RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 Q8NA96 180 aa12.25□□□□□ -0.45
COL2A1-202ENST00000380518 OTOGLQ3ZCN5 2332 aa12.25□□□□□ -0.45
COL2A1-202ENST00000380518 A0A0B4J2C4 111 aa12.25□□□□□ -0.45
COL2A1-202ENST00000380518 H3BQ85 93 aa12.25□□□□□ -0.45
COL2A1-202ENST00000380518 A0A1B0GXF2 115 aa12.25□□□□□ -0.45
COL2A1-202ENST00000380518 TRBV12-3P01733 135 aa12.25□□□□□ -0.45
COL2A1-202ENST00000380518 SORL1Q92673 2214 aa12.25□□□□□ -0.45
COL2A1-202ENST00000380518 COL4A3Q01955 1670 aa12.24□□□□□ -0.45
COL2A1-202ENST00000380518 B5MCH6 92 aa12.24□□□□□ -0.45
COL2A1-202ENST00000380518 TMEM258P61165 79 aa12.24□□□□□ -0.45
COL2A1-202ENST00000380518 IGHV1-58A0A0C4DH39 117 aa12.24□□□□□ -0.45
COL2A1-202ENST00000380518 TRBV10-1A0A0K0K1A3 114 aa12.24□□□□□ -0.45
COL2A1-202ENST00000380518 SPATA12Q7Z6I5 190 aa12.24□□□□□ -0.45
COL2A1-202ENST00000380518 TIRAPP58753 221 aa12.24□□□□□ -0.45
COL2A1-202ENST00000380518 NDUFS5O43920 106 aa12.23□□□□□ -0.45
COL2A1-202ENST00000380518 BRWD1-AS2P59051 145 aa12.23□□□□□ -0.45
COL2A1-202ENST00000380518 TMEM263Q8WUH6 116 aaKnown RBP12.23□□□□□ -0.45
COL2A1-202ENST00000380518 CCDC140Q96MF4 163 aa12.22□□□□□ -0.45
COL2A1-202ENST00000380518 ODF3BA8MYP8 253 aa12.22□□□□□ -0.45
COL2A1-202ENST00000380518 JMJD7-PLA2G4BH0Y9G9 81 aa12.22□□□□□ -0.45
COL2A1-202ENST00000380518 H3BT86 120 aa12.22□□□□□ -0.45
COL2A1-202ENST00000380518 SPAG11BQ08648 103 aa12.22□□□□□ -0.45
COL2A1-202ENST00000380518 DEFB135Q30KP9 77 aa12.22□□□□□ -0.45
COL2A1-202ENST00000380518 TNRC6AQ8NDV7 1962 aaKnown RBP12.22□□□□□ -0.45
COL2A1-202ENST00000380518 CLPSL1A2RUU4 121 aa12.22□□□□□ -0.45
COL2A1-202ENST00000380518 TNFRSF13BO14836 293 aaPredicted RBP12.22□□□□□ -0.45
COL2A1-202ENST00000380518 LECT2O14960 151 aa12.21□□□□□ -0.45
COL2A1-202ENST00000380518 IGLV2-8P01709 118 aa12.21□□□□□ -0.45
COL2A1-202ENST00000380518 LMO4P61968 165 aa12.21□□□□□ -0.45
COL2A1-202ENST00000380518 Q6ZPA2 131 aa12.21□□□□□ -0.45
COL2A1-202ENST00000380518 LGALS9O00182 355 aa12.21□□□□□ -0.45
COL2A1-202ENST00000380518 TRBV10-2A0A0K0K1G8 114 aa12.21□□□□□ -0.45
COL2A1-202ENST00000380518 ZNF80P51504 273 aaPredicted RBP12.21□□□□□ -0.45
COL2A1-202ENST00000380518 CITED2Q99967 270 aaPredicted RBP12.21□□□□□ -0.46
COL2A1-202ENST00000380518 PRO0255Q9UI72 69 aa12.2□□□□□ -0.46
COL2A1-202ENST00000380518 MIR7-3HGQ8N6C7 128 aa12.2□□□□□ -0.46
COL2A1-202ENST00000380518 ATOX1O00244 68 aa12.2□□□□□ -0.46
COL2A1-202ENST00000380518 NREPQ16612 68 aa12.2□□□□□ -0.46
COL2A1-202ENST00000380518 FOXI1Q12951 378 aa12.2□□□□□ -0.46
COL2A1-202ENST00000380518 LINC00322Q6ZN03 302 aaPredicted RBP12.2□□□□□ -0.46
COL2A1-202ENST00000380518 PRR14LQ5THK1 2151 aa12.2□□□□□ -0.46
COL2A1-202ENST00000380518 IGKV3D-7A0A0C4DH55 119 aa12.19□□□□□ -0.46
COL2A1-202ENST00000380518 INSL3P51460 131 aa12.19□□□□□ -0.46
COL2A1-202ENST00000380518 MLST8Q9BVC4 326 aa12.19□□□□□ -0.46
COL2A1-202ENST00000380518 KLK12Q9UKR0 248 aa12.19□□□□□ -0.46
COL2A1-202ENST00000380518 LOXL1Q08397 574 aaPredicted RBP12.19□□□□□ -0.46
COL2A1-202ENST00000380518 RNASE8Q8TDE3 154 aaKnown RBP12.19□□□□□ -0.46
COL2A1-202ENST00000380518 MAP6D1Q9H9H5 199 aa12.18□□□□□ -0.46
COL2A1-202ENST00000380518 IGHV4-28A0A0C4DH34 117 aa12.18□□□□□ -0.46
COL2A1-202ENST00000380518 ZNF295-AS1Q8N0V1 137 aa12.18□□□□□ -0.46
COL2A1-202ENST00000380518 IGLC6P0CF74 106 aa12.18□□□□□ -0.46
COL2A1-202ENST00000380518 A0A1B0GX51 115 aa12.17□□□□□ -0.46
COL2A1-202ENST00000380518 F8W735 103 aaPredicted RBP12.17□□□□□ -0.46
COL2A1-202ENST00000380518 NCR3O14931 201 aa12.17□□□□□ -0.46
COL2A1-202ENST00000380518 NDUFB1O75438 58 aa12.17□□□□□ -0.46
COL2A1-202ENST00000380518 ODF3Q96PU9 254 aa12.17□□□□□ -0.46
COL2A1-202ENST00000380518 DEFB4AO15263 64 aa12.17□□□□□ -0.46
COL2A1-202ENST00000380518 CRIP3Q6Q6R5 217 aa12.17□□□□□ -0.46
COL2A1-202ENST00000380518 CLEC2BQ92478 149 aa12.17□□□□□ -0.46
COL2A1-202ENST00000380518 DIRC1Q969H9 104 aa12.17□□□□□ -0.46
COL2A1-202ENST00000380518 KIF26AQ9ULI4 1882 aaPredicted RBP12.17□□□□□ -0.46
COL2A1-202ENST00000380518 TM2D2Q9BX73 214 aa12.16□□□□□ -0.46
COL2A1-202ENST00000380518 C2CD3Q4AC94 2353 aa12.16□□□□□ -0.46
COL2A1-202ENST00000380518 FAM236AA0A1B0GUQ0 79 aa12.16□□□□□ -0.46
COL2A1-202ENST00000380518 FAM236BA0A1B0GV22 79 aa12.16□□□□□ -0.46
COL2A1-202ENST00000380518 IGF1P05019 195 aa12.16□□□□□ -0.46
COL2A1-202ENST00000380518 PSMB8P28062 276 aa12.16□□□□□ -0.46
COL2A1-202ENST00000380518 LINC01548A6NM66 108 aa12.16□□□□□ -0.46
COL2A1-202ENST00000380518 ARHGAP21Q5T5U3 1957 aa12.16□□□□□ -0.46
COL2A1-202ENST00000380518 Q6ZUT4 128 aa12.16□□□□□ -0.46
COL2A1-202ENST00000380518 FSTL3O95633 263 aa12.15□□□□□ -0.46
COL2A1-202ENST00000380518 NDUFA11Q86Y39 141 aa12.15□□□□□ -0.46
COL2A1-202ENST00000380518 SMAD5-AS1Q9Y6J3 95 aa12.15□□□□□ -0.46
COL2A1-202ENST00000380518 NAV2Q8IVL1 2488 aa12.15□□□□□ -0.47
COL2A1-202ENST00000380518 GDF5OSQ5U4N7 250 aa12.14□□□□□ -0.47
COL2A1-202ENST00000380518 CEMP1Q6PRD7 247 aaPredicted RBP12.14□□□□□ -0.47
COL2A1-202ENST00000380518 MP68P56378 58 aa12.14□□□□□ -0.47
COL2A1-202ENST00000380518 EIF4EBP1Q13541 118 aaPredicted RBP12.14□□□□□ -0.47
COL2A1-202ENST00000380518 MIAQ16674 131 aa12.14□□□□□ -0.47
COL2A1-202ENST00000380518 MBD6Q96DN6 1003 aa12.14□□□□□ -0.47
COL2A1-202ENST00000380518 DNAJC9-AS1A6NH13 148 aa12.13□□□□□ -0.47
COL2A1-202ENST00000380518 C1orf229Q6ZS94 237 aaPredicted RBP12.13□□□□□ -0.47
COL2A1-202ENST00000380518 SS18L2Q9UHA2 77 aa12.13□□□□□ -0.47
COL2A1-202ENST00000380518 K7EQG2 157 aa12.13□□□□□ -0.47
COL2A1-202ENST00000380518 TMEM256-PLSCR3K7ERE1 68 aa12.13□□□□□ -0.47
COL2A1-202ENST00000380518 CCDC168Q8NDH2 2452 aa12.13□□□□□ -0.47
COL2A1-202ENST00000380518 NAV3Q8IVL0 2385 aa12.12□□□□□ -0.47
COL2A1-202ENST00000380518 PLA2G5P39877 138 aa12.12□□□□□ -0.47
COL2A1-202ENST00000380518 NFE4Q86UQ8 179 aa12.12□□□□□ -0.47
COL2A1-202ENST00000380518 UBE2AP49459 152 aa12.12□□□□□ -0.47
COL2A1-202ENST00000380518 PDE6GP18545 87 aa12.11□□□□□ -0.47
COL2A1-202ENST00000380518 HIGD2BQ4VC39 106 aa12.11□□□□□ -0.47
COL2A1-202ENST00000380518 OBSL1O75147 1896 aa12.11□□□□□ -0.47
COL2A1-202ENST00000380518 CRYGBP07316 175 aa12.11□□□□□ -0.47
COL2A1-202ENST00000380518 Q6ZTI0 123 aa12.11□□□□□ -0.47
COL2A1-202ENST00000380518 TP53TG3Q9ULZ0 132 aa12.11□□□□□ -0.47
COL2A1-202ENST00000380518 A0A0J9YXY3 114 aa12.1□□□□□ -0.47
COL2A1-202ENST00000380518 C22orf34Q6ZV56 151 aa12.1□□□□□ -0.47
COL2A1-202ENST00000380518 EBI3Q14213 229 aa12.1□□□□□ -0.47
COL2A1-202ENST00000380518 DSCAML1Q8TD84 2053 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms