RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 H3BUA1 57 aa10.98□□□□□ -0.65
CCNF-202ENST00000397066 RHODO00212 210 aa10.98□□□□□ -0.65
CCNF-202ENST00000397066 RHOHQ15669 191 aa10.98□□□□□ -0.65
CCNF-202ENST00000397066 DUX5Q96PT3 197 aa10.98□□□□□ -0.65
CCNF-202ENST00000397066 DOPEY2Q9Y3R5 2298 aa10.98□□□□□ -0.65
CCNF-202ENST00000397066 COX6CP09669 75 aa10.98□□□□□ -0.65
CCNF-202ENST00000397066 GAGE2BQ13066 116 aa10.98□□□□□ -0.65
CCNF-202ENST00000397066 GAGE2EQ4V326 116 aa10.98□□□□□ -0.65
CCNF-202ENST00000397066 GAGE2DQ9UEU5 116 aa10.98□□□□□ -0.65
CCNF-202ENST00000397066 TNFRSF18Q9Y5U5 241 aa10.98□□□□□ -0.65
CCNF-202ENST00000397066 SVEP1Q4LDE5 3571 aa10.97□□□□□ -0.65
CCNF-202ENST00000397066 LGALS9O00182 355 aa10.97□□□□□ -0.65
CCNF-202ENST00000397066 TTC32Q5I0X7 151 aa10.97□□□□□ -0.65
CCNF-202ENST00000397066 FAM19A4Q96LR4 140 aa10.97□□□□□ -0.65
CCNF-202ENST00000397066 IGHV3-16A0A0C4DH30 117 aa10.97□□□□□ -0.65
CCNF-202ENST00000397066 IGHV4-61A0A0C4DH41 118 aa10.97□□□□□ -0.65
CCNF-202ENST00000397066 NXPH4O95158 308 aa10.97□□□□□ -0.65
CCNF-202ENST00000397066 CRIP2P52943 208 aaPredicted RBP10.97□□□□□ -0.65
CCNF-202ENST00000397066 FHL3Q13643 280 aa10.97□□□□□ -0.65
CCNF-202ENST00000397066 RNF183Q96D59 192 aa10.97□□□□□ -0.65
CCNF-202ENST00000397066 HIVEP3Q5T1R4 2406 aa10.97□□□□□ -0.65
CCNF-202ENST00000397066 TMEM223A0PJW6 202 aa10.97□□□□□ -0.65
CCNF-202ENST00000397066 M0QY20 66 aa10.97□□□□□ -0.65
CCNF-202ENST00000397066 M0R2P5 195 aa10.96□□□□□ -0.65
CCNF-202ENST00000397066 IGHV3-33P01772 117 aa10.96□□□□□ -0.65
CCNF-202ENST00000397066 C20orf203Q8NBC4 194 aa10.96□□□□□ -0.65
CCNF-202ENST00000397066 MUC4Q99102 2169 aa10.96□□□□□ -0.65
CCNF-202ENST00000397066 ZNF22P17026 224 aaPredicted RBP10.96□□□□□ -0.65
CCNF-202ENST00000397066 KNCNA6PVL3 124 aa10.96□□□□□ -0.66
CCNF-202ENST00000397066 TRAV8-4A0A0B4J246 113 aa10.95□□□□□ -0.66
CCNF-202ENST00000397066 ATP5J2P56134 94 aa10.95□□□□□ -0.66
CCNF-202ENST00000397066 SYNJ2BPP57105 145 aa10.95□□□□□ -0.66
CCNF-202ENST00000397066 CEMP1Q6PRD7 247 aaPredicted RBP10.95□□□□□ -0.66
CCNF-202ENST00000397066 C2orf82Q6UX34 121 aa10.95□□□□□ -0.66
CCNF-202ENST00000397066 APRG1Q8IVJ8 170 aa10.95□□□□□ -0.66
CCNF-202ENST00000397066 CCL19Q99731 98 aa10.95□□□□□ -0.66
CCNF-202ENST00000397066 TRBV6-5A0A0K0K1A5 114 aa10.94□□□□□ -0.66
CCNF-202ENST00000397066 LINC01620Q4KN68 170 aa10.94□□□□□ -0.66
CCNF-202ENST00000397066 C19orf54Q5BKX5 351 aa10.94□□□□□ -0.66
CCNF-202ENST00000397066 ZNF580Q9UK33 172 aa10.94□□□□□ -0.66
CCNF-202ENST00000397066 HRNRQ86YZ3 2850 aaPredicted RBP10.94□□□□□ -0.66
CCNF-202ENST00000397066 TRGV11A0A075B6L2 103 aa10.94□□□□□ -0.66
CCNF-202ENST00000397066 TRAV8-3A0A0A6YYJ7 113 aa10.94□□□□□ -0.66
CCNF-202ENST00000397066 DGAT2L7PQ6IED9 249 aa10.94□□□□□ -0.66
CCNF-202ENST00000397066 MAP1AP78559 2803 aaPredicted RBP10.94□□□□□ -0.66
CCNF-202ENST00000397066 NSUN5P1Q3KNT7 163 aa10.93□□□□□ -0.66
CCNF-202ENST00000397066 POM121L12Q8N7R1 296 aa10.93□□□□□ -0.66
CCNF-202ENST00000397066 DCANP1Q8TF63 244 aa10.93□□□□□ -0.66
CCNF-202ENST00000397066 TMEM263Q8WUH6 116 aaKnown RBP10.93□□□□□ -0.66
CCNF-202ENST00000397066 NDUFA12Q9UI09 145 aa10.93□□□□□ -0.66
CCNF-202ENST00000397066 IGHV3-30-3P0DP02 117 aa10.93□□□□□ -0.66
CCNF-202ENST00000397066 A0A0J9YXY3 114 aa10.93□□□□□ -0.66
CCNF-202ENST00000397066 P0DMU3 169 aa10.93□□□□□ -0.66
CCNF-202ENST00000397066 FAM231AP0DMU4 169 aa10.93□□□□□ -0.66
CCNF-202ENST00000397066 FAM231CP0DMU5 169 aa10.93□□□□□ -0.66
CCNF-202ENST00000397066 IGLV4-3A0A075B6K6 122 aa10.92□□□□□ -0.66
CCNF-202ENST00000397066 A0A0J9YX75 114 aa10.92□□□□□ -0.66
CCNF-202ENST00000397066 A6NDX4 124 aa10.92□□□□□ -0.66
CCNF-202ENST00000397066 DUX3Q96PT4 197 aa10.92□□□□□ -0.66
CCNF-202ENST00000397066 A0A0B4J2C4 111 aa10.92□□□□□ -0.66
CCNF-202ENST00000397066 NCOR2Q9Y618 2525 aa10.92□□□□□ -0.66
CCNF-202ENST00000397066 K7EMT4 169 aa10.92□□□□□ -0.66
CCNF-202ENST00000397066 C9orf85Q96MD7 179 aa10.92□□□□□ -0.66
CCNF-202ENST00000397066 BSNQ9UPA5 3926 aa10.92□□□□□ -0.66
CCNF-202ENST00000397066 TEX49A0A1B0GTD5 131 aa10.91□□□□□ -0.66
CCNF-202ENST00000397066 H3BMM0 161 aa10.91□□□□□ -0.66
CCNF-202ENST00000397066 UBE2WQ96B02 151 aa10.91□□□□□ -0.66
CCNF-202ENST00000397066 A0A0U1RRA0 63 aa10.9□□□□□ -0.66
CCNF-202ENST00000397066 C19orf84I3L1E1 186 aa10.9□□□□□ -0.66
CCNF-202ENST00000397066 AMELXQ99217 191 aa10.9□□□□□ -0.66
CCNF-202ENST00000397066 C10orf99Q6UWK7 81 aa10.9□□□□□ -0.66
CCNF-202ENST00000397066 SS18L2Q9UHA2 77 aa10.9□□□□□ -0.66
CCNF-202ENST00000397066 B5MCH6 92 aa10.89□□□□□ -0.67
CCNF-202ENST00000397066 TRIAP1O43715 76 aa10.89□□□□□ -0.67
CCNF-202ENST00000397066 KHDC1LQ5JSQ8 128 aa10.89□□□□□ -0.67
CCNF-202ENST00000397066 MSMBP08118 114 aa10.89□□□□□ -0.67
CCNF-202ENST00000397066 IGHV3-38A0A0C4DH36 116 aa10.89□□□□□ -0.67
CCNF-202ENST00000397066 IGLV1-40P01703 118 aa10.89□□□□□ -0.67
CCNF-202ENST00000397066 PROK1P58294 105 aa10.89□□□□□ -0.67
CCNF-202ENST00000397066 A8MZ25 164 aa10.88□□□□□ -0.67
CCNF-202ENST00000397066 ICOSQ9Y6W8 199 aa10.88□□□□□ -0.67
CCNF-202ENST00000397066 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.88□□□□□ -0.67
CCNF-202ENST00000397066 IGKV2-29A2NJV5 120 aaPredicted RBP10.88□□□□□ -0.67
CCNF-202ENST00000397066 GNLYP22749 145 aa10.88□□□□□ -0.67
CCNF-202ENST00000397066 SBSPONQ8IVN8 264 aa10.88□□□□□ -0.67
CCNF-202ENST00000397066 NOTCH3Q9UM47 2321 aa10.88□□□□□ -0.67
CCNF-202ENST00000397066 ELANEP08246 267 aa10.88□□□□□ -0.67
CCNF-202ENST00000397066 C15orf53Q8NAA6 179 aa10.88□□□□□ -0.67
CCNF-202ENST00000397066 CHD8Q9HCK8 2581 aa10.87□□□□□ -0.67
CCNF-202ENST00000397066 RPL13AP40429 203 aaKnown RBP10.87□□□□□ -0.67
CCNF-202ENST00000397066 DAND5Q8N907 189 aa10.87□□□□□ -0.67
CCNF-202ENST00000397066 TRBV10-2A0A0K0K1G8 114 aa10.87□□□□□ -0.67
CCNF-202ENST00000397066 IGHV4-59P01825 116 aa10.87□□□□□ -0.67
CCNF-202ENST00000397066 GAGE5Q13069 117 aa10.87□□□□□ -0.67
CCNF-202ENST00000397066 GAGE6Q13070 117 aa10.87□□□□□ -0.67
CCNF-202ENST00000397066 CLEC2BQ92478 149 aa10.87□□□□□ -0.67
CCNF-202ENST00000397066 IGHV4-30-2A0A087WSY4 118 aa10.87□□□□□ -0.67
CCNF-202ENST00000397066 DEFB131AP59861 70 aa10.87□□□□□ -0.67
CCNF-202ENST00000397066 CIRBPQ14011 172 aaKnown RBP10.87□□□□□ -0.67
CCNF-202ENST00000397066 YAE1D1Q9NRH1 226 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms