RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 F5H697 171 aa6.31□□□□□ -1.4
HMGN1-202ENST00000380747 SMIM17P0DL12 118 aa6.31□□□□□ -1.4
HMGN1-202ENST00000380747 RAB14P61106 215 aa6.31□□□□□ -1.4
HMGN1-202ENST00000380747 CACNG7P62955 275 aa6.31□□□□□ -1.4
HMGN1-202ENST00000380747 LYZL1Q6UWQ5 148 aa6.31□□□□□ -1.4
HMGN1-202ENST00000380747 WFDC10BQ8IUB3 73 aa6.31□□□□□ -1.4
HMGN1-202ENST00000380747 C6orf223Q8N319 242 aa6.31□□□□□ -1.4
HMGN1-202ENST00000380747 AP1S3Q96PC3 154 aa6.31□□□□□ -1.4
HMGN1-202ENST00000380747 KRTAP1-5Q9BYS1 174 aa6.31□□□□□ -1.4
HMGN1-202ENST00000380747 Q9UF83 564 aa6.31□□□□□ -1.4
HMGN1-202ENST00000380747 LY96Q9Y6Y9 160 aa6.31□□□□□ -1.4
HMGN1-202ENST00000380747 TRAV8-6A0A0B4J262 113 aa6.3□□□□□ -1.4
HMGN1-202ENST00000380747 C9JQL5 133 aa6.3□□□□□ -1.4
HMGN1-202ENST00000380747 MGPP08493 103 aa6.3□□□□□ -1.4
HMGN1-202ENST00000380747 TIRAPP58753 221 aa6.3□□□□□ -1.4
HMGN1-202ENST00000380747 ERVFC1-1P60608 527 aa6.3□□□□□ -1.4
HMGN1-202ENST00000380747 RAB4BP61018 213 aa6.3□□□□□ -1.4
HMGN1-202ENST00000380747 OR10J3Q5JRS4 329 aa6.3□□□□□ -1.4
HMGN1-202ENST00000380747 KRTAP4-5Q9BYR2 181 aa6.3□□□□□ -1.4
HMGN1-202ENST00000380747 GTSF1LQ9H1H1 148 aa6.3□□□□□ -1.4
HMGN1-202ENST00000380747 MSRB1Q9NZV6 116 aa6.3□□□□□ -1.4
HMGN1-202ENST00000380747 TRAV9-2A0A087WT02 112 aa6.29□□□□□ -1.4
HMGN1-202ENST00000380747 LINC00694P0DN24 101 aa6.29□□□□□ -1.4
HMGN1-202ENST00000380747 EVI2AP22794 236 aa6.29□□□□□ -1.4
HMGN1-202ENST00000380747 RPL36AP83881 106 aaKnown RBP6.29□□□□□ -1.4
HMGN1-202ENST00000380747 TWIST1Q15672 202 aa6.29□□□□□ -1.4
HMGN1-202ENST00000380747 TMEM241Q24JQ0 296 aa6.29□□□□□ -1.4
HMGN1-202ENST00000380747 FAM74A3Q4VXF1 159 aa6.29□□□□□ -1.4
HMGN1-202ENST00000380747 FAM231DQ6ZW35 169 aa6.29□□□□□ -1.4
HMGN1-202ENST00000380747 LINC01551Q86U37 167 aa6.29□□□□□ -1.4
HMGN1-202ENST00000380747 RPL36ALQ969Q0 106 aaKnown RBP6.29□□□□□ -1.4
HMGN1-202ENST00000380747 IGHV3-38A0A0C4DH36 116 aa6.28□□□□□ -1.4
HMGN1-202ENST00000380747 TRBV10-1A0A0K0K1A3 114 aa6.28□□□□□ -1.4
HMGN1-202ENST00000380747 A8MWL6 223 aa6.28□□□□□ -1.4
HMGN1-202ENST00000380747 TRGC1P0CF51 173 aa6.28□□□□□ -1.4
HMGN1-202ENST00000380747 NTF3P20783 257 aa6.28□□□□□ -1.4
HMGN1-202ENST00000380747 CTRLP40313 264 aa6.28□□□□□ -1.4
HMGN1-202ENST00000380747 ADIRFQ15847 76 aa6.28□□□□□ -1.4
HMGN1-202ENST00000380747 LELP1Q5T871 98 aa6.28□□□□□ -1.4
HMGN1-202ENST00000380747 C15orf54Q8N8G6 183 aa6.28□□□□□ -1.4
HMGN1-202ENST00000380747 PGLYRP4Q96LB8 373 aa6.28□□□□□ -1.4
HMGN1-202ENST00000380747 NAT8Q9UHE5 227 aa6.28□□□□□ -1.4
HMGN1-202ENST00000380747 KIF25-AS1Q9Y6Z4 181 aa6.28□□□□□ -1.4
HMGN1-202ENST00000380747 B5MCH6 92 aa6.27□□□□□ -1.41
HMGN1-202ENST00000380747 IGHV3-30P01768 117 aa6.27□□□□□ -1.41
HMGN1-202ENST00000380747 IGHV3-33P01772 117 aa6.27□□□□□ -1.41
HMGN1-202ENST00000380747 DNAH10OSP0CZ25 163 aa6.27□□□□□ -1.41
HMGN1-202ENST00000380747 IGHV3-30-3P0DP02 117 aa6.27□□□□□ -1.41
HMGN1-202ENST00000380747 IGHV3-30-5P0DP03 117 aa6.27□□□□□ -1.41
HMGN1-202ENST00000380747 LINC00315P59091 139 aa6.27□□□□□ -1.41
HMGN1-202ENST00000380747 UBE2D3P61077 147 aa6.27□□□□□ -1.41
HMGN1-202ENST00000380747 RPL23P62829 140 aaKnown RBP6.27□□□□□ -1.41
HMGN1-202ENST00000380747 UBE2D2P62837 147 aa6.27□□□□□ -1.41
HMGN1-202ENST00000380747 SUMO4Q6EEV6 95 aa6.27□□□□□ -1.41
HMGN1-202ENST00000380747 WDR73Q6P4I2 378 aa6.27□□□□□ -1.41
HMGN1-202ENST00000380747 GTSF1Q8WW33 167 aa6.27□□□□□ -1.41
HMGN1-202ENST00000380747 ISOC2Q96AB3 205 aa6.27□□□□□ -1.41
HMGN1-202ENST00000380747 C1orf43Q9BWL3 253 aa6.27□□□□□ -1.41
HMGN1-202ENST00000380747 SMDT1Q9H4I9 107 aa6.27□□□□□ -1.41
HMGN1-202ENST00000380747 OSTCQ9NRP0 149 aa6.27□□□□□ -1.41
HMGN1-202ENST00000380747 TRBV7-3A0A075B6L6 115 aa6.26□□□□□ -1.41
HMGN1-202ENST00000380747 A0A087WWC5 75 aa6.26□□□□□ -1.41
HMGN1-202ENST00000380747 SMIM15Q7Z3B0 74 aa6.26□□□□□ -1.41
HMGN1-202ENST00000380747 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.26□□□□□ -1.41
HMGN1-202ENST00000380747 NEXN-AS1Q8NBZ9 246 aa6.26□□□□□ -1.41
HMGN1-202ENST00000380747 SVIPQ8NHG7 77 aa6.26□□□□□ -1.41
HMGN1-202ENST00000380747 BORCS7Q96B45 105 aa6.26□□□□□ -1.41
HMGN1-202ENST00000380747 DPH3P1Q9H4G8 78 aa6.26□□□□□ -1.41
HMGN1-202ENST00000380747 TNFRSF18Q9Y5U5 241 aa6.26□□□□□ -1.41
HMGN1-202ENST00000380747 H7C1H1 209 aa6.25□□□□□ -1.41
HMGN1-202ENST00000380747 BTF3P20290 206 aaKnown RBP6.25□□□□□ -1.41
HMGN1-202ENST00000380747 LINC01556Q5JQF7 62 aa6.25□□□□□ -1.41
HMGN1-202ENST00000380747 CLLU1Q5K131 121 aa6.25□□□□□ -1.41
HMGN1-202ENST00000380747 C10orf126Q8N4M7 172 aa6.25□□□□□ -1.41
HMGN1-202ENST00000380747 OR10G8Q8NGN5 311 aa6.25□□□□□ -1.41
HMGN1-202ENST00000380747 TSKUQ8WUA8 353 aa6.25□□□□□ -1.41
HMGN1-202ENST00000380747 CNFNQ9BYD5 112 aa6.25□□□□□ -1.41
HMGN1-202ENST00000380747 V9GYV3 84 aa6.25□□□□□ -1.41
HMGN1-202ENST00000380747 DMBT1Q9UGM3 2413 aaPredicted RBP6.25□□□□□ -1.41
HMGN1-202ENST00000380747 HIGD1CA8MV81 97 aa6.24□□□□□ -1.41
HMGN1-202ENST00000380747 K7EP13 123 aa6.24□□□□□ -1.41
HMGN1-202ENST00000380747 M0QY20 66 aa6.24□□□□□ -1.41
HMGN1-202ENST00000380747 CDK2AP2O75956 126 aa6.24□□□□□ -1.41
HMGN1-202ENST00000380747 IFITM2Q01629 132 aa6.24□□□□□ -1.41
HMGN1-202ENST00000380747 RASL11AQ6T310 242 aa6.24□□□□□ -1.41
HMGN1-202ENST00000380747 NFE4Q86UQ8 179 aa6.24□□□□□ -1.41
HMGN1-202ENST00000380747 DNAJC30Q96LL9 226 aa6.24□□□□□ -1.41
HMGN1-202ENST00000380747 GFRA4Q9GZZ7 299 aa6.24□□□□□ -1.41
HMGN1-202ENST00000380747 FOXA3P55318 350 aaPredicted RBP6.23□□□□□ -1.41
HMGN1-202ENST00000380747 Q9HAA7 133 aa6.23□□□□□ -1.41
HMGN1-202ENST00000380747 URGCP-MRPS24S4R325 110 aa6.23□□□□□ -1.41
HMGN1-202ENST00000380747 TRBV6-8A0A0A6YYG3 113 aa6.22□□□□□ -1.41
HMGN1-202ENST00000380747 TRAV26-2A0A0B4J265 109 aa6.22□□□□□ -1.41
HMGN1-202ENST00000380747 A0A1B0GUT8 65 aa6.22□□□□□ -1.41
HMGN1-202ENST00000380747 FAM231BA6NCW3 169 aa6.22□□□□□ -1.41
HMGN1-202ENST00000380747 IBA57-AS1B1ANH7 110 aa6.22□□□□□ -1.41
HMGN1-202ENST00000380747 TMEM262E9PQX1 116 aa6.22□□□□□ -1.41
HMGN1-202ENST00000380747 RIGQ13278 110 aa6.22□□□□□ -1.41
HMGN1-202ENST00000380747 KRTAP19-4Q3LI73 84 aa6.22□□□□□ -1.41
HMGN1-202ENST00000380747 KCNIP4Q6PIL6 250 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms