RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 RPL7L1Q6DKI1 246 aaKnown RBP-0.72□□□□□ -2.52
SNORD28B-201ENST00000390993 OR9Q1Q8NGQ5 310 aa-0.72□□□□□ -2.52
SNORD28B-201ENST00000390993 CCDC115Q96NT0 180 aa-0.72□□□□□ -2.52
SNORD28B-201ENST00000390993 PLXNA2O75051 1894 aa-0.72□□□□□ -2.52
SNORD28B-201ENST00000390993 EIF3AQ14152 1382 aaKnown RBP-0.72□□□□□ -2.53
SNORD28B-201ENST00000390993 MXRA5Q9NR99 2828 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 ERCC6L2Q5T890 1561 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 PCLOQ9Y6V0 5065 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 DPM2O94777 84 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 COX6B1P14854 86 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 SPRR2AP35326 72 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 MT4P47944 62 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 POLR2HP52434 150 aaKnown RBP-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 HAMPP81172 84 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 TMEM78Q5T7P6 136 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 TMEM91Q6ZNR0 172 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 ATP11AUNQ6ZP68 121 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 SMIM4Q8WVI0 70 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 MAFIPQ8WZ33 124 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 RPRMQ9NS64 109 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 GVINP1Q7Z2Y8 2422 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 HERC2O95714 4834 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 ROCK1Q13464 1354 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 ATRQ13535 2644 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 PHIPQ8WWQ0 1821 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 WDR7Q9Y4E6 1490 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 TGP01266 2768 aa-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 A0A1W2PRE2 83 aa-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 J3KT08 172 aa-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 BCE1O60756 84 aa-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 PAEPP09466 180 aa-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 HLA-DRB4P13762 266 aa-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 PPP1R2P3Q6NXS1 205 aa-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 CTAGE3PQ8IX95 158 aa-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 TMEM35BQ8NCS4 154 aa-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 FXYD6Q9H0Q3 95 aa-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 HLA-DRB4X5D2U9 266 aa-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 FER1L6Q2WGJ9 1857 aa-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 MYH3P11055 1940 aa-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 SVEP1Q4LDE5 3571 aa-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 IBTKQ9P2D0 1353 aaPredicted RBP-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 SYNMO15061 1565 aa-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 NRXN2Q9P2S2 1712 aa-0.75□□□□□ -2.53
SNORD28B-201ENST00000390993 PARP14Q460N5 1801 aa-0.75□□□□□ -2.53
SNORD28B-201ENST00000390993 WNK3Q9BYP7 1800 aa-0.75□□□□□ -2.53
SNORD28B-201ENST00000390993 SPRR1BP22528 89 aa-0.75□□□□□ -2.53
SNORD28B-201ENST00000390993 CLLU1Q5K131 121 aa-0.75□□□□□ -2.53
SNORD28B-201ENST00000390993 SPANXN1Q5VSR9 72 aa-0.75□□□□□ -2.53
SNORD28B-201ENST00000390993 OR8I2Q8N0Y5 310 aa-0.75□□□□□ -2.53
SNORD28B-201ENST00000390993 BANF2Q9H503 90 aa-0.75□□□□□ -2.53
SNORD28B-201ENST00000390993 GID8Q9NWU2 228 aa-0.75□□□□□ -2.53
SNORD28B-201ENST00000390993 DNAJC15Q9Y5T4 150 aa-0.75□□□□□ -2.53
SNORD28B-201ENST00000390993 ZMYM4Q5VZL5 1548 aa-0.75□□□□□ -2.53
SNORD28B-201ENST00000390993 CASZ1Q86V15 1759 aa-0.75□□□□□ -2.53
SNORD28B-201ENST00000390993 TNFP01375 233 aa-0.76□□□□□ -2.53
SNORD28B-201ENST00000390993 TOMM20LQ6UXN7 152 aa-0.76□□□□□ -2.53
SNORD28B-201ENST00000390993 PTPRMP28827 1452 aa-0.76□□□□□ -2.53
SNORD28B-201ENST00000390993 DNAJC13O75165 2243 aa-0.76□□□□□ -2.53
SNORD28B-201ENST00000390993 PCNX1Q96RV3 2341 aa-0.76□□□□□ -2.53
SNORD28B-201ENST00000390993 KDM3BQ7LBC6 1761 aa-0.77□□□□□ -2.53
SNORD28B-201ENST00000390993 IQSEC2Q5JU85 1478 aa-0.77□□□□□ -2.53
SNORD28B-201ENST00000390993 DNAH6Q9C0G6 4158 aa-0.77□□□□□ -2.53
SNORD28B-201ENST00000390993 RPL7P18124 248 aaKnown RBP-0.77□□□□□ -2.53
SNORD28B-201ENST00000390993 KLK9Q2XQG4 91 aa-0.77□□□□□ -2.53
SNORD28B-201ENST00000390993 SAMD13Q5VXD3 122 aa-0.77□□□□□ -2.53
SNORD28B-201ENST00000390993 MNS1Q8NEH6 495 aa-0.77□□□□□ -2.53
SNORD28B-201ENST00000390993 HOPXQ9BPY8 73 aaPredicted RBP-0.77□□□□□ -2.53
SNORD28B-201ENST00000390993 PCBD2Q9H0N5 130 aa-0.77□□□□□ -2.53
SNORD28B-201ENST00000390993 NDUFA12Q9UI09 145 aa-0.77□□□□□ -2.53
SNORD28B-201ENST00000390993 R4GMQ9 66 aa-0.77□□□□□ -2.53
SNORD28B-201ENST00000390993 IFT172Q9UG01 1749 aa-0.78□□□□□ -2.53
SNORD28B-201ENST00000390993 SETD2Q9BYW2 2564 aaPredicted RBP-0.78□□□□□ -2.53
SNORD28B-201ENST00000390993 OVOS2A0A0G2JMS6 1433 aa-0.78□□□□□ -2.53
SNORD28B-201ENST00000390993 E5RI56 91 aa-0.78□□□□□ -2.53
SNORD28B-201ENST00000390993 I3L2K1 104 aa-0.78□□□□□ -2.53
SNORD28B-201ENST00000390993 PIRTP0C851 137 aa-0.78□□□□□ -2.53
SNORD28B-201ENST00000390993 SPRR2EP22531 72 aa-0.78□□□□□ -2.53
SNORD28B-201ENST00000390993 UBE2D1P51668 147 aa-0.78□□□□□ -2.53
SNORD28B-201ENST00000390993 C9orf116Q5BN46 136 aaPredicted RBP-0.78□□□□□ -2.53
SNORD28B-201ENST00000390993 LINC01545Q5VT33 79 aa-0.78□□□□□ -2.53
SNORD28B-201ENST00000390993 ZNF818PQ6ZRF7 136 aa-0.78□□□□□ -2.53
SNORD28B-201ENST00000390993 VSTM2AQ8TAG5 236 aa-0.78□□□□□ -2.53
SNORD28B-201ENST00000390993 SKA2Q8WVK7 121 aaPredicted RBP-0.78□□□□□ -2.53
SNORD28B-201ENST00000390993 SDF2Q99470 211 aa-0.78□□□□□ -2.53
SNORD28B-201ENST00000390993 SAR1AQ9NR31 198 aa-0.78□□□□□ -2.53
SNORD28B-201ENST00000390993 LRRC37A3O60309 1634 aa-0.78□□□□□ -2.54
SNORD28B-201ENST00000390993 GOLGA4Q13439 2230 aaKnown RBP-0.79□□□□□ -2.54
SNORD28B-201ENST00000390993 KDM5CP41229 1560 aa-0.79□□□□□ -2.54
SNORD28B-201ENST00000390993 NBPF19A0A087WUL8 3843 aa-0.79□□□□□ -2.54
SNORD28B-201ENST00000390993 TSC2P49815 1807 aa-0.79□□□□□ -2.54
SNORD28B-201ENST00000390993 CTXND1A0A1B0GTU2 59 aa-0.79□□□□□ -2.54
SNORD28B-201ENST00000390993 MT-ND4LP03901 98 aa-0.79□□□□□ -2.54
SNORD28B-201ENST00000390993 PIPP12273 146 aaPredicted RBP-0.79□□□□□ -2.54
SNORD28B-201ENST00000390993 NCS1P62166 190 aa-0.79□□□□□ -2.54
SNORD28B-201ENST00000390993 COX17Q14061 63 aa-0.79□□□□□ -2.54
SNORD28B-201ENST00000390993 TMEM128Q5BJH2 165 aa-0.79□□□□□ -2.54
SNORD28B-201ENST00000390993 TMEM244Q5VVB8 128 aa-0.79□□□□□ -2.54
SNORD28B-201ENST00000390993 TCTE3Q8IZS6 198 aa-0.79□□□□□ -2.54
SNORD28B-201ENST00000390993 SPANXCQ9NY87 97 aa-0.79□□□□□ -2.54
SNORD28B-201ENST00000390993 SIPA1L3O60292 1781 aaPredicted RBP-0.79□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms