RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 K7EP13 123 aa17.26■□□□□ 0.35
TSPAN4-207ENST00000397411 BTF3P20290 206 aaKnown RBP17.26■□□□□ 0.35
TSPAN4-207ENST00000397411 A0A1B0GUT8 65 aa17.25■□□□□ 0.35
TSPAN4-207ENST00000397411 IGHV3-30P01768 117 aa17.25■□□□□ 0.35
TSPAN4-207ENST00000397411 IGHV3-33P01772 117 aa17.25■□□□□ 0.35
TSPAN4-207ENST00000397411 IGHV3-30-3P0DP02 117 aa17.25■□□□□ 0.35
TSPAN4-207ENST00000397411 IGHV3-30-5P0DP03 117 aa17.25■□□□□ 0.35
TSPAN4-207ENST00000397411 C10orf126Q8N4M7 172 aa17.25■□□□□ 0.35
TSPAN4-207ENST00000397411 DNAJC30Q96LL9 226 aa17.25■□□□□ 0.35
TSPAN4-207ENST00000397411 M0QY20 66 aa17.24■□□□□ 0.35
TSPAN4-207ENST00000397411 RASL11AQ6T310 242 aa17.24■□□□□ 0.35
TSPAN4-207ENST00000397411 RIGQ13278 110 aa17.23■□□□□ 0.35
TSPAN4-207ENST00000397411 LINC01556Q5JQF7 62 aa17.23■□□□□ 0.35
TSPAN4-207ENST00000397411 UQCC3Q6UW78 93 aa17.23■□□□□ 0.35
TSPAN4-207ENST00000397411 NAT8BQ9UHF3 227 aa17.23■□□□□ 0.35
TSPAN4-207ENST00000397411 URGCP-MRPS24S4R325 110 aa17.22■□□□□ 0.35
TSPAN4-207ENST00000397411 DNAH10Q8IVF4 4471 aa17.21■□□□□ 0.35
TSPAN4-207ENST00000397411 KCNIP4Q6PIL6 250 aa17.21■□□□□ 0.35
TSPAN4-207ENST00000397411 DAZ4Q86SG3 579 aaKnown RBP17.21■□□□□ 0.35
TSPAN4-207ENST00000397411 NFE4Q86UQ8 179 aa17.21■□□□□ 0.35
TSPAN4-207ENST00000397411 NUP35Q8NFH5 326 aa17.21■□□□□ 0.35
TSPAN4-207ENST00000397411 DAZ3Q9NR90 486 aaKnown RBP17.21■□□□□ 0.35
TSPAN4-207ENST00000397411 TMEM97Q5BJF2 176 aa17.2■□□□□ 0.34
TSPAN4-207ENST00000397411 NIT2Q9NQR4 276 aa17.2■□□□□ 0.34
TSPAN4-207ENST00000397411 PNRC1Q12796 327 aaPredicted RBP17.19■□□□□ 0.34
TSPAN4-207ENST00000397411 TMEM262E9PQX1 116 aa17.18■□□□□ 0.34
TSPAN4-207ENST00000397411 TRBV6-8A0A0A6YYG3 113 aa17.17■□□□□ 0.34
TSPAN4-207ENST00000397411 SMIM27A0A1W2PRY6 76 aa17.17■□□□□ 0.34
TSPAN4-207ENST00000397411 PPP1R2P9O14990 202 aa17.17■□□□□ 0.34
TSPAN4-207ENST00000397411 TNP2Q05952 138 aa17.17■□□□□ 0.34
TSPAN4-207ENST00000397411 GATD1Q8NB37 220 aa17.17■□□□□ 0.34
TSPAN4-207ENST00000397411 A0A087WX48 190 aa17.16■□□□□ 0.34
TSPAN4-207ENST00000397411 TRAV26-2A0A0B4J265 109 aa17.16■□□□□ 0.34
TSPAN4-207ENST00000397411 CHCHD5Q9BSY4 110 aa17.15■□□□□ 0.34
TSPAN4-207ENST00000397411 TMEM191AQ9H0A3 160 aa17.15■□□□□ 0.34
TSPAN4-207ENST00000397411 IBA57-AS1B1ANH7 110 aa17.14■□□□□ 0.33
TSPAN4-207ENST00000397411 MT-ND4LP03901 98 aa17.14■□□□□ 0.33
TSPAN4-207ENST00000397411 COMMD7Q86VX2 200 aa17.14■□□□□ 0.33
TSPAN4-207ENST00000397411 NIT1Q86X76 327 aa17.14■□□□□ 0.33
TSPAN4-207ENST00000397411 FRZBQ92765 325 aa17.14■□□□□ 0.33
TSPAN4-207ENST00000397411 Q9HAA7 133 aa17.13■□□□□ 0.33
TSPAN4-207ENST00000397411 TRBV25-1A0A075B6N4 114 aa17.12■□□□□ 0.33
TSPAN4-207ENST00000397411 F8W036 122 aa17.12■□□□□ 0.33
TSPAN4-207ENST00000397411 Q8N3U1 123 aa17.12■□□□□ 0.33
TSPAN4-207ENST00000397411 TMEM218A2RU14 115 aa17.11■□□□□ 0.33
TSPAN4-207ENST00000397411 CAMPP49913 170 aa17.11■□□□□ 0.33
TSPAN4-207ENST00000397411 ANAPC16Q96DE5 110 aa17.11■□□□□ 0.33
TSPAN4-207ENST00000397411 DNAH2Q9P225 4427 aa17.1■□□□□ 0.33
TSPAN4-207ENST00000397411 IGHV1-24A0A0C4DH33 117 aa17.1■□□□□ 0.33
TSPAN4-207ENST00000397411 A0A1B0GVY2 172 aa17.1■□□□□ 0.33
TSPAN4-207ENST00000397411 A0A1B0GW15 77 aa17.1■□□□□ 0.33
TSPAN4-207ENST00000397411 PSCAO43653 123 aa17.1■□□□□ 0.33
TSPAN4-207ENST00000397411 PKIAP61925 76 aa17.1■□□□□ 0.33
TSPAN4-207ENST00000397411 ELOBQ15370 118 aa17.1■□□□□ 0.33
TSPAN4-207ENST00000397411 RPL39LQ96EH5 51 aaKnown RBP17.1■□□□□ 0.33
TSPAN4-207ENST00000397411 EPPK1P58107 5090 aaKnown RBP17.09■□□□□ 0.33
TSPAN4-207ENST00000397411 LINC00862A6NCI5 91 aa17.09■□□□□ 0.33
TSPAN4-207ENST00000397411 RAB4AP20338 218 aa17.09■□□□□ 0.33
TSPAN4-207ENST00000397411 NTM-AS1Q6ZSK4 140 aa17.09■□□□□ 0.33
TSPAN4-207ENST00000397411 AMN1Q8IY45 258 aa17.09■□□□□ 0.33
TSPAN4-207ENST00000397411 CHCHD7Q9BUK0 85 aa17.09■□□□□ 0.33
TSPAN4-207ENST00000397411 FRAS1Q86XX4 4008 aa17.08■□□□□ 0.33
TSPAN4-207ENST00000397411 EREGO14944 169 aa17.08■□□□□ 0.32
TSPAN4-207ENST00000397411 S100A8P05109 93 aa17.08■□□□□ 0.32
TSPAN4-207ENST00000397411 COTL1Q14019 142 aa17.08■□□□□ 0.32
TSPAN4-207ENST00000397411 MRPL54Q6P161 138 aaKnown RBP17.08■□□□□ 0.32
TSPAN4-207ENST00000397411 Q6ZRN7 208 aaPredicted RBP17.08■□□□□ 0.32
TSPAN4-207ENST00000397411 GAGE6Q13070 117 aa17.07■□□□□ 0.32
TSPAN4-207ENST00000397411 LAGE3Q14657 143 aa17.07■□□□□ 0.32
TSPAN4-207ENST00000397411 DEFB104AQ8WTQ1 72 aa17.07■□□□□ 0.32
TSPAN4-207ENST00000397411 MRAP2Q96G30 205 aa17.07■□□□□ 0.32
TSPAN4-207ENST00000397411 KLK12Q9UKR0 248 aa17.07■□□□□ 0.32
TSPAN4-207ENST00000397411 DNAH17Q9UFH2 4485 aa17.06■□□□□ 0.32
TSPAN4-207ENST00000397411 TRAV8-3A0A0A6YYJ7 113 aa17.06■□□□□ 0.32
TSPAN4-207ENST00000397411 RNF185Q96GF1 192 aa17.06■□□□□ 0.32
TSPAN4-207ENST00000397411 IQCJQ1A5X6 159 aa17.05■□□□□ 0.32
TSPAN4-207ENST00000397411 TMEM243Q9BU79 118 aa17.05■□□□□ 0.32
TSPAN4-207ENST00000397411 TM2D2Q9BX73 214 aa17.05■□□□□ 0.32
TSPAN4-207ENST00000397411 SEC11CQ9BY50 192 aa17.05■□□□□ 0.32
TSPAN4-207ENST00000397411 ST20Q9HBF5 79 aa17.05■□□□□ 0.32
TSPAN4-207ENST00000397411 PMCHP20382 165 aa17.04■□□□□ 0.32
TSPAN4-207ENST00000397411 AMTP48728 403 aa17.04■□□□□ 0.32
TSPAN4-207ENST00000397411 HBBP68871 147 aa17.04■□□□□ 0.32
TSPAN4-207ENST00000397411 SDHAF1A6NFY7 115 aa17.03■□□□□ 0.32
TSPAN4-207ENST00000397411 UBE2L6O14933 153 aa17.03■□□□□ 0.32
TSPAN4-207ENST00000397411 ATRAIDQ6UW56 229 aa17.03■□□□□ 0.32
TSPAN4-207ENST00000397411 UBE2WQ96B02 151 aa17.03■□□□□ 0.32
TSPAN4-207ENST00000397411 PPP1R17O96001 155 aa17.02■□□□□ 0.32
TSPAN4-207ENST00000397411 ANGP03950 147 aaKnown RBP17.02■□□□□ 0.32
TSPAN4-207ENST00000397411 ADCYAP1P18509 176 aa17.02■□□□□ 0.32
TSPAN4-207ENST00000397411 MPV17L2Q567V2 206 aa17.02■□□□□ 0.32
TSPAN4-207ENST00000397411 FAM104BQ5XKR9 115 aa17.02■□□□□ 0.32
TSPAN4-207ENST00000397411 RMI2Q96E14 147 aa17.02■□□□□ 0.32
TSPAN4-207ENST00000397411 TRBV6-5A0A0K0K1A5 114 aa17.01■□□□□ 0.31
TSPAN4-207ENST00000397411 SMKR1H3BMG3 65 aa17.01■□□□□ 0.31
TSPAN4-207ENST00000397411 I3L3M4 83 aa17■□□□□ 0.31
TSPAN4-207ENST00000397411 GAS8-AS1O95177 125 aa17■□□□□ 0.31
TSPAN4-207ENST00000397411 NCR2O95944 276 aa17■□□□□ 0.31
TSPAN4-207ENST00000397411 CRPP02741 224 aa17■□□□□ 0.31
TSPAN4-207ENST00000397411 MRPL51Q4U2R6 128 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms