RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 ADAMTSL4-AS1Q5T5F5 129 aa11.69□□□□□ -0.54
CSNK1A1-202ENST00000377843 ABCA4P78363 2273 aa11.69□□□□□ -0.54
CSNK1A1-202ENST00000377843 F6UB75 175 aa11.69□□□□□ -0.54
CSNK1A1-202ENST00000377843 VCYO14598 125 aa11.69□□□□□ -0.54
CSNK1A1-202ENST00000377843 KLK5Q9Y337 293 aaPredicted RBP11.69□□□□□ -0.54
CSNK1A1-202ENST00000377843 U3KQE9 123 aa11.69□□□□□ -0.54
CSNK1A1-202ENST00000377843 A0A0J9YXV3 536 aa11.68□□□□□ -0.54
CSNK1A1-202ENST00000377843 CD3EP07766 207 aa11.68□□□□□ -0.54
CSNK1A1-202ENST00000377843 VMO1Q7Z5L0 202 aa11.68□□□□□ -0.54
CSNK1A1-202ENST00000377843 METTL26Q96S19 204 aa11.68□□□□□ -0.54
CSNK1A1-202ENST00000377843 PKD1L2Q7Z442 2459 aa11.68□□□□□ -0.54
CSNK1A1-202ENST00000377843 SMCR5Q8TEV8 140 aa11.68□□□□□ -0.54
CSNK1A1-202ENST00000377843 ZNF256Q9Y2P7 627 aaPredicted RBP11.68□□□□□ -0.54
CSNK1A1-202ENST00000377843 LENEPQ9Y5L5 61 aa11.68□□□□□ -0.54
CSNK1A1-202ENST00000377843 LY6HO94772 140 aa11.67□□□□□ -0.54
CSNK1A1-202ENST00000377843 NPC2P61916 151 aa11.67□□□□□ -0.54
CSNK1A1-202ENST00000377843 G3V318 75 aa11.67□□□□□ -0.54
CSNK1A1-202ENST00000377843 NXPH4O95158 308 aa11.67□□□□□ -0.54
CSNK1A1-202ENST00000377843 PRSS2P07478 247 aa11.67□□□□□ -0.54
CSNK1A1-202ENST00000377843 Q8N9W7 124 aa11.67□□□□□ -0.54
CSNK1A1-202ENST00000377843 DNAJC30Q96LL9 226 aa11.67□□□□□ -0.54
CSNK1A1-202ENST00000377843 MED14OSP0DP75 135 aa11.66□□□□□ -0.54
CSNK1A1-202ENST00000377843 FAM110DQ8TAY7 271 aaPredicted RBP11.66□□□□□ -0.54
CSNK1A1-202ENST00000377843 EEF1AKMT3Q96AZ1 226 aa11.66□□□□□ -0.54
CSNK1A1-202ENST00000377843 A0A0J9YX75 114 aa11.66□□□□□ -0.54
CSNK1A1-202ENST00000377843 LST1O00453 97 aa11.66□□□□□ -0.54
CSNK1A1-202ENST00000377843 TMEM101Q96IK0 257 aa11.66□□□□□ -0.54
CSNK1A1-202ENST00000377843 LINC00477Q96M19 166 aa11.66□□□□□ -0.54
CSNK1A1-202ENST00000377843 ACACBO00763 2458 aa11.65□□□□□ -0.54
CSNK1A1-202ENST00000377843 TRBV27A0A0K0K1C4 114 aa11.65□□□□□ -0.54
CSNK1A1-202ENST00000377843 F5H697 171 aa11.65□□□□□ -0.54
CSNK1A1-202ENST00000377843 ATP6V0E1O15342 81 aa11.65□□□□□ -0.54
CSNK1A1-202ENST00000377843 C9orf153Q5TBE3 101 aa11.65□□□□□ -0.54
CSNK1A1-202ENST00000377843 I3L3M4 83 aa11.65□□□□□ -0.55
CSNK1A1-202ENST00000377843 NDUFA7O95182 113 aa11.65□□□□□ -0.55
CSNK1A1-202ENST00000377843 CACNA1AO00555 2505 aa11.64□□□□□ -0.55
CSNK1A1-202ENST00000377843 IGHV3-30-3P0DP02 117 aa11.64□□□□□ -0.55
CSNK1A1-202ENST00000377843 FAM19A4Q96LR4 140 aa11.64□□□□□ -0.55
CSNK1A1-202ENST00000377843 LINC00527Q9UJ94 153 aa11.64□□□□□ -0.55
CSNK1A1-202ENST00000377843 TRAV8-3A0A0A6YYJ7 113 aa11.64□□□□□ -0.55
CSNK1A1-202ENST00000377843 LY6DQ14210 128 aa11.64□□□□□ -0.55
CSNK1A1-202ENST00000377843 C9orf139Q6ZV77 190 aa11.64□□□□□ -0.55
CSNK1A1-202ENST00000377843 C3orf22Q8N5N4 141 aa11.64□□□□□ -0.55
CSNK1A1-202ENST00000377843 ASH1LQ9NR48 2969 aaKnown RBP11.64□□□□□ -0.55
CSNK1A1-202ENST00000377843 ZFYVE26Q68DK2 2539 aa11.63□□□□□ -0.55
CSNK1A1-202ENST00000377843 IGHV1-69P01742 117 aa11.63□□□□□ -0.55
CSNK1A1-202ENST00000377843 SPXQ9BT56 116 aa11.63□□□□□ -0.55
CSNK1A1-202ENST00000377843 SPTAN1Q13813 2472 aaKnown RBP11.63□□□□□ -0.55
CSNK1A1-202ENST00000377843 HERVK_113P63121 156 aa11.63□□□□□ -0.55
CSNK1A1-202ENST00000377843 A8MZ25 164 aa11.62□□□□□ -0.55
CSNK1A1-202ENST00000377843 SPTBN1Q01082 2364 aaKnown RBP11.62□□□□□ -0.55
CSNK1A1-202ENST00000377843 CFAP46Q8IYW2 2715 aa11.62□□□□□ -0.55
CSNK1A1-202ENST00000377843 SOCS3O14543 225 aa11.62□□□□□ -0.55
CSNK1A1-202ENST00000377843 NPFFO15130 113 aa11.62□□□□□ -0.55
CSNK1A1-202ENST00000377843 FAM74A4Q5TZK3 123 aa11.62□□□□□ -0.55
CSNK1A1-202ENST00000377843 ZFHX3Q15911 3703 aa11.61□□□□□ -0.55
CSNK1A1-202ENST00000377843 IGLV4-3A0A075B6K6 122 aa11.61□□□□□ -0.55
CSNK1A1-202ENST00000377843 COX6CP09669 75 aa11.6□□□□□ -0.55
CSNK1A1-202ENST00000377843 UNQ9165/PRO28630Q6UXU0 137 aa11.6□□□□□ -0.55
CSNK1A1-202ENST00000377843 TRBV6-5A0A0K0K1A5 114 aa11.6□□□□□ -0.55
CSNK1A1-202ENST00000377843 APRG1Q8IVJ8 170 aa11.6□□□□□ -0.55
CSNK1A1-202ENST00000377843 FAM104AQ969W3 186 aa11.6□□□□□ -0.55
CSNK1A1-202ENST00000377843 DUX5Q96PT3 197 aa11.6□□□□□ -0.55
CSNK1A1-202ENST00000377843 B9A039 149 aa11.59□□□□□ -0.55
CSNK1A1-202ENST00000377843 KLK9Q2XQG4 91 aa11.59□□□□□ -0.55
CSNK1A1-202ENST00000377843 NSUN5P1Q3KNT7 163 aa11.59□□□□□ -0.55
CSNK1A1-202ENST00000377843 TMEM61Q8N0U2 210 aa11.59□□□□□ -0.55
CSNK1A1-202ENST00000377843 KLK9Q9UKQ9 250 aa11.59□□□□□ -0.55
CSNK1A1-202ENST00000377843 IGKV3-7A0A075B6H7 116 aa11.59□□□□□ -0.55
CSNK1A1-202ENST00000377843 OVOL1O14753 267 aa11.59□□□□□ -0.55
CSNK1A1-202ENST00000377843 IMUPQ9GZP8 106 aa11.59□□□□□ -0.55
CSNK1A1-202ENST00000377843 MIAQ16674 131 aa11.58□□□□□ -0.56
CSNK1A1-202ENST00000377843 FAM19A5Q7Z5A7 132 aaPredicted RBP11.58□□□□□ -0.56
CSNK1A1-202ENST00000377843 C20orf203Q8NBC4 194 aa11.58□□□□□ -0.56
CSNK1A1-202ENST00000377843 DCANP1Q8TF63 244 aa11.58□□□□□ -0.56
CSNK1A1-202ENST00000377843 LINC00526Q96FQ7 95 aa11.58□□□□□ -0.56
CSNK1A1-202ENST00000377843 TIMM21Q9BVV7 248 aa11.58□□□□□ -0.56
CSNK1A1-202ENST00000377843 SPANXDQ9BXN6 97 aa11.58□□□□□ -0.56
CSNK1A1-202ENST00000377843 SPANXCQ9NY87 97 aa11.58□□□□□ -0.56
CSNK1A1-202ENST00000377843 M0QY20 66 aa11.58□□□□□ -0.56
CSNK1A1-202ENST00000377843 UQCRQO14949 82 aa11.58□□□□□ -0.56
CSNK1A1-202ENST00000377843 RPL11P62913 178 aaKnown RBP11.58□□□□□ -0.56
CSNK1A1-202ENST00000377843 CDSNQ15517 529 aa11.58□□□□□ -0.56
CSNK1A1-202ENST00000377843 DAND5Q8N907 189 aa11.58□□□□□ -0.56
CSNK1A1-202ENST00000377843 GRNP28799 593 aaKnown RBP11.57□□□□□ -0.56
CSNK1A1-202ENST00000377843 C5orf47Q569G3 176 aa11.57□□□□□ -0.56
CSNK1A1-202ENST00000377843 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.57□□□□□ -0.56
CSNK1A1-202ENST00000377843 SMIM9A6NGZ8 99 aa11.57□□□□□ -0.56
CSNK1A1-202ENST00000377843 M0R1W7 72 aa11.57□□□□□ -0.56
CSNK1A1-202ENST00000377843 TRBV12-3P01733 135 aa11.57□□□□□ -0.56
CSNK1A1-202ENST00000377843 RNASE13Q5GAN3 156 aaKnown RBP11.57□□□□□ -0.56
CSNK1A1-202ENST00000377843 NDUFA12Q9UI09 145 aa11.57□□□□□ -0.56
CSNK1A1-202ENST00000377843 VPS13CQ709C8 3753 aa11.56□□□□□ -0.56
CSNK1A1-202ENST00000377843 CYSTM1Q9H1C7 97 aa11.56□□□□□ -0.56
CSNK1A1-202ENST00000377843 TRBV7-1A0A0A6YYK4 115 aa11.56□□□□□ -0.56
CSNK1A1-202ENST00000377843 RHOHQ15669 191 aa11.56□□□□□ -0.56
CSNK1A1-202ENST00000377843 IGSF10Q6WRI0 2623 aa11.56□□□□□ -0.56
CSNK1A1-202ENST00000377843 TRAV41A0A0B4J266 112 aa11.55□□□□□ -0.56
CSNK1A1-202ENST00000377843 MED13LQ71F56 2210 aa11.55□□□□□ -0.56
CSNK1A1-202ENST00000377843 C2orf48Q96LS8 159 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms