RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 C4orf48Q5BLP8 95 aa11.81□□□□□ -0.52
GNE-202ENST00000396594 ZNF318Q5VUA4 2279 aa11.81□□□□□ -0.52
GNE-202ENST00000396594 TRBV10-2A0A0K0K1G8 114 aa11.81□□□□□ -0.52
GNE-202ENST00000396594 MIAQ16674 131 aa11.81□□□□□ -0.52
GNE-202ENST00000396594 NTN5Q8WTR8 489 aaPredicted RBP11.81□□□□□ -0.52
GNE-202ENST00000396594 MP68P56378 58 aa11.81□□□□□ -0.52
GNE-202ENST00000396594 IGHV3-30P01768 117 aa11.81□□□□□ -0.52
GNE-202ENST00000396594 IGHV3-33P01772 117 aa11.81□□□□□ -0.52
GNE-202ENST00000396594 IGHV3-30-3P0DP02 117 aa11.81□□□□□ -0.52
GNE-202ENST00000396594 IGHV3-30-5P0DP03 117 aa11.81□□□□□ -0.52
GNE-202ENST00000396594 TEN1Q86WV5 123 aa11.81□□□□□ -0.52
GNE-202ENST00000396594 ZFAND2AQ8N6M9 145 aa11.81□□□□□ -0.52
GNE-202ENST00000396594 TIMM17BO60830 172 aa11.8□□□□□ -0.52
GNE-202ENST00000396594 CLPSL2Q6UWE3 100 aa11.8□□□□□ -0.52
GNE-202ENST00000396594 SPANXB1Q9NS25 103 aaPredicted RBP11.8□□□□□ -0.52
GNE-202ENST00000396594 TECTAO75443 2155 aa11.8□□□□□ -0.52
GNE-202ENST00000396594 MALRD1Q5VYJ5 2156 aa11.8□□□□□ -0.52
GNE-202ENST00000396594 PSMB8P28062 276 aa11.8□□□□□ -0.52
GNE-202ENST00000396594 GATA1P15976 413 aaPredicted RBP11.8□□□□□ -0.52
GNE-202ENST00000396594 E7EUB6 86 aa11.8□□□□□ -0.52
GNE-202ENST00000396594 MRAPQ8TCY5 172 aa11.8□□□□□ -0.52
GNE-202ENST00000396594 U3KQK5 164 aa11.8□□□□□ -0.52
GNE-202ENST00000396594 TRAV10A0A0B4J240 114 aa11.8□□□□□ -0.52
GNE-202ENST00000396594 IBA57-AS1B1ANH7 110 aa11.8□□□□□ -0.52
GNE-202ENST00000396594 PLA2G2EQ9NZK7 142 aa11.8□□□□□ -0.52
GNE-202ENST00000396594 Q6ZSV7 163 aa11.79□□□□□ -0.52
GNE-202ENST00000396594 MSRB1Q9NZV6 116 aa11.79□□□□□ -0.52
GNE-202ENST00000396594 C19orf84I3L1E1 186 aa11.79□□□□□ -0.52
GNE-202ENST00000396594 COX7BP24311 80 aa11.78□□□□□ -0.52
GNE-202ENST00000396594 PCP2Q8IVA1 136 aa11.78□□□□□ -0.52
GNE-202ENST00000396594 GTF3C1Q12789 2109 aa11.78□□□□□ -0.52
GNE-202ENST00000396594 PROP1O75360 226 aa11.78□□□□□ -0.52
GNE-202ENST00000396594 ATP5EP2Q5VTU8 51 aa11.78□□□□□ -0.52
GNE-202ENST00000396594 CRIP3Q6Q6R5 217 aa11.78□□□□□ -0.52
GNE-202ENST00000396594 IGLV1-40P01703 118 aa11.78□□□□□ -0.52
GNE-202ENST00000396594 RNASE13Q5GAN3 156 aaKnown RBP11.78□□□□□ -0.52
GNE-202ENST00000396594 FAM222AQ5U5X8 452 aa11.78□□□□□ -0.52
GNE-202ENST00000396594 CACNA1BQ00975 2339 aa11.78□□□□□ -0.52
GNE-202ENST00000396594 BRWD1-AS2P59051 145 aa11.77□□□□□ -0.53
GNE-202ENST00000396594 CHCHD7Q9BUK0 85 aa11.77□□□□□ -0.53
GNE-202ENST00000396594 DIDO1Q9BTC0 2240 aaKnown RBP11.77□□□□□ -0.53
GNE-202ENST00000396594 hADV29S1A0JD25 119 aa11.77□□□□□ -0.53
GNE-202ENST00000396594 IGHV4-4A0A075B6R2 117 aa11.77□□□□□ -0.53
GNE-202ENST00000396594 NREPQ16612 68 aa11.77□□□□□ -0.53
GNE-202ENST00000396594 NCOR1O75376 2440 aa11.76□□□□□ -0.53
GNE-202ENST00000396594 IGLV2-8P01709 118 aa11.76□□□□□ -0.53
GNE-202ENST00000396594 ZNF702PQ9H963 129 aa11.76□□□□□ -0.53
GNE-202ENST00000396594 F8WDY8 70 aa11.76□□□□□ -0.53
GNE-202ENST00000396594 ANKRD39Q53RE8 183 aa11.76□□□□□ -0.53
GNE-202ENST00000396594 CEP250Q9BV73 2442 aa11.76□□□□□ -0.53
GNE-202ENST00000396594 TDRG1Q3Y452 100 aa11.75□□□□□ -0.53
GNE-202ENST00000396594 ALPK3Q96L96 1907 aa11.75□□□□□ -0.53
GNE-202ENST00000396594 DYSFO75923 2080 aa11.75□□□□□ -0.53
GNE-202ENST00000396594 MRPS36P82909 103 aaKnown RBP11.75□□□□□ -0.53
GNE-202ENST00000396594 TRBV12-3P01733 135 aa11.74□□□□□ -0.53
GNE-202ENST00000396594 RBM3P98179 157 aaKnown RBP11.74□□□□□ -0.53
GNE-202ENST00000396594 KLK12Q9UKR0 248 aa11.74□□□□□ -0.53
GNE-202ENST00000396594 REG3AQ06141 175 aa11.74□□□□□ -0.53
GNE-202ENST00000396594 HIST2H2BDQ6DRA6 164 aa11.74□□□□□ -0.53
GNE-202ENST00000396594 HIGD2BQ4VC39 106 aa11.73□□□□□ -0.53
GNE-202ENST00000396594 NRGNQ92686 78 aa11.73□□□□□ -0.53
GNE-202ENST00000396594 ZNF706Q9Y5V0 76 aaPredicted RBP11.73□□□□□ -0.53
GNE-202ENST00000396594 NEXN-AS1Q8NBZ9 246 aa11.73□□□□□ -0.53
GNE-202ENST00000396594 TRBV27A0A0K0K1C4 114 aa11.72□□□□□ -0.53
GNE-202ENST00000396594 K7ERJ3 54 aa11.72□□□□□ -0.53
GNE-202ENST00000396594 RPL39P62891 51 aaKnown RBP11.72□□□□□ -0.53
GNE-202ENST00000396594 ABCA4P78363 2273 aa11.72□□□□□ -0.53
GNE-202ENST00000396594 LRP4O75096 1905 aa11.72□□□□□ -0.53
GNE-202ENST00000396594 GPR179Q6PRD1 2367 aa11.72□□□□□ -0.53
GNE-202ENST00000396594 MIR7-3HGQ8N6C7 128 aa11.71□□□□□ -0.53
GNE-202ENST00000396594 TRBV6-8A0A0A6YYG3 113 aa11.7□□□□□ -0.54
GNE-202ENST00000396594 A0A1B0GX51 115 aa11.7□□□□□ -0.54
GNE-202ENST00000396594 KLLNB2CW77 178 aa11.7□□□□□ -0.54
GNE-202ENST00000396594 USF3Q68DE3 2245 aa11.7□□□□□ -0.54
GNE-202ENST00000396594 DEFB131BA0A096LNP1 70 aa11.7□□□□□ -0.54
GNE-202ENST00000396594 FAM110AQ9BQ89 295 aa11.7□□□□□ -0.54
GNE-202ENST00000396594 C16orf95Q9H693 158 aa11.7□□□□□ -0.54
GNE-202ENST00000396594 CFAP126Q5VTH2 177 aa11.7□□□□□ -0.54
GNE-202ENST00000396594 WFDC11Q8NEX6 87 aa11.7□□□□□ -0.54
GNE-202ENST00000396594 COX17Q14061 63 aa11.69□□□□□ -0.54
GNE-202ENST00000396594 RNF183Q96D59 192 aa11.69□□□□□ -0.54
GNE-202ENST00000396594 ZNF295-AS1Q8N0V1 137 aa11.69□□□□□ -0.54
GNE-202ENST00000396594 Q6ZUT4 128 aa11.69□□□□□ -0.54
GNE-202ENST00000396594 COL6A6A6NMZ7 2263 aa11.69□□□□□ -0.54
GNE-202ENST00000396594 IGLV10-54A0A075B6I4 117 aa11.69□□□□□ -0.54
GNE-202ENST00000396594 LINC00474Q9P2X8 69 aa11.69□□□□□ -0.54
GNE-202ENST00000396594 RIF1Q5UIP0 2472 aaKnown RBP11.69□□□□□ -0.54
GNE-202ENST00000396594 CEP192Q8TEP8 1941 aa11.69□□□□□ -0.54
GNE-202ENST00000396594 LELP1Q5T871 98 aa11.68□□□□□ -0.54
GNE-202ENST00000396594 PTH2Q96A98 100 aa11.68□□□□□ -0.54
GNE-202ENST00000396594 TMEM223A0PJW6 202 aa11.68□□□□□ -0.54
GNE-202ENST00000396594 M0QY20 66 aa11.68□□□□□ -0.54
GNE-202ENST00000396594 LINC00322Q6ZN03 302 aaPredicted RBP11.68□□□□□ -0.54
GNE-202ENST00000396594 ZGRF1Q86YA3 2104 aa11.68□□□□□ -0.54
GNE-202ENST00000396594 ZNF80P51504 273 aaPredicted RBP11.68□□□□□ -0.54
GNE-202ENST00000396594 Q6ZPA2 131 aa11.68□□□□□ -0.54
GNE-202ENST00000396594 CHCHD10Q8WYQ3 142 aaPredicted RBP11.68□□□□□ -0.54
GNE-202ENST00000396594 CRYGDP07320 174 aa11.67□□□□□ -0.54
GNE-202ENST00000396594 MAJINQ3KP22 176 aa11.67□□□□□ -0.54
GNE-202ENST00000396594 Q6ZTI0 123 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms