RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 TRAV2A0A0B4J234 112 aa-3.03□□□□□ -2.89
RNU6-239P-201ENST00000390990 TRDV1A0A1B0GX56 115 aa-3.03□□□□□ -2.89
RNU6-239P-201ENST00000390990 PPP5D1E7EU14 171 aa-3.03□□□□□ -2.89
RNU6-239P-201ENST00000390990 HBDP02042 147 aa-3.03□□□□□ -2.89
RNU6-239P-201ENST00000390990 CRYGSP22914 178 aa-3.03□□□□□ -2.89
RNU6-239P-201ENST00000390990 PPP1R2P41236 205 aa-3.03□□□□□ -2.89
RNU6-239P-201ENST00000390990 CRYBA4P53673 196 aa-3.03□□□□□ -2.89
RNU6-239P-201ENST00000390990 LTC4SQ16873 150 aa-3.03□□□□□ -2.89
RNU6-239P-201ENST00000390990 LINC00305Q7Z4B0 112 aa-3.03□□□□□ -2.89
RNU6-239P-201ENST00000390990 ATP6V1G3Q96LB4 118 aa-3.03□□□□□ -2.89
RNU6-239P-201ENST00000390990 TECPR2O15040 1411 aa-3.03□□□□□ -2.89
RNU6-239P-201ENST00000390990 NSD3Q9BZ95 1437 aa-3.03□□□□□ -2.89
RNU6-239P-201ENST00000390990 MGAM2Q2M2H8 2515 aa-3.04□□□□□ -2.9
RNU6-239P-201ENST00000390990 TRAV13-1A0A0B4J241 112 aa-3.04□□□□□ -2.9
RNU6-239P-201ENST00000390990 CLPSL1A2RUU4 121 aa-3.04□□□□□ -2.9
RNU6-239P-201ENST00000390990 PGRMC1O00264 195 aaKnown RBP-3.04□□□□□ -2.9
RNU6-239P-201ENST00000390990 PCBD1P61457 104 aa-3.04□□□□□ -2.9
RNU6-239P-201ENST00000390990 SH3BGRL3Q9H299 93 aa-3.04□□□□□ -2.9
RNU6-239P-201ENST00000390990 LYRM2Q9NU23 88 aaPredicted RBP-3.04□□□□□ -2.9
RNU6-239P-201ENST00000390990 PCF11O94913 1555 aaKnown RBP-3.04□□□□□ -2.9
RNU6-239P-201ENST00000390990 MYH2Q9UKX2 1941 aa-3.05□□□□□ -2.9
RNU6-239P-201ENST00000390990 PNMA8CA0A1B0GUJ8 204 aa-3.05□□□□□ -2.9
RNU6-239P-201ENST00000390990 FAM92AA1XBS5 289 aa-3.05□□□□□ -2.9
RNU6-239P-201ENST00000390990 CST2P09228 141 aa-3.05□□□□□ -2.9
RNU6-239P-201ENST00000390990 LSM3P62310 102 aaKnown RBP-3.05□□□□□ -2.9
RNU6-239P-201ENST00000390990 BASP1P80723 227 aaKnown RBP-3.05□□□□□ -2.9
RNU6-239P-201ENST00000390990 AKR1C8PQ5T2L2 129 aa-3.05□□□□□ -2.9
RNU6-239P-201ENST00000390990 ADGRB1O14514 1584 aa-3.05□□□□□ -2.9
RNU6-239P-201ENST00000390990 H3BMG7 143 aa-3.06□□□□□ -2.9
RNU6-239P-201ENST00000390990 SRP9P49458 86 aaKnown RBP-3.06□□□□□ -2.9
RNU6-239P-201ENST00000390990 MRPS15P82914 257 aaKnown RBP-3.06□□□□□ -2.9
RNU6-239P-201ENST00000390990 PLGLB1Q02325 96 aa-3.06□□□□□ -2.9
RNU6-239P-201ENST00000390990 GAPVD1Q14C86 1478 aa-3.06□□□□□ -2.9
RNU6-239P-201ENST00000390990 TMEM91Q6ZNR0 172 aa-3.06□□□□□ -2.9
RNU6-239P-201ENST00000390990 STX19Q8N4C7 294 aa-3.06□□□□□ -2.9
RNU6-239P-201ENST00000390990 ARMC1Q9NVT9 282 aa-3.06□□□□□ -2.9
RNU6-239P-201ENST00000390990 A0A0C4DFX4 3053 aa-3.06□□□□□ -2.9
RNU6-239P-201ENST00000390990 H0YJX3 145 aa-3.07□□□□□ -2.9
RNU6-239P-201ENST00000390990 NCR2O95944 276 aa-3.07□□□□□ -2.9
RNU6-239P-201ENST00000390990 DYNLRB2Q8TF09 96 aa-3.07□□□□□ -2.9
RNU6-239P-201ENST00000390990 SS18L2Q9UHA2 77 aa-3.07□□□□□ -2.9
RNU6-239P-201ENST00000390990 CMYA5Q8N3K9 4069 aa-3.08□□□□□ -2.9
RNU6-239P-201ENST00000390990 SMIM23A6NLE4 172 aa-3.08□□□□□ -2.9
RNU6-239P-201ENST00000390990 S100A6P06703 90 aa-3.08□□□□□ -2.9
RNU6-239P-201ENST00000390990 SMIM6P0DI80 62 aa-3.08□□□□□ -2.9
RNU6-239P-201ENST00000390990 TMED2Q15363 201 aa-3.08□□□□□ -2.9
RNU6-239P-201ENST00000390990 CNPY4Q8N129 248 aa-3.08□□□□□ -2.9
RNU6-239P-201ENST00000390990 LLPHQ9BRT6 129 aaKnown RBP-3.08□□□□□ -2.9
RNU6-239P-201ENST00000390990 LRRC37A2A6NM11 1700 aa-3.08□□□□□ -2.9
RNU6-239P-201ENST00000390990 DNAH1Q9P2D7 4330 aa-3.08□□□□□ -2.9
RNU6-239P-201ENST00000390990 HSD17B12Q53GQ0 312 aa-3.09□□□□□ -2.9
RNU6-239P-201ENST00000390990 METTL1Q9UBP6 276 aaKnown RBP-3.09□□□□□ -2.9
RNU6-239P-201ENST00000390990 FER1L6Q2WGJ9 1857 aa-3.09□□□□□ -2.9
RNU6-239P-201ENST00000390990 MUC22E2RYF6 1773 aaPredicted RBP-3.1□□□□□ -2.91
RNU6-239P-201ENST00000390990 RIF1Q5UIP0 2472 aaKnown RBP-3.1□□□□□ -2.91
RNU6-239P-201ENST00000390990 DEFA5Q01523 94 aa-3.1□□□□□ -2.91
RNU6-239P-201ENST00000390990 PRAP1Q96NZ9 151 aa-3.1□□□□□ -2.91
RNU6-239P-201ENST00000390990 SACSQ9NZJ4 4579 aa-3.1□□□□□ -2.91
RNU6-239P-201ENST00000390990 PKD1L2Q7Z442 2459 aa-3.11□□□□□ -2.91
RNU6-239P-201ENST00000390990 M0QZK8 103 aa-3.11□□□□□ -2.91
RNU6-239P-201ENST00000390990 TPM3P06753 285 aa-3.11□□□□□ -2.91
RNU6-239P-201ENST00000390990 S100A11P31949 105 aa-3.11□□□□□ -2.91
RNU6-239P-201ENST00000390990 SPA17Q15506 151 aa-3.11□□□□□ -2.91
RNU6-239P-201ENST00000390990 C9orf62Q8N4C0 152 aa-3.11□□□□□ -2.91
RNU6-239P-201ENST00000390990 MAFIPQ8WZ33 124 aa-3.11□□□□□ -2.91
RNU6-239P-201ENST00000390990 APLNQ9ULZ1 77 aa-3.11□□□□□ -2.91
RNU6-239P-201ENST00000390990 UFC1Q9Y3C8 167 aa-3.11□□□□□ -2.91
RNU6-239P-201ENST00000390990 TRBV7-6A0A0J9YX20 115 aa-3.12□□□□□ -2.91
RNU6-239P-201ENST00000390990 ATG12O94817 140 aa-3.12□□□□□ -2.91
RNU6-239P-201ENST00000390990 C9orf116Q5BN46 136 aaPredicted RBP-3.12□□□□□ -2.91
RNU6-239P-201ENST00000390990 SNX29P2Q8IUI4 249 aa-3.12□□□□□ -2.91
RNU6-239P-201ENST00000390990 SLC35B3Q9H1N7 401 aa-3.12□□□□□ -2.91
RNU6-239P-201ENST00000390990 CBLN4Q9NTU7 201 aa-3.12□□□□□ -2.91
RNU6-239P-201ENST00000390990 CCDC179H3BU77 68 aa-3.13□□□□□ -2.91
RNU6-239P-201ENST00000390990 UQCRQO14949 82 aa-3.13□□□□□ -2.91
RNU6-239P-201ENST00000390990 PITX3O75364 302 aa-3.13□□□□□ -2.91
RNU6-239P-201ENST00000390990 SLC25A5P05141 298 aaKnown RBP-3.13□□□□□ -2.91
RNU6-239P-201ENST00000390990 UBE2D1P51668 147 aa-3.13□□□□□ -2.91
RNU6-239P-201ENST00000390990 CEBPGP53567 150 aa-3.13□□□□□ -2.91
RNU6-239P-201ENST00000390990 CCL7P80098 99 aa-3.13□□□□□ -2.91
RNU6-239P-201ENST00000390990 Q6JHZ5 121 aa-3.13□□□□□ -2.91
RNU6-239P-201ENST00000390990 ZNF236Q9UL36 1845 aa-3.14□□□□□ -2.91
RNU6-239P-201ENST00000390990 TROQ12816 1431 aaPredicted RBP-3.14□□□□□ -2.91
RNU6-239P-201ENST00000390990 RELNP78509 3460 aa-3.14□□□□□ -2.91
RNU6-239P-201ENST00000390990 ADAMTS12P58397 1594 aa-3.14□□□□□ -2.91
RNU6-239P-201ENST00000390990 REV3LO60673 3130 aa-3.15□□□□□ -2.91
RNU6-239P-201ENST00000390990 NOP16Q9Y3C1 178 aaKnown RBP-3.15□□□□□ -2.91
RNU6-239P-201ENST00000390990 COL4A6Q14031 1691 aa-3.15□□□□□ -2.91
RNU6-239P-201ENST00000390990 CAMSAP1Q5T5Y3 1602 aa-3.15□□□□□ -2.91
RNU6-239P-201ENST00000390990 CCL18P55774 89 aa-3.16□□□□□ -2.92
RNU6-239P-201ENST00000390990 MT1HP80294 61 aa-3.16□□□□□ -2.92
RNU6-239P-201ENST00000390990 SMIM4Q8WVI0 70 aa-3.16□□□□□ -2.92
RNU6-239P-201ENST00000390990 C10orf82Q8WW14 230 aa-3.16□□□□□ -2.92
RNU6-239P-201ENST00000390990 GINS3Q9BRX5 216 aa-3.16□□□□□ -2.92
RNU6-239P-201ENST00000390990 LRRC37A3O60309 1634 aa-3.16□□□□□ -2.92
RNU6-239P-201ENST00000390990 PTPN23Q9H3S7 1636 aa-3.16□□□□□ -2.92
RNU6-239P-201ENST00000390990 MED23Q9ULK4 1368 aa-3.16□□□□□ -2.92
RNU6-239P-201ENST00000390990 H3BNG1 76 aa-3.17□□□□□ -2.92
RNU6-239P-201ENST00000390990 HIST1H1BP16401 226 aaKnown RBP-3.17□□□□□ -2.92
RNU6-239P-201ENST00000390990 TPM4P67936 248 aa-3.17□□□□□ -2.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms