RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 IGHV3-53P01767 116 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 CRPP02741 224 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 HRES1P13985 223 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 DSCR4P56555 118 aaPredicted RBP1.01□□□□□ -2.25
TRAV40-201ENST00000390467 GNG11P61952 73 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 ELOBQ15370 118 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 PMCHL1Q16048 86 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 MPV17LQ2QL34 196 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 C9orf116Q5BN46 136 aaPredicted RBP1.01□□□□□ -2.25
TRAV40-201ENST00000390467 C20orf166-AS1Q96NR2 134 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 NXT2Q9NPJ8 142 aaKnown RBP1.01□□□□□ -2.25
TRAV40-201ENST00000390467 SPAG17Q6Q759 2223 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 MAP2P11137 1827 aaKnown RBP1.01□□□□□ -2.25
TRAV40-201ENST00000390467 DOCK2Q92608 1830 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 LAMB4A4D0S4 1761 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 SCN11AQ9UI33 1791 aa1.01□□□□□ -2.25
TRAV40-201ENST00000390467 COL5A3P25940 1745 aaPredicted RBP1.01□□□□□ -2.25
TRAV40-201ENST00000390467 SUPT6HQ7KZ85 1726 aaKnown RBP1.01□□□□□ -2.25
TRAV40-201ENST00000390467 PPRC1Q5VV67 1664 aaKnown RBP1□□□□□ -2.25
TRAV40-201ENST00000390467 IQGAP3Q86VI3 1631 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 PTPN23Q9H3S7 1636 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 SETBP1Q9Y6X0 1596 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 CUX1P39880 1505 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 DISP1Q96F81 1524 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 DUOX2Q9NRD8 1548 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 ARHGEF12Q9NZN5 1544 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 ABCA4P78363 2273 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 PRXQ9BXM0 1461 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 ARFGEF3Q5TH69 2177 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 PI4KAP42356 2102 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 ARHGAP32A7KAX9 2087 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 IGKV1D-42A0A075B6H8 117 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 IGLV10-54A0A075B6I4 117 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 TRAV13-2A0A0B4J235 113 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 A0A1B0GU33 70 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 KANTRA0A1W2PQU2 76 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 HCG22E2RYF7 251 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 NDUFC1O43677 76 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 BCE1O60756 84 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 IGLV7-43P04211 117 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 ASAH2BP0C7U1 165 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 BAALC-AS2P0C853 105 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 SMIM13P0DJ93 91 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 CXCL8P10145 99 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 MGST1P10620 155 aaKnown RBP1□□□□□ -2.25
TRAV40-201ENST00000390467 EFNA4P52798 201 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 SNRPFP62306 86 aaKnown RBP1□□□□□ -2.25
TRAV40-201ENST00000390467 MIR22HGQ0VDD5 57 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 CFAP126Q5VTH2 177 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 SLC48A1Q6P1K1 146 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 ZCCHC23Q6ZST2 131 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 ZNF826PQ6ZT77 177 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 LYPD6Q86Y78 171 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 Q8NAQ8 132 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 CYP4F30PQ9H0H9 118 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 C14orf132Q9NPU4 83 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 CDC42SE1Q9NRR8 79 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 MINOS1-NBL1R4GNA1 71 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 PLXNA1Q9UIW2 1896 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 COL24A1Q17RW2 1714 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 SHANK3Q9BYB0 1731 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 PEAK1Q9H792 1746 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 TRPM3Q9HCF6 1732 aaPredicted RBP1□□□□□ -2.25
TRAV40-201ENST00000390467 KIF1AQ12756 1690 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 USP54Q70EL1 1684 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 TOPAZ1Q8N9V7 1692 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 UNC13CQ8NB66 2214 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 KIF14Q15058 1648 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 CFAP74Q9C0B2 1584 aa1□□□□□ -2.25
TRAV40-201ENST00000390467 NRXN1Q9ULB1 1477 aa0.99□□□□□ -2.25
TRAV40-201ENST00000390467 TANC1Q9C0D5 1861 aa0.99□□□□□ -2.25
TRAV40-201ENST00000390467 KDM3BQ7LBC6 1761 aa0.99□□□□□ -2.25
TRAV40-201ENST00000390467 MED12Q93074 2177 aa0.99□□□□□ -2.25
TRAV40-201ENST00000390467 MYO5CQ9NQX4 1742 aa0.99□□□□□ -2.25
TRAV40-201ENST00000390467 IGHV3-64A0A075B6Q5 118 aa0.99□□□□□ -2.25
TRAV40-201ENST00000390467 TRBV7-1A0A0A6YYK4 115 aa0.99□□□□□ -2.25
TRAV40-201ENST00000390467 TRBV10-3A0A0K0K1G6 114 aa0.99□□□□□ -2.25
TRAV40-201ENST00000390467 CXorf51AA0A1B0GTR3 108 aa0.99□□□□□ -2.25
TRAV40-201ENST00000390467 CRYM-AS1A6NIL9 109 aa0.99□□□□□ -2.25
TRAV40-201ENST00000390467 A6NIN4 97 aa0.99□□□□□ -2.25
TRAV40-201ENST00000390467 UMAD1C9J7I0 102 aa0.99□□□□□ -2.25
TRAV40-201ENST00000390467 F2Z2F3 143 aa0.99□□□□□ -2.25
TRAV40-201ENST00000390467 ACYP1P07311 99 aa0.99□□□□□ -2.25
TRAV40-201ENST00000390467 SFTA3P0C7M3 94 aa0.99□□□□□ -2.25
TRAV40-201ENST00000390467 MIFP14174 115 aa0.99□□□□□ -2.25
TRAV40-201ENST00000390467 KLKP1Q107X0 134 aa0.99□□□□□ -2.25
TRAV40-201ENST00000390467 DEFB113Q30KQ7 82 aa0.99□□□□□ -2.25
TRAV40-201ENST00000390467 ZNF791Q3KP31 576 aaPredicted RBP0.99□□□□□ -2.25
TRAV40-201ENST00000390467 DEFB134Q4QY38 66 aa0.99□□□□□ -2.25
TRAV40-201ENST00000390467 KRTAP26-1Q6PEX3 210 aa0.99□□□□□ -2.25
TRAV40-201ENST00000390467 CASC2Q6XLA1 102 aa0.99□□□□□ -2.25
TRAV40-201ENST00000390467 CYP2G1PQ6ZSU1 146 aa0.99□□□□□ -2.25
TRAV40-201ENST00000390467 VMO1Q7Z5L0 202 aa0.99□□□□□ -2.25
TRAV40-201ENST00000390467 LINC00643Q86TS7 51 aa0.99□□□□□ -2.25
TRAV40-201ENST00000390467 TET1Q8NFU7 2136 aa0.99□□□□□ -2.25
TRAV40-201ENST00000390467 BPESC1Q9GZL8 116 aa0.99□□□□□ -2.25
TRAV40-201ENST00000390467 TARBP1Q13395 1621 aaKnown RBP0.99□□□□□ -2.25
TRAV40-201ENST00000390467 DIP2CQ9Y2E4 1556 aa0.99□□□□□ -2.25
TRAV40-201ENST00000390467 EFCAB5A4FU69 1503 aa0.99□□□□□ -2.25
TRAV40-201ENST00000390467 ABCC1P33527 1531 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms