RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 CCL3L1P16619 93 aa5.84□□□□□ -1.47
VTI1A-201ENST00000393077 PMAIP1Q13794 54 aa5.84□□□□□ -1.47
VTI1A-201ENST00000393077 LY6G5BQ8NDX9 201 aa5.84□□□□□ -1.47
VTI1A-201ENST00000393077 CEP192Q8TEP8 1941 aa5.84□□□□□ -1.47
VTI1A-201ENST00000393077 A0A087WVE0 104 aa5.84□□□□□ -1.47
VTI1A-201ENST00000393077 VSIG2Q96IQ7 327 aa5.84□□□□□ -1.47
VTI1A-201ENST00000393077 LAMTOR3Q9UHA4 124 aa5.84□□□□□ -1.47
VTI1A-201ENST00000393077 HOXD3P31249 432 aaPredicted RBP5.84□□□□□ -1.47
VTI1A-201ENST00000393077 DAND5Q8N907 189 aa5.84□□□□□ -1.47
VTI1A-201ENST00000393077 TNRC6BQ9UPQ9 1833 aaKnown RBP5.84□□□□□ -1.48
VTI1A-201ENST00000393077 SDHAF1A6NFY7 115 aa5.84□□□□□ -1.48
VTI1A-201ENST00000393077 NBL1P41271 181 aa5.84□□□□□ -1.48
VTI1A-201ENST00000393077 TIRAPP58753 221 aa5.84□□□□□ -1.48
VTI1A-201ENST00000393077 HAMPP81172 84 aa5.84□□□□□ -1.48
VTI1A-201ENST00000393077 EYSQ5T1H1 3165 aa5.84□□□□□ -1.48
VTI1A-201ENST00000393077 ZFYVE26Q68DK2 2539 aa5.83□□□□□ -1.48
VTI1A-201ENST00000393077 C14orf132Q9NPU4 83 aa5.83□□□□□ -1.48
VTI1A-201ENST00000393077 MOB4Q9Y3A3 225 aa5.83□□□□□ -1.48
VTI1A-201ENST00000393077 RPL39P62891 51 aaKnown RBP5.83□□□□□ -1.48
VTI1A-201ENST00000393077 FAM223AQ8IWN6 122 aa5.83□□□□□ -1.48
VTI1A-201ENST00000393077 LINC00311Q8N616 119 aa5.83□□□□□ -1.48
VTI1A-201ENST00000393077 POM121L12Q8N7R1 296 aa5.83□□□□□ -1.48
VTI1A-201ENST00000393077 A0A0J9YXV3 536 aa5.83□□□□□ -1.48
VTI1A-201ENST00000393077 A0A0J9YXY3 114 aa5.83□□□□□ -1.48
VTI1A-201ENST00000393077 TMEM86BQ8N661 226 aa5.83□□□□□ -1.48
VTI1A-201ENST00000393077 CCDC168Q8NDH2 2452 aa5.83□□□□□ -1.48
VTI1A-201ENST00000393077 ADAMTS20P59510 1910 aa5.82□□□□□ -1.48
VTI1A-201ENST00000393077 RNASE4P34096 147 aaKnown RBP5.82□□□□□ -1.48
VTI1A-201ENST00000393077 ZNF80P51504 273 aaPredicted RBP5.82□□□□□ -1.48
VTI1A-201ENST00000393077 PRB3Q04118 309 aaPredicted RBP5.82□□□□□ -1.48
VTI1A-201ENST00000393077 VPS13AQ96RL7 3174 aa5.82□□□□□ -1.48
VTI1A-201ENST00000393077 TMEM223A0PJW6 202 aa5.82□□□□□ -1.48
VTI1A-201ENST00000393077 E7EUB6 86 aa5.82□□□□□ -1.48
VTI1A-201ENST00000393077 LYNX1G3V0Z9 82 aa5.82□□□□□ -1.48
VTI1A-201ENST00000393077 COX7A2LO14548 114 aa5.82□□□□□ -1.48
VTI1A-201ENST00000393077 LYNX1P0DP58 116 aa5.82□□□□□ -1.48
VTI1A-201ENST00000393077 OXLD1Q5BKU9 147 aa5.82□□□□□ -1.48
VTI1A-201ENST00000393077 TET2Q6N021 2002 aaPredicted RBP5.82□□□□□ -1.48
VTI1A-201ENST00000393077 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.82□□□□□ -1.48
VTI1A-201ENST00000393077 IGKV3-15P01624 115 aa5.82□□□□□ -1.48
VTI1A-201ENST00000393077 C17orf58Q2M2W7 97 aa5.82□□□□□ -1.48
VTI1A-201ENST00000393077 ZNF876PQ49A33 203 aa5.82□□□□□ -1.48
VTI1A-201ENST00000393077 C19orf54Q5BKX5 351 aa5.82□□□□□ -1.48
VTI1A-201ENST00000393077 ZNF491Q8N8L2 437 aa5.82□□□□□ -1.48
VTI1A-201ENST00000393077 IL17DQ8TAD2 202 aa5.82□□□□□ -1.48
VTI1A-201ENST00000393077 WDFY4Q6ZS81 3184 aa5.82□□□□□ -1.48
VTI1A-201ENST00000393077 Q9HAA7 133 aa5.81□□□□□ -1.48
VTI1A-201ENST00000393077 TPSG1Q9NRR2 321 aa5.81□□□□□ -1.48
VTI1A-201ENST00000393077 A0A087WWL8 130 aa5.81□□□□□ -1.48
VTI1A-201ENST00000393077 MRPS36P82909 103 aaKnown RBP5.81□□□□□ -1.48
VTI1A-201ENST00000393077 LAMA1P25391 3075 aa5.81□□□□□ -1.48
VTI1A-201ENST00000393077 ELANEP08246 267 aa5.81□□□□□ -1.48
VTI1A-201ENST00000393077 HTN1P15515 57 aa5.81□□□□□ -1.48
VTI1A-201ENST00000393077 NXPH4O95158 308 aa5.8□□□□□ -1.48
VTI1A-201ENST00000393077 TIMM17AQ99595 171 aa5.8□□□□□ -1.48
VTI1A-201ENST00000393077 SNURFQ9Y675 71 aa5.8□□□□□ -1.48
VTI1A-201ENST00000393077 DNAH14Q0VDD8 3507 aa5.8□□□□□ -1.48
VTI1A-201ENST00000393077 C6orf226Q5I0X4 101 aa5.8□□□□□ -1.48
VTI1A-201ENST00000393077 Q6JHZ5 121 aa5.8□□□□□ -1.48
VTI1A-201ENST00000393077 IGKV1-17P01599 117 aa5.8□□□□□ -1.48
VTI1A-201ENST00000393077 NRACQ8N912 160 aa5.8□□□□□ -1.48
VTI1A-201ENST00000393077 CTSZQ9UBR2 303 aa5.8□□□□□ -1.48
VTI1A-201ENST00000393077 CPAMD8Q8IZJ3 1885 aa5.8□□□□□ -1.48
VTI1A-201ENST00000393077 LRP4O75096 1905 aa5.8□□□□□ -1.48
VTI1A-201ENST00000393077 F6UB75 175 aa5.8□□□□□ -1.48
VTI1A-201ENST00000393077 K7ENP7 123 aa5.8□□□□□ -1.48
VTI1A-201ENST00000393077 BUB3O43684 328 aa5.8□□□□□ -1.48
VTI1A-201ENST00000393077 IGHV1-46P01743 117 aa5.8□□□□□ -1.48
VTI1A-201ENST00000393077 IGHV3-30-3P0DP02 117 aa5.8□□□□□ -1.48
VTI1A-201ENST00000393077 XCL1P47992 114 aa5.8□□□□□ -1.48
VTI1A-201ENST00000393077 SNRPD3P62318 126 aaKnown RBP5.8□□□□□ -1.48
VTI1A-201ENST00000393077 PAX8Q06710 450 aa5.8□□□□□ -1.48
VTI1A-201ENST00000393077 MIAQ16674 131 aa5.8□□□□□ -1.48
VTI1A-201ENST00000393077 SOSTDC1Q6X4U4 206 aa5.8□□□□□ -1.48
VTI1A-201ENST00000393077 XCL2Q9UBD3 114 aa5.8□□□□□ -1.48
VTI1A-201ENST00000393077 FAM215AQ9Y5M1 114 aa5.8□□□□□ -1.48
VTI1A-201ENST00000393077 IGFL3Q6UXB1 125 aa5.79□□□□□ -1.48
VTI1A-201ENST00000393077 ECSCRQ19T08 205 aa5.79□□□□□ -1.48
VTI1A-201ENST00000393077 COL6A3P12111 3177 aa5.79□□□□□ -1.48
VTI1A-201ENST00000393077 COL5A1P20908 1838 aaPredicted RBP5.79□□□□□ -1.48
VTI1A-201ENST00000393077 F8WEM9 126 aa5.78□□□□□ -1.48
VTI1A-201ENST00000393077 ZNF833PQ6ZTB9 187 aa5.78□□□□□ -1.48
VTI1A-201ENST00000393077 DYNLRB2Q8TF09 96 aa5.78□□□□□ -1.48
VTI1A-201ENST00000393077 TOMM7Q9P0U1 55 aa5.78□□□□□ -1.48
VTI1A-201ENST00000393077 PRB1P04280 392 aa5.78□□□□□ -1.48
VTI1A-201ENST00000393077 COX6B1P14854 86 aa5.78□□□□□ -1.48
VTI1A-201ENST00000393077 TSPEAR-AS2P59090 65 aa5.78□□□□□ -1.48
VTI1A-201ENST00000393077 ENHOQ6UWT2 76 aa5.78□□□□□ -1.48
VTI1A-201ENST00000393077 LY6HO94772 140 aa5.78□□□□□ -1.48
VTI1A-201ENST00000393077 C1orf229Q6ZS94 237 aaPredicted RBP5.78□□□□□ -1.48
VTI1A-201ENST00000393077 TMEM61Q8N0U2 210 aa5.78□□□□□ -1.48
VTI1A-201ENST00000393077 RNASE6Q93091 150 aaKnown RBP5.78□□□□□ -1.48
VTI1A-201ENST00000393077 UPK3BQ9BT76 320 aa5.78□□□□□ -1.48
VTI1A-201ENST00000393077 TRAV13-2A0A0B4J235 113 aa5.77□□□□□ -1.49
VTI1A-201ENST00000393077 OPRPNQ99935 248 aaPredicted RBP5.77□□□□□ -1.49
VTI1A-201ENST00000393077 DKK4Q9UBT3 224 aa5.77□□□□□ -1.49
VTI1A-201ENST00000393077 FAM223BA6NKX1 122 aa5.77□□□□□ -1.49
VTI1A-201ENST00000393077 ATP5EP56381 51 aaPredicted RBP5.77□□□□□ -1.49
VTI1A-201ENST00000393077 C5orf38Q86SI9 138 aa5.77□□□□□ -1.49
VTI1A-201ENST00000393077 LINC01561Q8N1V8 128 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms