RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 FER1L5A0AVI2 2057 aa12.99□□□□□ -0.33
COL4A3BP-203ENST00000380494 H7C423 109 aa12.98□□□□□ -0.33
COL4A3BP-203ENST00000380494 DKK4Q9UBT3 224 aa12.98□□□□□ -0.33
COL4A3BP-203ENST00000380494 HHLA3Q9XRX5 114 aa12.98□□□□□ -0.33
COL4A3BP-203ENST00000380494 IGLV10-54A0A075B6I4 117 aa12.97□□□□□ -0.33
COL4A3BP-203ENST00000380494 IGHV3-30P01768 117 aa12.97□□□□□ -0.33
COL4A3BP-203ENST00000380494 IGHV3-30-5P0DP03 117 aa12.97□□□□□ -0.33
COL4A3BP-203ENST00000380494 RNF185Q96GF1 192 aa12.97□□□□□ -0.33
COL4A3BP-203ENST00000380494 TIMM17BO60830 172 aa12.97□□□□□ -0.33
COL4A3BP-203ENST00000380494 Q8N7P7 452 aa12.97□□□□□ -0.33
COL4A3BP-203ENST00000380494 MRPS12O15235 138 aaKnown RBP12.97□□□□□ -0.33
COL4A3BP-203ENST00000380494 SPRY4Q9C004 299 aa12.97□□□□□ -0.33
COL4A3BP-203ENST00000380494 SPAG11BQ08648 103 aa12.97□□□□□ -0.33
COL4A3BP-203ENST00000380494 DENND4CQ5VZ89 1909 aa12.97□□□□□ -0.33
COL4A3BP-203ENST00000380494 BPY2O14599 106 aa12.96□□□□□ -0.33
COL4A3BP-203ENST00000380494 CGB3P0DN86 165 aa12.96□□□□□ -0.33
COL4A3BP-203ENST00000380494 CGB7P0DN87 165 aa12.96□□□□□ -0.33
COL4A3BP-203ENST00000380494 IGHV4OR15-8A0A075B7B6 117 aa12.96□□□□□ -0.33
COL4A3BP-203ENST00000380494 A0A087WW49 117 aa12.96□□□□□ -0.33
COL4A3BP-203ENST00000380494 ZNF106Q9H2Y7 1883 aaKnown RBP12.96□□□□□ -0.34
COL4A3BP-203ENST00000380494 SPART-AS1P0CW21 52 aa12.95□□□□□ -0.34
COL4A3BP-203ENST00000380494 LINC00308Q8TCZ7 52 aa12.95□□□□□ -0.34
COL4A3BP-203ENST00000380494 FAM110AQ9BQ89 295 aa12.95□□□□□ -0.34
COL4A3BP-203ENST00000380494 M0QXV9 152 aa12.95□□□□□ -0.34
COL4A3BP-203ENST00000380494 DEFB136Q30KP8 78 aa12.95□□□□□ -0.34
COL4A3BP-203ENST00000380494 MAPK1IP1LQ8NDC0 245 aa12.95□□□□□ -0.34
COL4A3BP-203ENST00000380494 TMEM263Q8WUH6 116 aaKnown RBP12.95□□□□□ -0.34
COL4A3BP-203ENST00000380494 COX7CP15954 63 aa12.95□□□□□ -0.34
COL4A3BP-203ENST00000380494 ICE1Q9Y2F5 2266 aa12.94□□□□□ -0.34
COL4A3BP-203ENST00000380494 IGHV4-38-2P0DP08 117 aa12.94□□□□□ -0.34
COL4A3BP-203ENST00000380494 IGLV4-3A0A075B6K6 122 aa12.94□□□□□ -0.34
COL4A3BP-203ENST00000380494 ENHOQ6UWT2 76 aa12.94□□□□□ -0.34
COL4A3BP-203ENST00000380494 RTTNQ86VV8 2226 aa12.94□□□□□ -0.34
COL4A3BP-203ENST00000380494 CCDC179H3BU77 68 aa12.93□□□□□ -0.34
COL4A3BP-203ENST00000380494 PRB2P02812 416 aaPredicted RBP12.93□□□□□ -0.34
COL4A3BP-203ENST00000380494 C9orf66Q5T8R8 295 aa12.93□□□□□ -0.34
COL4A3BP-203ENST00000380494 FAM222AQ5U5X8 452 aa12.93□□□□□ -0.34
COL4A3BP-203ENST00000380494 CLPSL1A2RUU4 121 aa12.93□□□□□ -0.34
COL4A3BP-203ENST00000380494 ZFAND2AQ8N6M9 145 aa12.93□□□□□ -0.34
COL4A3BP-203ENST00000380494 BLCAPP62952 87 aa12.93□□□□□ -0.34
COL4A3BP-203ENST00000380494 CEMP1Q6PRD7 247 aaPredicted RBP12.93□□□□□ -0.34
COL4A3BP-203ENST00000380494 XGP55808 180 aa12.92□□□□□ -0.34
COL4A3BP-203ENST00000380494 C4orf3Q8WVX3 66 aa12.92□□□□□ -0.34
COL4A3BP-203ENST00000380494 IGF2-ASQ6U949 168 aa12.92□□□□□ -0.34
COL4A3BP-203ENST00000380494 MPLKIPQ8TAP9 179 aa12.92□□□□□ -0.34
COL4A3BP-203ENST00000380494 PLA2G5P39877 138 aa12.92□□□□□ -0.34
COL4A3BP-203ENST00000380494 CRIP1P50238 77 aa12.92□□□□□ -0.34
COL4A3BP-203ENST00000380494 CCDC140Q96MF4 163 aa12.92□□□□□ -0.34
COL4A3BP-203ENST00000380494 IBA57-AS1B1ANH7 110 aa12.92□□□□□ -0.34
COL4A3BP-203ENST00000380494 SIRPDQ9H106 197 aa12.91□□□□□ -0.34
COL4A3BP-203ENST00000380494 UFSP1Q6NVU6 142 aa12.91□□□□□ -0.34
COL4A3BP-203ENST00000380494 PIP4P1Q86T03 277 aa12.91□□□□□ -0.34
COL4A3BP-203ENST00000380494 PYGO1Q9Y3Y4 419 aa12.91□□□□□ -0.34
COL4A3BP-203ENST00000380494 LST1O00453 97 aa12.91□□□□□ -0.34
COL4A3BP-203ENST00000380494 UNQ9165/PRO28630Q6UXU0 137 aa12.9□□□□□ -0.34
COL4A3BP-203ENST00000380494 ODF3BA8MYP8 253 aa12.9□□□□□ -0.34
COL4A3BP-203ENST00000380494 IGLV2-11P01706 119 aa12.89□□□□□ -0.35
COL4A3BP-203ENST00000380494 PIK3CD-AS1Q5SR53 167 aa12.89□□□□□ -0.35
COL4A3BP-203ENST00000380494 SMIM9A6NGZ8 99 aa12.89□□□□□ -0.35
COL4A3BP-203ENST00000380494 IGHV4-61A0A0C4DH41 118 aa12.88□□□□□ -0.35
COL4A3BP-203ENST00000380494 C10orf105Q8TEF2 133 aa12.88□□□□□ -0.35
COL4A3BP-203ENST00000380494 TRBV6-5A0A0K0K1A5 114 aa12.88□□□□□ -0.35
COL4A3BP-203ENST00000380494 Q8N976 141 aa12.88□□□□□ -0.35
COL4A3BP-203ENST00000380494 LINC00467Q9BRT7 94 aa12.88□□□□□ -0.35
COL4A3BP-203ENST00000380494 USP17L23D6RBM5 183 aa12.87□□□□□ -0.35
COL4A3BP-203ENST00000380494 DEFB1P60022 68 aa12.87□□□□□ -0.35
COL4A3BP-203ENST00000380494 CDKN2A-AS1Q9UH64 79 aa12.87□□□□□ -0.35
COL4A3BP-203ENST00000380494 MRPS36P82909 103 aaKnown RBP12.87□□□□□ -0.35
COL4A3BP-203ENST00000380494 SPTSSBQ8NFR3 76 aa12.87□□□□□ -0.35
COL4A3BP-203ENST00000380494 TRBV27A0A0K0K1C4 114 aa12.86□□□□□ -0.35
COL4A3BP-203ENST00000380494 NRACQ8N912 160 aa12.86□□□□□ -0.35
COL4A3BP-203ENST00000380494 M0QY20 66 aa12.86□□□□□ -0.35
COL4A3BP-203ENST00000380494 SEM1Q6ZVN7 128 aa12.86□□□□□ -0.35
COL4A3BP-203ENST00000380494 GRNP28799 593 aaKnown RBP12.85□□□□□ -0.35
COL4A3BP-203ENST00000380494 ZFP36P26651 326 aaKnown RBP12.85□□□□□ -0.35
COL4A3BP-203ENST00000380494 C1orf229Q6ZS94 237 aaPredicted RBP12.85□□□□□ -0.35
COL4A3BP-203ENST00000380494 A6NDX4 124 aa12.85□□□□□ -0.35
COL4A3BP-203ENST00000380494 Q6JHZ5 121 aa12.85□□□□□ -0.35
COL4A3BP-203ENST00000380494 PRO0255Q9UI72 69 aa12.85□□□□□ -0.35
COL4A3BP-203ENST00000380494 SEC61GP60059 68 aa12.84□□□□□ -0.35
COL4A3BP-203ENST00000380494 FSTL3O95633 263 aa12.84□□□□□ -0.35
COL4A3BP-203ENST00000380494 MAP6D1Q9H9H5 199 aa12.84□□□□□ -0.35
COL4A3BP-203ENST00000380494 A0A0U1RQV1 116 aa12.84□□□□□ -0.35
COL4A3BP-203ENST00000380494 UBE2AP49459 152 aa12.84□□□□□ -0.35
COL4A3BP-203ENST00000380494 MSMPQ1L6U9 139 aa12.84□□□□□ -0.35
COL4A3BP-203ENST00000380494 ZMAT4Q9H898 229 aa12.84□□□□□ -0.35
COL4A3BP-203ENST00000380494 C1orf195Q5TG92 126 aa12.84□□□□□ -0.35
COL4A3BP-203ENST00000380494 C20orf173Q96LM9 149 aa12.84□□□□□ -0.35
COL4A3BP-203ENST00000380494 LINC00310P59036 64 aa12.83□□□□□ -0.36
COL4A3BP-203ENST00000380494 CCL18P55774 89 aa12.82□□□□□ -0.36
COL4A3BP-203ENST00000380494 SMAD5-AS1Q9Y6J3 95 aa12.82□□□□□ -0.36
COL4A3BP-203ENST00000380494 IGHV4-30-2A0A087WSY4 118 aa12.81□□□□□ -0.36
COL4A3BP-203ENST00000380494 ZFAND3Q9H8U3 227 aa12.81□□□□□ -0.36
COL4A3BP-203ENST00000380494 H0Y9J4 135 aa12.81□□□□□ -0.36
COL4A3BP-203ENST00000380494 LINC00694P0DN24 101 aa12.8□□□□□ -0.36
COL4A3BP-203ENST00000380494 KIAA1549LQ6ZVL6 1849 aa12.8□□□□□ -0.36
COL4A3BP-203ENST00000380494 SLPIP03973 132 aa12.8□□□□□ -0.36
COL4A3BP-203ENST00000380494 INSL3P51460 131 aa12.8□□□□□ -0.36
COL4A3BP-203ENST00000380494 DIDO1Q9BTC0 2240 aaKnown RBP12.8□□□□□ -0.36
COL4A3BP-203ENST00000380494 IGF1P05019 195 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms