871 98 aa22.85■■□□□ 1.25
CSNK1E-204ENST00000403904 LGALS9CQ6DKI2 356 aa22.85■■□□□ 1.25
CSNK1E-204ENST00000403904 LOC389332A0A1B0GUA5 103 aa22.84■■□□□ 1.25
CSNK1E-204ENST00000403904 VCYO14598 125 aa22.84■■□□□ 1.25
CSNK1E-204ENST00000403904 TRGC2P03986 189 aa22.84■■□□□ 1.25
CSNK1E-204ENST00000403904 MRPS16Q9Y3D3 137 aaKnown RBP22.84■■□□□ 1.25
CSNK1E-204ENST00000403904 TRBV6-8A0A0A6YYG3 113 aa22.84■■□□□ 1.25
CSNK1E-204ENST00000403904 COTL1Q14019 142 aa22.84■■□□□ 1.25
CSNK1E-204ENST00000403904 SMIM2Q9BVW6 85 aa22.84■■□□□ 1.25
CSNK1E-204ENST00000403904 ALMS1Q8TCU4 4167 aa22.84■■□□□ 1.25
CSNK1E-204ENST00000403904 LINC00476Q8WZB0 136 aa22.83■■□□□ 1.25
CSNK1E-204ENST00000403904 MAP1LC3AQ9H492 121 aa22.83■■□□□ 1.25
CSNK1E-204ENST00000403904 LY6G6CO95867 125 aa22.82■■□□□ 1.24
CSNK1E-204ENST00000403904 RPL32P62910 135 aaKnown RBP22.81■■□□□ 1.24
CSNK1E-204ENST00000403904 TMEM97Q5BJF2 176 aa22.81■■□□□ 1.24
CSNK1E-204ENST00000403904 PRSS47A8MTI9 375 aa22.8■■□□□ 1.24
CSNK1E-204ENST00000403904 TSHBP01222 138 aa22.8■■□□□ 1.24
CSNK1E-204ENST00000403904 WFDC10BQ8IUB3 73 aa22.79■■□□□ 1.24
CSNK1E-204ENST00000403904 KIR2DL4Q99706 377 aa22.79■■□□□ 1.24
CSNK1E-204ENST00000403904 UPK3BQ9BT76 320 aa22.79■■□□□ 1.24
CSNK1E-204ENST00000403904 TRBV25-1A0A075B6N4 114 aa22.77■■□□□ 1.24
CSNK1E-204ENST00000403904 TRAV8-6A0A0B4J262 113 aa22.77■■□□□ 1.24
CSNK1E-204ENST00000403904 IGHV1-24A0A0C4DH33 117 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms