RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 OPRPNQ99935 248 aaPredicted RBP14.76□□□□□ -0.05
EBF1-202ENST00000380654 ZNF815PA8K554 130 aa14.76□□□□□ -0.05
EBF1-202ENST00000380654 RIPPLY3P57055 190 aa14.75□□□□□ -0.05
EBF1-202ENST00000380654 KHDC1LQ5JSQ8 128 aa14.75□□□□□ -0.05
EBF1-202ENST00000380654 ITPR3Q14573 2671 aa14.74□□□□□ -0.05
EBF1-202ENST00000380654 IGHV3-73A0A0B4J1V6 119 aa14.74□□□□□ -0.05
EBF1-202ENST00000380654 PCP4P48539 62 aa14.74□□□□□ -0.05
EBF1-202ENST00000380654 TIMM17AQ99595 171 aa14.74□□□□□ -0.05
EBF1-202ENST00000380654 RBMY1BA6NDE4 496 aaKnown RBP14.74□□□□□ -0.05
EBF1-202ENST00000380654 RBMY1EA6NEQ0 496 aaKnown RBP14.74□□□□□ -0.05
EBF1-202ENST00000380654 IGLL5B9A064 214 aa14.74□□□□□ -0.05
EBF1-202ENST00000380654 RBMY1DP0C7P1 496 aaKnown RBP14.74□□□□□ -0.05
EBF1-202ENST00000380654 OR5A1Q8NGJ0 315 aa14.74□□□□□ -0.05
EBF1-202ENST00000380654 ZNRF2Q8NHG8 242 aa14.74□□□□□ -0.05
EBF1-202ENST00000380654 TMEM141Q96I45 108 aa14.74□□□□□ -0.05
EBF1-202ENST00000380654 P0DMU3 169 aa14.73□□□□□ -0.05
EBF1-202ENST00000380654 FAM231AP0DMU4 169 aa14.73□□□□□ -0.05
EBF1-202ENST00000380654 FAM231CP0DMU5 169 aa14.73□□□□□ -0.05
EBF1-202ENST00000380654 SCGB2A2Q13296 93 aa14.73□□□□□ -0.05
EBF1-202ENST00000380654 TMEM61Q8N0U2 210 aa14.73□□□□□ -0.05
EBF1-202ENST00000380654 TRPT1Q86TN4 253 aaKnown RBP14.72□□□□□ -0.05
EBF1-202ENST00000380654 TRGV11A0A075B6L2 103 aa14.72□□□□□ -0.05
EBF1-202ENST00000380654 PROK1P58294 105 aa14.72□□□□□ -0.05
EBF1-202ENST00000380654 SCGB1D4Q6XE38 83 aa14.72□□□□□ -0.05
EBF1-202ENST00000380654 VPS25Q9BRG1 176 aa14.72□□□□□ -0.05
EBF1-202ENST00000380654 LINC01619G3V211 115 aa14.71□□□□□ -0.05
EBF1-202ENST00000380654 Q8N2B8 174 aa14.71□□□□□ -0.05
EBF1-202ENST00000380654 H3BMM0 161 aa14.71□□□□□ -0.05
EBF1-202ENST00000380654 TMEM170BQ5T4T1 132 aa14.71□□□□□ -0.05
EBF1-202ENST00000380654 K7ERU9 68 aa14.7□□□□□ -0.06
EBF1-202ENST00000380654 TSPEAR-AS2P59090 65 aa14.7□□□□□ -0.06
EBF1-202ENST00000380654 KRTAP1-3Q8IUG1 177 aa14.7□□□□□ -0.06
EBF1-202ENST00000380654 DLX4Q92988 240 aaPredicted RBP14.7□□□□□ -0.06
EBF1-202ENST00000380654 ZNF479Q96JC4 524 aa14.7□□□□□ -0.06
EBF1-202ENST00000380654 NACAE9PAV3 2078 aa14.7□□□□□ -0.06
EBF1-202ENST00000380654 LINC01549A6NIU2 74 aa14.7□□□□□ -0.06
EBF1-202ENST00000380654 NSUN5P1Q3KNT7 163 aa14.7□□□□□ -0.06
EBF1-202ENST00000380654 WNK1Q9H4A3 2382 aa14.69□□□□□ -0.06
EBF1-202ENST00000380654 Q9UF83 564 aa14.68□□□□□ -0.06
EBF1-202ENST00000380654 I3L3M4 83 aa14.67□□□□□ -0.06
EBF1-202ENST00000380654 RHOHQ15669 191 aa14.67□□□□□ -0.06
EBF1-202ENST00000380654 PAPPA-AS1Q5QFB9 102 aa14.67□□□□□ -0.06
EBF1-202ENST00000380654 C4orf3Q8WVX3 66 aa14.67□□□□□ -0.06
EBF1-202ENST00000380654 HERVK_113P61574 105 aa14.67□□□□□ -0.06
EBF1-202ENST00000380654 C20orf203Q8NBC4 194 aa14.67□□□□□ -0.06
EBF1-202ENST00000380654 CCDC168Q8NDH2 2452 aa14.66□□□□□ -0.06
EBF1-202ENST00000380654 A0A1B0GWB2 263 aa14.66□□□□□ -0.06
EBF1-202ENST00000380654 SRSF9Q13242 221 aaKnown RBP eCLIP14.66□□□□□ -0.06
EBF1-202ENST00000380654 LRRC75A-AS1Q8N1F1 130 aa14.66□□□□□ -0.06
EBF1-202ENST00000380654 MAP6D1Q9H9H5 199 aa14.66□□□□□ -0.06
EBF1-202ENST00000380654 PEMTQ9UBM1 199 aa14.66□□□□□ -0.06
EBF1-202ENST00000380654 NIPBLQ6KC79 2804 aaeCLIP14.66□□□□□ -0.06
EBF1-202ENST00000380654 FLNAP21333 2647 aaKnown RBP14.66□□□□□ -0.06
EBF1-202ENST00000380654 A8MTW9 85 aa14.65□□□□□ -0.06
EBF1-202ENST00000380654 RRN3P1Q2M238 152 aa14.65□□□□□ -0.06
EBF1-202ENST00000380654 A0A0J9YY99 117 aa14.64□□□□□ -0.07
EBF1-202ENST00000380654 C11orf44Q8N8P7 122 aa14.64□□□□□ -0.07
EBF1-202ENST00000380654 DYNLRB2Q8TF09 96 aa14.64□□□□□ -0.07
EBF1-202ENST00000380654 SPAG8Q99932 426 aaPredicted RBP14.64□□□□□ -0.07
EBF1-202ENST00000380654 H3BMG7 143 aa14.64□□□□□ -0.07
EBF1-202ENST00000380654 TENM4Q6N022 2769 aa14.64□□□□□ -0.07
EBF1-202ENST00000380654 Q6ZSN1 163 aa14.64□□□□□ -0.07
EBF1-202ENST00000380654 SETD2Q9BYW2 2564 aaPredicted RBP14.63□□□□□ -0.07
EBF1-202ENST00000380654 IGLV4-3A0A075B6K6 122 aa14.63□□□□□ -0.07
EBF1-202ENST00000380654 DEFB114Q30KQ6 69 aa14.63□□□□□ -0.07
EBF1-202ENST00000380654 IGHV3-64A0A075B6Q5 118 aa14.62□□□□□ -0.07
EBF1-202ENST00000380654 Q6ZSV7 163 aa14.62□□□□□ -0.07
EBF1-202ENST00000380654 NFE4Q86UQ8 179 aa14.62□□□□□ -0.07
EBF1-202ENST00000380654 AMELXQ99217 191 aa14.62□□□□□ -0.07
EBF1-202ENST00000380654 G3V4G9 280 aa14.61□□□□□ -0.07
EBF1-202ENST00000380654 MTURNQ8N3F0 131 aa14.61□□□□□ -0.07
EBF1-202ENST00000380654 WFDC11Q8NEX6 87 aa14.61□□□□□ -0.07
EBF1-202ENST00000380654 PGPEP1Q9NXJ5 209 aa14.61□□□□□ -0.07
EBF1-202ENST00000380654 M0R2P5 195 aa14.61□□□□□ -0.07
EBF1-202ENST00000380654 CEMP1Q6PRD7 247 aaPredicted RBP14.61□□□□□ -0.07
EBF1-202ENST00000380654 A0A0J9YXV3 536 aa14.6□□□□□ -0.07
EBF1-202ENST00000380654 J3QQQ9 107 aa14.6□□□□□ -0.07
EBF1-202ENST00000380654 A0A1W2PRX2 142 aa14.6□□□□□ -0.07
EBF1-202ENST00000380654 CD28P10747 220 aa14.6□□□□□ -0.07
EBF1-202ENST00000380654 RPL24P83731 157 aaKnown RBP14.6□□□□□ -0.07
EBF1-202ENST00000380654 WFDC2Q14508 124 aa14.6□□□□□ -0.07
EBF1-202ENST00000380654 FAM104AQ969W3 186 aa14.6□□□□□ -0.07
EBF1-202ENST00000380654 LINC01587Q99440 93 aa14.6□□□□□ -0.07
EBF1-202ENST00000380654 TRAV2A0A0B4J234 112 aa14.59□□□□□ -0.07
EBF1-202ENST00000380654 UBE2D1P51668 147 aa14.59□□□□□ -0.07
EBF1-202ENST00000380654 HIST2H2BCQ6DN03 193 aa14.59□□□□□ -0.07
EBF1-202ENST00000380654 SFTA2Q6UW10 78 aa14.59□□□□□ -0.07
EBF1-202ENST00000380654 TEX48A0A1B0GUV7 120 aa14.59□□□□□ -0.07
EBF1-202ENST00000380654 APOMO95445 188 aa14.59□□□□□ -0.07
EBF1-202ENST00000380654 ZNF22P17026 224 aaPredicted RBP14.59□□□□□ -0.07
EBF1-202ENST00000380654 ZNF415Q09FC8 603 aa14.59□□□□□ -0.07
EBF1-202ENST00000380654 RNASE13Q5GAN3 156 aaKnown RBP14.59□□□□□ -0.07
EBF1-202ENST00000380654 VCX2Q9H322 139 aa14.59□□□□□ -0.07
EBF1-202ENST00000380654 MRPL16Q9NX20 251 aaKnown RBP14.59□□□□□ -0.07
EBF1-202ENST00000380654 TMEM223A0PJW6 202 aa14.58□□□□□ -0.08
EBF1-202ENST00000380654 CFAP126Q5VTH2 177 aa14.58□□□□□ -0.08
EBF1-202ENST00000380654 C11orf72Q8NBR9 251 aa14.58□□□□□ -0.08
EBF1-202ENST00000380654 TMEM238LA0A1B0GVL6 79 aa14.58□□□□□ -0.08
EBF1-202ENST00000380654 A6NJY4 79 aa14.58□□□□□ -0.08
EBF1-202ENST00000380654 A8MWV9 139 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms