RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 F8WEM9 126 aa4.36□□□□□ -1.71
PTPRD-206ENST00000397617 NDUFC2O95298 119 aa4.36□□□□□ -1.71
PTPRD-206ENST00000397617 KIAA1644Q3SXP7 199 aa4.36□□□□□ -1.71
PTPRD-206ENST00000397617 NFE4Q86UQ8 179 aa4.36□□□□□ -1.71
PTPRD-206ENST00000397617 ARL17AQ8IVW1 177 aa4.36□□□□□ -1.71
PTPRD-206ENST00000397617 H3BVH4 76 aa4.36□□□□□ -1.71
PTPRD-206ENST00000397617 RCHY1Q96PM5 261 aa4.36□□□□□ -1.71
PTPRD-206ENST00000397617 IGHV3-16A0A0C4DH30 117 aa4.36□□□□□ -1.71
PTPRD-206ENST00000397617 Q8TAT8 98 aa4.36□□□□□ -1.71
PTPRD-206ENST00000397617 DNAJC9-AS1A6NH13 148 aa4.35□□□□□ -1.71
PTPRD-206ENST00000397617 PRAC2D3DTV9 90 aa4.35□□□□□ -1.71
PTPRD-206ENST00000397617 M0R2P5 195 aa4.35□□□□□ -1.71
PTPRD-206ENST00000397617 TIRAPP58753 221 aa4.35□□□□□ -1.71
PTPRD-206ENST00000397617 UBE2V1Q13404 147 aa4.35□□□□□ -1.71
PTPRD-206ENST00000397617 ODF1Q14990 250 aa4.35□□□□□ -1.71
PTPRD-206ENST00000397617 LY6EQ16553 131 aa4.35□□□□□ -1.71
PTPRD-206ENST00000397617 C14orf144Q96I85 54 aa4.35□□□□□ -1.71
PTPRD-206ENST00000397617 SMAD7O15105 426 aaKnown RBP4.35□□□□□ -1.71
PTPRD-206ENST00000397617 LINC01006Q8NI28 216 aa4.35□□□□□ -1.71
PTPRD-206ENST00000397617 ANAPC13Q9BS18 74 aa4.35□□□□□ -1.71
PTPRD-206ENST00000397617 RNF224P0DH78 156 aa4.35□□□□□ -1.71
PTPRD-206ENST00000397617 TMEM263Q8WUH6 116 aaKnown RBP4.35□□□□□ -1.71
PTPRD-206ENST00000397617 SVIPQ8NHG7 77 aa4.35□□□□□ -1.71
PTPRD-206ENST00000397617 TM2D2Q9BX73 214 aa4.35□□□□□ -1.71
PTPRD-206ENST00000397617 A1L4Q6 167 aa4.35□□□□□ -1.71
PTPRD-206ENST00000397617 CRLF1O75462 422 aa4.35□□□□□ -1.71
PTPRD-206ENST00000397617 MALP21145 153 aa4.35□□□□□ -1.71
PTPRD-206ENST00000397617 SYNJ2BPP57105 145 aa4.35□□□□□ -1.71
PTPRD-206ENST00000397617 EREGO14944 169 aa4.35□□□□□ -1.71
PTPRD-206ENST00000397617 NPYP01303 97 aa4.35□□□□□ -1.71
PTPRD-206ENST00000397617 IFI27P40305 119 aaPredicted RBP4.35□□□□□ -1.71
PTPRD-206ENST00000397617 TOMM6Q96B49 74 aa4.35□□□□□ -1.71
PTPRD-206ENST00000397617 CHCHD7Q9BUK0 85 aa4.35□□□□□ -1.71
PTPRD-206ENST00000397617 TRGV2A0A075B6R0 118 aa4.34□□□□□ -1.71
PTPRD-206ENST00000397617 ACYP1P07311 99 aa4.34□□□□□ -1.71
PTPRD-206ENST00000397617 C20orf203Q8NBC4 194 aa4.34□□□□□ -1.71
PTPRD-206ENST00000397617 C11orf21Q9P2W6 132 aa4.34□□□□□ -1.71
PTPRD-206ENST00000397617 CELSR3Q9NYQ7 3312 aa4.34□□□□□ -1.71
PTPRD-206ENST00000397617 A0A087WX48 190 aa4.34□□□□□ -1.71
PTPRD-206ENST00000397617 C2orf66Q6UXQ4 117 aa4.34□□□□□ -1.71
PTPRD-206ENST00000397617 SMIM20Q8N5G0 67 aa4.34□□□□□ -1.71
PTPRD-206ENST00000397617 A8MZ25 164 aa4.34□□□□□ -1.71
PTPRD-206ENST00000397617 CCL24O00175 119 aa4.34□□□□□ -1.71
PTPRD-206ENST00000397617 IGHV3-11P01762 117 aa4.34□□□□□ -1.71
PTPRD-206ENST00000397617 CRYGDP07320 174 aa4.34□□□□□ -1.71
PTPRD-206ENST00000397617 F8W1H4 67 aa4.34□□□□□ -1.72
PTPRD-206ENST00000397617 NUPR1O60356 82 aa4.34□□□□□ -1.72
PTPRD-206ENST00000397617 FAM19A3Q7Z5A8 133 aa4.34□□□□□ -1.72
PTPRD-206ENST00000397617 LINC00612Q8N6U2 182 aa4.34□□□□□ -1.72
PTPRD-206ENST00000397617 M0QY20 66 aa4.34□□□□□ -1.72
PTPRD-206ENST00000397617 NEGR1Q7Z3B1 354 aa4.34□□□□□ -1.72
PTPRD-206ENST00000397617 LINC01561Q8N1V8 128 aa4.34□□□□□ -1.72
PTPRD-206ENST00000397617 RNF182Q8N6D2 247 aa4.34□□□□□ -1.72
PTPRD-206ENST00000397617 PGPEP1Q9NXJ5 209 aa4.34□□□□□ -1.72
PTPRD-206ENST00000397617 SPEGQ15772 3267 aa4.33□□□□□ -1.72
PTPRD-206ENST00000397617 SDHAF1A6NFY7 115 aa4.33□□□□□ -1.72
PTPRD-206ENST00000397617 H3BTX0 84 aa4.33□□□□□ -1.72
PTPRD-206ENST00000397617 CKS1BP61024 79 aa4.33□□□□□ -1.72
PTPRD-206ENST00000397617 WFDC11Q8NEX6 87 aa4.33□□□□□ -1.72
PTPRD-206ENST00000397617 RMI2Q96E14 147 aa4.33□□□□□ -1.72
PTPRD-206ENST00000397617 TIMM17BO60830 172 aa4.33□□□□□ -1.72
PTPRD-206ENST00000397617 TRBV6-4A0A1B0GX49 114 aa4.33□□□□□ -1.72
PTPRD-206ENST00000397617 KLHL30-AS1Q8NEE0 82 aa4.33□□□□□ -1.72
PTPRD-206ENST00000397617 APOMO95445 188 aa4.33□□□□□ -1.72
PTPRD-206ENST00000397617 ODF3L2Q3SX64 289 aa4.33□□□□□ -1.72
PTPRD-206ENST00000397617 ZNF876PQ49A33 203 aa4.33□□□□□ -1.72
PTPRD-206ENST00000397617 DAZ4Q86SG3 579 aaKnown RBP4.33□□□□□ -1.72
PTPRD-206ENST00000397617 DAZ3Q9NR90 486 aaKnown RBP4.33□□□□□ -1.72
PTPRD-206ENST00000397617 MRPL16Q9NX20 251 aaKnown RBP4.33□□□□□ -1.72
PTPRD-206ENST00000397617 TSPAN13O95857 204 aa4.33□□□□□ -1.72
PTPRD-206ENST00000397617 IFITM1P13164 125 aa4.33□□□□□ -1.72
PTPRD-206ENST00000397617 IGLL1P15814 213 aa4.33□□□□□ -1.72
PTPRD-206ENST00000397617 MYO15AQ9UKN7 3530 aa4.33□□□□□ -1.72
PTPRD-206ENST00000397617 LCNL1Q6ZST4 164 aa4.33□□□□□ -1.72
PTPRD-206ENST00000397617 TP53TG1Q9Y2A0 90 aa4.33□□□□□ -1.72
PTPRD-206ENST00000397617 E9PLD3 99 aa4.32□□□□□ -1.72
PTPRD-206ENST00000397617 WFDC3Q8IUB2 231 aa4.32□□□□□ -1.72
PTPRD-206ENST00000397617 PLEKHB2Q96CS7 222 aa4.32□□□□□ -1.72
PTPRD-206ENST00000397617 C8orf49Q96NF6 230 aa4.32□□□□□ -1.72
PTPRD-206ENST00000397617 HHLA3Q9XRX5 114 aa4.32□□□□□ -1.72
PTPRD-206ENST00000397617 IGKV3-7A0A075B6H7 116 aa4.32□□□□□ -1.72
PTPRD-206ENST00000397617 I3L3M4 83 aa4.32□□□□□ -1.72
PTPRD-206ENST00000397617 SPINK4O60575 86 aa4.32□□□□□ -1.72
PTPRD-206ENST00000397617 ERCC8Q13216 396 aa4.32□□□□□ -1.72
PTPRD-206ENST00000397617 MDFICQ9P1T7 246 aa4.32□□□□□ -1.72
PTPRD-206ENST00000397617 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.32□□□□□ -1.72
PTPRD-206ENST00000397617 TRBV12-3P01733 135 aa4.32□□□□□ -1.72
PTPRD-206ENST00000397617 ATP5EP56381 51 aaPredicted RBP4.32□□□□□ -1.72
PTPRD-206ENST00000397617 MAP6D1Q9H9H5 199 aa4.32□□□□□ -1.72
PTPRD-206ENST00000397617 IGLV5-45A0A087WSX0 123 aa4.32□□□□□ -1.72
PTPRD-206ENST00000397617 SAP30O75446 220 aa4.32□□□□□ -1.72
PTPRD-206ENST00000397617 GAGE2BQ13066 116 aa4.32□□□□□ -1.72
PTPRD-206ENST00000397617 GAGE2EQ4V326 116 aa4.32□□□□□ -1.72
PTPRD-206ENST00000397617 DUX3Q96PT4 197 aa4.32□□□□□ -1.72
PTPRD-206ENST00000397617 PRADC1Q9BSG0 188 aa4.32□□□□□ -1.72
PTPRD-206ENST00000397617 GAGE2DQ9UEU5 116 aa4.32□□□□□ -1.72
PTPRD-206ENST00000397617 PAM16Q9Y3D7 125 aa4.32□□□□□ -1.72
PTPRD-206ENST00000397617 CD7P09564 240 aa4.32□□□□□ -1.72
PTPRD-206ENST00000397617 IL17DQ8TAD2 202 aa4.32□□□□□ -1.72
PTPRD-206ENST00000397617 C16orf74Q96GX8 76 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms