RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 ODF3Q96PU9 254 aa6.52□□□□□ -1.37
NDE1-202ENST00000396355 TMEM258P61165 79 aa6.52□□□□□ -1.37
NDE1-202ENST00000396355 CD177Q8N6Q3 437 aa6.52□□□□□ -1.37
NDE1-202ENST00000396355 MDFICQ9P1T7 246 aa6.52□□□□□ -1.37
NDE1-202ENST00000396355 TRBV7-3A0A075B6L6 115 aa6.51□□□□□ -1.37
NDE1-202ENST00000396355 C15orf65H3BRN8 121 aa6.51□□□□□ -1.37
NDE1-202ENST00000396355 KRTAP10-9P60411 292 aa6.51□□□□□ -1.37
NDE1-202ENST00000396355 Q6Q795 121 aa6.51□□□□□ -1.37
NDE1-202ENST00000396355 Q6ZS46 218 aa6.51□□□□□ -1.37
NDE1-202ENST00000396355 C1orf229Q6ZS94 237 aaPredicted RBP6.51□□□□□ -1.37
NDE1-202ENST00000396355 ICOSQ9Y6W8 199 aa6.51□□□□□ -1.37
NDE1-202ENST00000396355 ATRQ13535 2644 aa6.51□□□□□ -1.37
NDE1-202ENST00000396355 DAD1P61803 113 aa6.51□□□□□ -1.37
NDE1-202ENST00000396355 PRR25Q96S07 402 aa6.51□□□□□ -1.37
NDE1-202ENST00000396355 SNURFQ9Y675 71 aa6.51□□□□□ -1.37
NDE1-202ENST00000396355 LRBAP50851 2863 aa6.51□□□□□ -1.37
NDE1-202ENST00000396355 CRYBG3Q68DQ2 2970 aa6.51□□□□□ -1.37
NDE1-202ENST00000396355 NBEAL1Q6ZS30 2694 aa6.51□□□□□ -1.37
NDE1-202ENST00000396355 MALP21145 153 aa6.51□□□□□ -1.37
NDE1-202ENST00000396355 LINC00336Q6ZUF6 198 aa6.51□□□□□ -1.37
NDE1-202ENST00000396355 COPS9Q8WXC6 57 aa6.51□□□□□ -1.37
NDE1-202ENST00000396355 Q9HAA7 133 aa6.51□□□□□ -1.37
NDE1-202ENST00000396355 RAI1Q7Z5J4 1906 aaPredicted RBP6.51□□□□□ -1.37
NDE1-202ENST00000396355 A0A096LNJ9 63 aa6.5□□□□□ -1.37
NDE1-202ENST00000396355 C19orf84I3L1E1 186 aa6.5□□□□□ -1.37
NDE1-202ENST00000396355 TIMM17BO60830 172 aa6.5□□□□□ -1.37
NDE1-202ENST00000396355 LINC01559Q495D7 138 aa6.5□□□□□ -1.37
NDE1-202ENST00000396355 SPTSSBQ8NFR3 76 aa6.5□□□□□ -1.37
NDE1-202ENST00000396355 STAB1Q9NY15 2570 aa6.5□□□□□ -1.37
NDE1-202ENST00000396355 A0A087WWL8 130 aa6.5□□□□□ -1.37
NDE1-202ENST00000396355 C11orf86A6NJI1 115 aa6.5□□□□□ -1.37
NDE1-202ENST00000396355 TRIAP1O43715 76 aa6.5□□□□□ -1.37
NDE1-202ENST00000396355 IGHG3P01860 377 aa6.5□□□□□ -1.37
NDE1-202ENST00000396355 TRGV3P03979 118 aa6.5□□□□□ -1.37
NDE1-202ENST00000396355 CCL3L1P16619 93 aa6.5□□□□□ -1.37
NDE1-202ENST00000396355 ZNF134P52741 427 aa6.5□□□□□ -1.37
NDE1-202ENST00000396355 SLC25A29Q8N8R3 303 aa6.5□□□□□ -1.37
NDE1-202ENST00000396355 FN1P02751 2386 aaKnown RBP6.5□□□□□ -1.37
NDE1-202ENST00000396355 LRCOL1A6NCL2 159 aa6.5□□□□□ -1.37
NDE1-202ENST00000396355 THBDP07204 575 aa6.5□□□□□ -1.37
NDE1-202ENST00000396355 INAFM2P0DMQ5 153 aa6.5□□□□□ -1.37
NDE1-202ENST00000396355 WFDC9Q8NEX5 89 aa6.5□□□□□ -1.37
NDE1-202ENST00000396355 DPH3Q96FX2 82 aa6.5□□□□□ -1.37
NDE1-202ENST00000396355 IGKV1D-17A0A075B6S4 117 aa6.49□□□□□ -1.37
NDE1-202ENST00000396355 WI2-2373I1.2A0A1W2PRP0 233 aa6.49□□□□□ -1.37
NDE1-202ENST00000396355 SRRM4A7MD48 611 aaKnown RBP6.49□□□□□ -1.37
NDE1-202ENST00000396355 RPL39LQ96EH5 51 aaKnown RBP6.49□□□□□ -1.37
NDE1-202ENST00000396355 IGHV1-18A0A0C4DH31 117 aa6.49□□□□□ -1.37
NDE1-202ENST00000396355 C19orf71A6NCJ1 209 aa6.49□□□□□ -1.37
NDE1-202ENST00000396355 ADORA2A-AS1P86434 159 aa6.49□□□□□ -1.37
NDE1-202ENST00000396355 FAM90A1Q86YD7 464 aa6.49□□□□□ -1.37
NDE1-202ENST00000396355 SMIM2Q9BVW6 85 aa6.49□□□□□ -1.37
NDE1-202ENST00000396355 ZFHX3Q15911 3703 aa6.49□□□□□ -1.37
NDE1-202ENST00000396355 CELSR2Q9HCU4 2923 aa6.49□□□□□ -1.37
NDE1-202ENST00000396355 OVOL1O14753 267 aa6.49□□□□□ -1.37
NDE1-202ENST00000396355 FAM223AQ8IWN6 122 aa6.49□□□□□ -1.37
NDE1-202ENST00000396355 TIMM21Q9BVV7 248 aa6.49□□□□□ -1.37
NDE1-202ENST00000396355 PRSS22Q9GZN4 317 aa6.49□□□□□ -1.37
NDE1-202ENST00000396355 MRPL36Q9P0J6 103 aaKnown RBP6.49□□□□□ -1.37
NDE1-202ENST00000396355 NXPH4O95158 308 aa6.48□□□□□ -1.37
NDE1-202ENST00000396355 IGLV1-44P01699 117 aa6.48□□□□□ -1.37
NDE1-202ENST00000396355 IGHV3-33P01772 117 aa6.48□□□□□ -1.37
NDE1-202ENST00000396355 SEM1Q6ZVN7 128 aa6.48□□□□□ -1.37
NDE1-202ENST00000396355 TMEM14BQ9NUH8 114 aa6.48□□□□□ -1.37
NDE1-202ENST00000396355 SPANXCQ9NY87 97 aa6.48□□□□□ -1.37
NDE1-202ENST00000396355 F8WDY8 70 aa6.48□□□□□ -1.37
NDE1-202ENST00000396355 ACYP1P07311 99 aa6.48□□□□□ -1.37
NDE1-202ENST00000396355 CD28P10747 220 aa6.48□□□□□ -1.37
NDE1-202ENST00000396355 RPL39P62891 51 aaKnown RBP6.48□□□□□ -1.37
NDE1-202ENST00000396355 WT1-ASQ06250 92 aa6.48□□□□□ -1.37
NDE1-202ENST00000396355 C2orf48Q96LS8 159 aa6.48□□□□□ -1.37
NDE1-202ENST00000396355 C14orf132Q9NPU4 83 aa6.48□□□□□ -1.37
NDE1-202ENST00000396355 HIVEP1P15822 2718 aa6.48□□□□□ -1.37
NDE1-202ENST00000396355 Q6ZSV7 163 aa6.48□□□□□ -1.37
NDE1-202ENST00000396355 USP17L23D6RBM5 183 aa6.47□□□□□ -1.37
NDE1-202ENST00000396355 LYNX1G3V0Z9 82 aa6.47□□□□□ -1.37
NDE1-202ENST00000396355 IGHG2P01859 326 aa6.47□□□□□ -1.37
NDE1-202ENST00000396355 LYNX1P0DP58 116 aa6.47□□□□□ -1.37
NDE1-202ENST00000396355 DAZ2Q13117 558 aaKnown RBP6.47□□□□□ -1.37
NDE1-202ENST00000396355 DAZ4Q86SG3 579 aaKnown RBP6.47□□□□□ -1.37
NDE1-202ENST00000396355 DYNAPQ8N1N2 210 aa6.47□□□□□ -1.37
NDE1-202ENST00000396355 SERP2Q8N6R1 65 aa6.47□□□□□ -1.37
NDE1-202ENST00000396355 DAZ1Q9NQZ3 744 aaKnown RBP6.47□□□□□ -1.37
NDE1-202ENST00000396355 DAZ3Q9NR90 486 aaKnown RBP6.47□□□□□ -1.37
NDE1-202ENST00000396355 NDUFA12Q9UI09 145 aa6.47□□□□□ -1.37
NDE1-202ENST00000396355 TRAV12-2A0A075B6T6 113 aa6.47□□□□□ -1.37
NDE1-202ENST00000396355 A0A0J9YY99 117 aa6.47□□□□□ -1.37
NDE1-202ENST00000396355 RNASE4P34096 147 aaKnown RBP6.47□□□□□ -1.37
NDE1-202ENST00000396355 LINC01560Q8TB33 94 aa6.47□□□□□ -1.37
NDE1-202ENST00000396355 OPRPNQ99935 248 aaPredicted RBP6.47□□□□□ -1.37
NDE1-202ENST00000396355 AGPAT4-IT1Q9H0P7 198 aa6.47□□□□□ -1.37
NDE1-202ENST00000396355 IGHV3-73A0A0B4J1V6 119 aa6.47□□□□□ -1.37
NDE1-202ENST00000396355 H3BT86 120 aa6.47□□□□□ -1.37
NDE1-202ENST00000396355 SOCS3O14543 225 aa6.47□□□□□ -1.37
NDE1-202ENST00000396355 SRRM5B3KS81 715 aa6.46□□□□□ -1.37
NDE1-202ENST00000396355 ECSCRQ19T08 205 aa6.46□□□□□ -1.37
NDE1-202ENST00000396355 PIP4P2Q8N4L2 257 aa6.46□□□□□ -1.37
NDE1-202ENST00000396355 MLST8Q9BVC4 326 aa6.46□□□□□ -1.37
NDE1-202ENST00000396355 CTSZQ9UBR2 303 aa6.46□□□□□ -1.37
NDE1-202ENST00000396355 IGFL2Q6UWQ7 119 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms