RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 KLK12Q9UKR0 248 aa10.48□□□□□ -0.73
VCX3A-201ENST00000381089 M0R036 132 aa10.47□□□□□ -0.73
VCX3A-201ENST00000381089 FAM162BQ5T6X4 162 aa10.47□□□□□ -0.73
VCX3A-201ENST00000381089 COMMD7Q86VX2 200 aa10.47□□□□□ -0.73
VCX3A-201ENST00000381089 UBE2WQ96B02 151 aa10.47□□□□□ -0.73
VCX3A-201ENST00000381089 MLST8Q9BVC4 326 aa10.47□□□□□ -0.73
VCX3A-201ENST00000381089 SAMD10Q9BYL1 202 aa10.47□□□□□ -0.73
VCX3A-201ENST00000381089 UBR4Q5T4S7 5183 aa10.47□□□□□ -0.73
VCX3A-201ENST00000381089 FAT3Q8TDW7 4589 aa10.46□□□□□ -0.73
VCX3A-201ENST00000381089 ZNF727A8MUV8 499 aa10.46□□□□□ -0.73
VCX3A-201ENST00000381089 Q0VG73 95 aa10.46□□□□□ -0.73
VCX3A-201ENST00000381089 COX8CQ7Z4L0 72 aa10.46□□□□□ -0.73
VCX3A-201ENST00000381089 C14orf178Q8N769 122 aaPredicted RBP10.46□□□□□ -0.73
VCX3A-201ENST00000381089 IL36BQ9NZH7 164 aa10.46□□□□□ -0.73
VCX3A-201ENST00000381089 TMSB15BA0A087X1C1 80 aa10.45□□□□□ -0.74
VCX3A-201ENST00000381089 FABP5P3A8MUU1 101 aa10.45□□□□□ -0.74
VCX3A-201ENST00000381089 NDUFS6O75380 124 aaKnown RBP10.45□□□□□ -0.74
VCX3A-201ENST00000381089 KRTAP10-4P60372 401 aaPredicted RBP10.45□□□□□ -0.74
VCX3A-201ENST00000381089 DMRTA1Q5VZB9 504 aa10.45□□□□□ -0.74
VCX3A-201ENST00000381089 IGKV3D-20A0A0C4DH25 116 aa10.44□□□□□ -0.74
VCX3A-201ENST00000381089 RPL37AP61513 92 aaKnown RBP10.44□□□□□ -0.74
VCX3A-201ENST00000381089 FAM74A4Q5TZK3 123 aa10.44□□□□□ -0.74
VCX3A-201ENST00000381089 UFSP1Q6NVU6 142 aa10.44□□□□□ -0.74
VCX3A-201ENST00000381089 C1orf43Q9BWL3 253 aa10.44□□□□□ -0.74
VCX3A-201ENST00000381089 SMDT1Q9H4I9 107 aa10.44□□□□□ -0.74
VCX3A-201ENST00000381089 B4DEV8 164 aa10.43□□□□□ -0.74
VCX3A-201ENST00000381089 H3BVH4 76 aa10.43□□□□□ -0.74
VCX3A-201ENST00000381089 K7EN84 100 aa10.43□□□□□ -0.74
VCX3A-201ENST00000381089 RPL19P84098 196 aaKnown RBP10.43□□□□□ -0.74
VCX3A-201ENST00000381089 OCC1Q8TAD7 63 aa10.43□□□□□ -0.74
VCX3A-201ENST00000381089 JPT2Q9H910 190 aa10.43□□□□□ -0.74
VCX3A-201ENST00000381089 Q9UF83 564 aa10.43□□□□□ -0.74
VCX3A-201ENST00000381089 GRIFINA4D1Z8 144 aa10.42□□□□□ -0.74
VCX3A-201ENST00000381089 LINC00862A6NCI5 91 aa10.42□□□□□ -0.74
VCX3A-201ENST00000381089 CRPP02741 224 aa10.42□□□□□ -0.74
VCX3A-201ENST00000381089 RPL36AP83881 106 aaKnown RBP10.42□□□□□ -0.74
VCX3A-201ENST00000381089 ATRAIDQ6UW56 229 aa10.42□□□□□ -0.74
VCX3A-201ENST00000381089 RPL36ALQ969Q0 106 aaKnown RBP10.42□□□□□ -0.74
VCX3A-201ENST00000381089 DAZAP1Q96EP5 407 aaKnown RBP10.42□□□□□ -0.74
VCX3A-201ENST00000381089 SMIM12Q96EX1 92 aa10.42□□□□□ -0.74
VCX3A-201ENST00000381089 DNAJC30Q96LL9 226 aa10.42□□□□□ -0.74
VCX3A-201ENST00000381089 TRBV10-1A0A0K0K1A3 114 aa10.41□□□□□ -0.74
VCX3A-201ENST00000381089 KRBOX1C9JBD0 128 aa10.41□□□□□ -0.74
VCX3A-201ENST00000381089 TMEM262E9PQX1 116 aa10.41□□□□□ -0.74
VCX3A-201ENST00000381089 PHLDA3Q9Y5J5 127 aa10.41□□□□□ -0.74
VCX3A-201ENST00000381089 ARMS2P0C7Q2 107 aa10.4□□□□□ -0.74
VCX3A-201ENST00000381089 ADIRFQ15847 76 aa10.4□□□□□ -0.74
VCX3A-201ENST00000381089 TMEM241Q24JQ0 296 aa10.4□□□□□ -0.74
VCX3A-201ENST00000381089 LINC01559Q495D7 138 aa10.4□□□□□ -0.74
VCX3A-201ENST00000381089 FAM74A3Q4VXF1 159 aa10.4□□□□□ -0.74
VCX3A-201ENST00000381089 UQCC3Q6UW78 93 aa10.4□□□□□ -0.74
VCX3A-201ENST00000381089 LINC01551Q86U37 167 aa10.4□□□□□ -0.74
VCX3A-201ENST00000381089 RNASE7Q9H1E1 156 aaKnown RBP10.4□□□□□ -0.74
VCX3A-201ENST00000381089 BIN3Q9NQY0 253 aa10.4□□□□□ -0.74
VCX3A-201ENST00000381089 A0A087WWL8 130 aa10.39□□□□□ -0.75
VCX3A-201ENST00000381089 C19orf71A6NCJ1 209 aa10.39□□□□□ -0.75
VCX3A-201ENST00000381089 P01737 135 aa10.39□□□□□ -0.75
VCX3A-201ENST00000381089 PKIAP61925 76 aa10.39□□□□□ -0.75
VCX3A-201ENST00000381089 DNLZQ5SXM8 178 aa10.39□□□□□ -0.75
VCX3A-201ENST00000381089 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.39□□□□□ -0.75
VCX3A-201ENST00000381089 OR2D3Q8NGH3 330 aa10.39□□□□□ -0.75
VCX3A-201ENST00000381089 SFRP2Q96HF1 295 aa10.39□□□□□ -0.75
VCX3A-201ENST00000381089 NAT8Q9UHE5 227 aa10.39□□□□□ -0.75
VCX3A-201ENST00000381089 TRBV7-3A0A075B6L6 115 aa10.38□□□□□ -0.75
VCX3A-201ENST00000381089 GZMBP10144 247 aa10.38□□□□□ -0.75
VCX3A-201ENST00000381089 RPL23P62829 140 aaKnown RBP10.38□□□□□ -0.75
VCX3A-201ENST00000381089 NUDT10Q8NFP7 164 aa10.38□□□□□ -0.75
VCX3A-201ENST00000381089 NUDT11Q96G61 164 aa10.38□□□□□ -0.75
VCX3A-201ENST00000381089 PKHD1L1Q86WI1 4243 aa10.38□□□□□ -0.75
VCX3A-201ENST00000381089 M0R381 172 aa10.37□□□□□ -0.75
VCX3A-201ENST00000381089 UBE2D3P61077 147 aa10.37□□□□□ -0.75
VCX3A-201ENST00000381089 UBE2D2P62837 147 aa10.37□□□□□ -0.75
VCX3A-201ENST00000381089 ZFP82Q8N141 532 aa10.37□□□□□ -0.75
VCX3A-201ENST00000381089 C15orf54Q8N8G6 183 aa10.37□□□□□ -0.75
VCX3A-201ENST00000381089 RPP21Q9H633 154 aaKnown RBP10.37□□□□□ -0.75
VCX3A-201ENST00000381089 TMEM218A2RU14 115 aa10.36□□□□□ -0.75
VCX3A-201ENST00000381089 F8W036 122 aa10.36□□□□□ -0.75
VCX3A-201ENST00000381089 HLA-DQA1P01909 254 aa10.36□□□□□ -0.75
VCX3A-201ENST00000381089 ANGP03950 147 aaKnown RBP10.36□□□□□ -0.75
VCX3A-201ENST00000381089 ADCYAP1P18509 176 aa10.36□□□□□ -0.75
VCX3A-201ENST00000381089 DGAT2L7PQ6IED9 249 aa10.36□□□□□ -0.75
VCX3A-201ENST00000381089 ISOC2Q96AB3 205 aa10.36□□□□□ -0.75
VCX3A-201ENST00000381089 TRBV6-8A0A0A6YYG3 113 aa10.35□□□□□ -0.75
VCX3A-201ENST00000381089 USP17L23D6RBM5 183 aa10.35□□□□□ -0.75
VCX3A-201ENST00000381089 GATCO43716 136 aaKnown RBP10.35□□□□□ -0.75
VCX3A-201ENST00000381089 MIAQ16674 131 aa10.35□□□□□ -0.75
VCX3A-201ENST00000381089 ENHOQ6UWT2 76 aa10.35□□□□□ -0.75
VCX3A-201ENST00000381089 TPPP3Q9BW30 176 aa10.35□□□□□ -0.75
VCX3A-201ENST00000381089 MUC21A0A0G2JKD1 596 aa10.34□□□□□ -0.75
VCX3A-201ENST00000381089 MUC21A0A140T8X8 626 aa10.34□□□□□ -0.75
VCX3A-201ENST00000381089 RPS20P60866 119 aaKnown RBP10.34□□□□□ -0.75
VCX3A-201ENST00000381089 FAM231DQ6ZW35 169 aa10.34□□□□□ -0.75
VCX3A-201ENST00000381089 OR10G8Q8NGN5 311 aa10.34□□□□□ -0.75
VCX3A-201ENST00000381089 RAB4BP61018 213 aa10.33□□□□□ -0.76
VCX3A-201ENST00000381089 SSTP61278 116 aa10.33□□□□□ -0.76
VCX3A-201ENST00000381089 MPV17L2Q567V2 206 aa10.33□□□□□ -0.76
VCX3A-201ENST00000381089 CHCHD5Q9BSY4 110 aa10.33□□□□□ -0.76
VCX3A-201ENST00000381089 XKRY2A2RUG3 117 aa10.32□□□□□ -0.76
VCX3A-201ENST00000381089 CXCL1P09341 107 aa10.32□□□□□ -0.76
VCX3A-201ENST00000381089 ZNF56Q15929 161 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms