RNA–Protein interactions for RNA: ENST00000400181.8

KDM1A-202, Transcript of lysine demethylase 1A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KDM1A, Length 3,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-202ENST00000400181 SBSPONQ8IVN8 264 aa13.45□□□□□ -0.26
KDM1A-202ENST00000400181 TRAV4A0A0B4J268 109 aa13.44□□□□□ -0.26
KDM1A-202ENST00000400181 TMEM263Q8WUH6 116 aaKnown RBP13.44□□□□□ -0.26
KDM1A-202ENST00000400181 CRYBG3Q68DQ2 2970 aa13.44□□□□□ -0.26
KDM1A-202ENST00000400181 TMEM262E9PQX1 116 aa13.43□□□□□ -0.26
KDM1A-202ENST00000400181 CEMP1Q6PRD7 247 aaPredicted RBP13.43□□□□□ -0.26
KDM1A-202ENST00000400181 TMEM223A0PJW6 202 aa13.43□□□□□ -0.26
KDM1A-202ENST00000400181 SNCGO76070 127 aa13.43□□□□□ -0.26
KDM1A-202ENST00000400181 ZNF22P17026 224 aaPredicted RBP13.43□□□□□ -0.26
KDM1A-202ENST00000400181 Q8N1Y9 231 aa13.43□□□□□ -0.26
KDM1A-202ENST00000400181 VCX2Q9H322 139 aa13.43□□□□□ -0.26
KDM1A-202ENST00000400181 CHD8Q9HCK8 2581 aa13.43□□□□□ -0.26
KDM1A-202ENST00000400181 TRAV8-3A0A0A6YYJ7 113 aa13.43□□□□□ -0.26
KDM1A-202ENST00000400181 TRBV27A0A0K0K1C4 114 aa13.43□□□□□ -0.26
KDM1A-202ENST00000400181 P0DMU3 169 aa13.43□□□□□ -0.26
KDM1A-202ENST00000400181 FAM231AP0DMU4 169 aa13.43□□□□□ -0.26
KDM1A-202ENST00000400181 FAM231CP0DMU5 169 aa13.43□□□□□ -0.26
KDM1A-202ENST00000400181 Q6ZSV7 163 aa13.43□□□□□ -0.26
KDM1A-202ENST00000400181 LEPROTO15243 131 aa13.42□□□□□ -0.26
KDM1A-202ENST00000400181 NXPH4O95158 308 aa13.42□□□□□ -0.26
KDM1A-202ENST00000400181 GAGE2BQ13066 116 aa13.42□□□□□ -0.26
KDM1A-202ENST00000400181 GAGE2EQ4V326 116 aa13.42□□□□□ -0.26
KDM1A-202ENST00000400181 GAGE2DQ9UEU5 116 aa13.42□□□□□ -0.26
KDM1A-202ENST00000400181 KLLNB2CW77 178 aa13.42□□□□□ -0.26
KDM1A-202ENST00000400181 SPINK13Q1W4C9 94 aa13.42□□□□□ -0.26
KDM1A-202ENST00000400181 TMEM95Q3KNT9 176 aa13.42□□□□□ -0.26
KDM1A-202ENST00000400181 H3BUX3 64 aa13.41□□□□□ -0.26
KDM1A-202ENST00000400181 RHODO00212 210 aa13.41□□□□□ -0.26
KDM1A-202ENST00000400181 DAZ1Q9NQZ3 744 aaKnown RBP13.41□□□□□ -0.26
KDM1A-202ENST00000400181 A8MZ25 164 aa13.41□□□□□ -0.26
KDM1A-202ENST00000400181 M0QY20 66 aa13.41□□□□□ -0.26
KDM1A-202ENST00000400181 LINC01620Q4KN68 170 aa13.41□□□□□ -0.26
KDM1A-202ENST00000400181 POM121L12Q8N7R1 296 aa13.41□□□□□ -0.26
KDM1A-202ENST00000400181 CUBNO60494 3623 aa13.4□□□□□ -0.26
KDM1A-202ENST00000400181 IGHV4-38-2P0DP08 117 aa13.4□□□□□ -0.26
KDM1A-202ENST00000400181 C19orf54Q5BKX5 351 aa13.4□□□□□ -0.26
KDM1A-202ENST00000400181 APRG1Q8IVJ8 170 aa13.4□□□□□ -0.26
KDM1A-202ENST00000400181 TRIAP1O43715 76 aa13.39□□□□□ -0.27
KDM1A-202ENST00000400181 C2CD3Q4AC94 2353 aa13.39□□□□□ -0.27
KDM1A-202ENST00000400181 A0A0J9YXY3 114 aa13.39□□□□□ -0.27
KDM1A-202ENST00000400181 LGALS9O00182 355 aa13.39□□□□□ -0.27
KDM1A-202ENST00000400181 ATXN8Q156A1 80 aa13.39□□□□□ -0.27
KDM1A-202ENST00000400181 IGHV3-16A0A0C4DH30 117 aa13.38□□□□□ -0.27
KDM1A-202ENST00000400181 ID1P41134 155 aa13.38□□□□□ -0.27
KDM1A-202ENST00000400181 RPL32P62910 135 aaKnown RBP13.38□□□□□ -0.27
KDM1A-202ENST00000400181 C20orf203Q8NBC4 194 aa13.38□□□□□ -0.27
KDM1A-202ENST00000400181 CD28P10747 220 aa13.38□□□□□ -0.27
KDM1A-202ENST00000400181 IGLV4-3A0A075B6K6 122 aa13.37□□□□□ -0.27
KDM1A-202ENST00000400181 IGHV3-30-3P0DP02 117 aa13.37□□□□□ -0.27
KDM1A-202ENST00000400181 PROK1P58294 105 aa13.37□□□□□ -0.27
KDM1A-202ENST00000400181 TTC32Q5I0X7 151 aa13.37□□□□□ -0.27
KDM1A-202ENST00000400181 CITED1Q99966 193 aa13.37□□□□□ -0.27
KDM1A-202ENST00000400181 IGHV1-69P01742 117 aa13.37□□□□□ -0.27
KDM1A-202ENST00000400181 PRM2P04554 102 aa13.37□□□□□ -0.27
KDM1A-202ENST00000400181 NHLRC4P0CG21 123 aaPredicted RBP13.37□□□□□ -0.27
KDM1A-202ENST00000400181 GAGE5Q13069 117 aa13.37□□□□□ -0.27
KDM1A-202ENST00000400181 GAGE6Q13070 117 aa13.37□□□□□ -0.27
KDM1A-202ENST00000400181 TRAV8-4A0A0B4J246 113 aa13.36□□□□□ -0.27
KDM1A-202ENST00000400181 KNCNA6PVL3 124 aa13.36□□□□□ -0.27
KDM1A-202ENST00000400181 USMG5Q96IX5 58 aa13.36□□□□□ -0.27
KDM1A-202ENST00000400181 A0A0B4J2C4 111 aa13.36□□□□□ -0.27
KDM1A-202ENST00000400181 DCANP1Q8TF63 244 aa13.36□□□□□ -0.27
KDM1A-202ENST00000400181 TIMM21Q9BVV7 248 aa13.36□□□□□ -0.27
KDM1A-202ENST00000400181 C2orf82Q6UX34 121 aa13.36□□□□□ -0.27
KDM1A-202ENST00000400181 DAND5Q8N907 189 aa13.36□□□□□ -0.27
KDM1A-202ENST00000400181 CLEC2BQ92478 149 aa13.36□□□□□ -0.27
KDM1A-202ENST00000400181 DUX5Q96PT3 197 aa13.36□□□□□ -0.27
KDM1A-202ENST00000400181 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.35□□□□□ -0.27
KDM1A-202ENST00000400181 TRBV6-5A0A0K0K1A5 114 aa13.35□□□□□ -0.27
KDM1A-202ENST00000400181 ADAMTSL4-AS1Q5T5F5 129 aa13.35□□□□□ -0.27
KDM1A-202ENST00000400181 C10orf99Q6UWK7 81 aa13.35□□□□□ -0.27
KDM1A-202ENST00000400181 C15orf53Q8NAA6 179 aa13.35□□□□□ -0.27
KDM1A-202ENST00000400181 SPTBN4Q9H254 2564 aa13.35□□□□□ -0.27
KDM1A-202ENST00000400181 SVIPQ8NHG7 77 aa13.35□□□□□ -0.27
KDM1A-202ENST00000400181 CCDC179H3BU77 68 aa13.34□□□□□ -0.27
KDM1A-202ENST00000400181 I3L3M4 83 aa13.34□□□□□ -0.27
KDM1A-202ENST00000400181 NDUFV3P56181 108 aaKnown RBP13.34□□□□□ -0.27
KDM1A-202ENST00000400181 NSUN5P1Q3KNT7 163 aa13.34□□□□□ -0.27
KDM1A-202ENST00000400181 M0R2P5 195 aa13.33□□□□□ -0.27
KDM1A-202ENST00000400181 C9orf85Q96MD7 179 aa13.33□□□□□ -0.27
KDM1A-202ENST00000400181 Q9UF83 564 aa13.33□□□□□ -0.27
KDM1A-202ENST00000400181 H3BMM0 161 aa13.33□□□□□ -0.28
KDM1A-202ENST00000400181 RHOHQ15669 191 aa13.33□□□□□ -0.28
KDM1A-202ENST00000400181 UBE2WQ96B02 151 aa13.33□□□□□ -0.28
KDM1A-202ENST00000400181 IGHV1OR15-1A0A075B7D0 117 aa13.32□□□□□ -0.28
KDM1A-202ENST00000400181 TRBV7-9A0A0J9YWB2 115 aa13.32□□□□□ -0.28
KDM1A-202ENST00000400181 IGHG2P01859 326 aa13.32□□□□□ -0.28
KDM1A-202ENST00000400181 USP9YO00507 2555 aaPredicted RBP13.32□□□□□ -0.28
KDM1A-202ENST00000400181 A0A0U1RRA0 63 aa13.32□□□□□ -0.28
KDM1A-202ENST00000400181 DUX3Q96PT4 197 aa13.32□□□□□ -0.28
KDM1A-202ENST00000400181 NDUFA12Q9UI09 145 aa13.32□□□□□ -0.28
KDM1A-202ENST00000400181 ODF3Q96PU9 254 aa13.31□□□□□ -0.28
KDM1A-202ENST00000400181 CELSR2Q9HCU4 2923 aa13.31□□□□□ -0.28
KDM1A-202ENST00000400181 IGHV4-61A0A0C4DH41 118 aa13.31□□□□□ -0.28
KDM1A-202ENST00000400181 TRBV10-2A0A0K0K1G8 114 aa13.31□□□□□ -0.28
KDM1A-202ENST00000400181 ICOSQ9Y6W8 199 aa13.31□□□□□ -0.28
KDM1A-202ENST00000400181 IFITM1P13164 125 aa13.31□□□□□ -0.28
KDM1A-202ENST00000400181 KLRB1Q12918 225 aa13.3□□□□□ -0.28
KDM1A-202ENST00000400181 IGHV3-38A0A0C4DH36 116 aa13.29□□□□□ -0.28
KDM1A-202ENST00000400181 A0A0J9YX75 114 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms