RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 ZFAND2AQ8N6M9 145 aa9.14□□□□□ -0.95
VRK3-202ENST00000377011 C18orf15Q96N68 181 aa9.14□□□□□ -0.95
VRK3-202ENST00000377011 B9D2Q9BPU9 175 aa9.14□□□□□ -0.95
VRK3-202ENST00000377011 CD7P09564 240 aa9.13□□□□□ -0.95
VRK3-202ENST00000377011 PLNP26678 52 aa9.13□□□□□ -0.95
VRK3-202ENST00000377011 ORMDL2Q53FV1 153 aa9.13□□□□□ -0.95
VRK3-202ENST00000377011 SBSPONQ8IVN8 264 aa9.13□□□□□ -0.95
VRK3-202ENST00000377011 C20orf173Q96LM9 149 aa9.13□□□□□ -0.95
VRK3-202ENST00000377011 SMIM2Q9BVW6 85 aa9.13□□□□□ -0.95
VRK3-202ENST00000377011 UFC1Q9Y3C8 167 aa9.13□□□□□ -0.95
VRK3-202ENST00000377011 STARD9Q9P2P6 4700 aa9.12□□□□□ -0.95
VRK3-202ENST00000377011 A0A087WX48 190 aa9.12□□□□□ -0.95
VRK3-202ENST00000377011 IGHV3-49A0A0A0MS15 119 aa9.12□□□□□ -0.95
VRK3-202ENST00000377011 GATA1P15976 413 aaPredicted RBP9.12□□□□□ -0.95
VRK3-202ENST00000377011 ASIPP42127 132 aa9.12□□□□□ -0.95
VRK3-202ENST00000377011 TMEM61Q8N0U2 210 aa9.12□□□□□ -0.95
VRK3-202ENST00000377011 TM2D2Q9BX73 214 aa9.12□□□□□ -0.95
VRK3-202ENST00000377011 DPH3P1Q9H4G8 78 aa9.12□□□□□ -0.95
VRK3-202ENST00000377011 RYR3Q15413 4870 aa9.12□□□□□ -0.95
VRK3-202ENST00000377011 LINC01549A6NIU2 74 aa9.11□□□□□ -0.95
VRK3-202ENST00000377011 H3BVH4 76 aa9.11□□□□□ -0.95
VRK3-202ENST00000377011 IGHV4-30-4P0DP06 118 aa9.11□□□□□ -0.95
VRK3-202ENST00000377011 PRR9Q5T870 116 aa9.11□□□□□ -0.95
VRK3-202ENST00000377011 NEGR1Q7Z3B1 354 aa9.11□□□□□ -0.95
VRK3-202ENST00000377011 PEMTQ9UBM1 199 aa9.11□□□□□ -0.95
VRK3-202ENST00000377011 SPCS1Q9Y6A9 102 aa9.11□□□□□ -0.95
VRK3-202ENST00000377011 CSMD3Q7Z407 3707 aa9.11□□□□□ -0.95
VRK3-202ENST00000377011 K7EMT4 169 aa9.11□□□□□ -0.95
VRK3-202ENST00000377011 NXPH4O95158 308 aa9.11□□□□□ -0.95
VRK3-202ENST00000377011 RPL32P62910 135 aaKnown RBP9.11□□□□□ -0.95
VRK3-202ENST00000377011 POM121L12Q8N7R1 296 aa9.11□□□□□ -0.95
VRK3-202ENST00000377011 CHAC1Q9BUX1 264 aa9.11□□□□□ -0.95
VRK3-202ENST00000377011 CSTL1Q9H114 145 aa9.11□□□□□ -0.95
VRK3-202ENST00000377011 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.1□□□□□ -0.95
VRK3-202ENST00000377011 WFDC3Q8IUB2 231 aa9.1□□□□□ -0.95
VRK3-202ENST00000377011 DYNLRB2Q8TF09 96 aa9.1□□□□□ -0.95
VRK3-202ENST00000377011 TRBV25-1A0A075B6N4 114 aa9.09□□□□□ -0.95
VRK3-202ENST00000377011 SUMO2P61956 95 aaKnown RBP9.09□□□□□ -0.95
VRK3-202ENST00000377011 ZC2HC1BQ5TFG8 222 aa9.09□□□□□ -0.95
VRK3-202ENST00000377011 CEND1Q8N111 149 aa9.09□□□□□ -0.95
VRK3-202ENST00000377011 TOMM6Q96B49 74 aa9.09□□□□□ -0.95
VRK3-202ENST00000377011 DAZ1Q9NQZ3 744 aaKnown RBP9.09□□□□□ -0.95
VRK3-202ENST00000377011 C19orf73Q9NVV2 129 aa9.09□□□□□ -0.95
VRK3-202ENST00000377011 F8VRH5 84 aa9.08□□□□□ -0.96
VRK3-202ENST00000377011 H7C1H1 209 aa9.08□□□□□ -0.96
VRK3-202ENST00000377011 GCSHP23434 173 aa9.08□□□□□ -0.96
VRK3-202ENST00000377011 S100A4P26447 101 aaKnown RBP9.08□□□□□ -0.96
VRK3-202ENST00000377011 PHLDA3Q9Y5J5 127 aa9.08□□□□□ -0.96
VRK3-202ENST00000377011 IGKV2D-26A0A0A0MRZ7 120 aa9.08□□□□□ -0.96
VRK3-202ENST00000377011 TRAV26-2A0A0B4J265 109 aa9.08□□□□□ -0.96
VRK3-202ENST00000377011 ID1P41134 155 aa9.08□□□□□ -0.96
VRK3-202ENST00000377011 RAB37Q96AX2 223 aa9.08□□□□□ -0.96
VRK3-202ENST00000377011 ODF3Q96PU9 254 aa9.08□□□□□ -0.96
VRK3-202ENST00000377011 MRPL35Q9NZE8 188 aaKnown RBP9.08□□□□□ -0.96
VRK3-202ENST00000377011 ANXA2RQ3ZCQ2 193 aa9.07□□□□□ -0.96
VRK3-202ENST00000377011 GTSCR1Q86UQ5 136 aa9.07□□□□□ -0.96
VRK3-202ENST00000377011 RASL10AQ92737 203 aa9.07□□□□□ -0.96
VRK3-202ENST00000377011 RHPN1-AS1Q9BWJ2 59 aa9.07□□□□□ -0.96
VRK3-202ENST00000377011 KLLNB2CW77 178 aa9.06□□□□□ -0.96
VRK3-202ENST00000377011 FXYD2P54710 66 aa9.06□□□□□ -0.96
VRK3-202ENST00000377011 PHLDA1Q8WV24 401 aaPredicted RBP9.06□□□□□ -0.96
VRK3-202ENST00000377011 RETNQ9HD89 108 aa9.06□□□□□ -0.96
VRK3-202ENST00000377011 SACSQ9NZJ4 4579 aa9.06□□□□□ -0.96
VRK3-202ENST00000377011 RBMY1BA6NDE4 496 aaKnown RBP9.05□□□□□ -0.96
VRK3-202ENST00000377011 RBMY1EA6NEQ0 496 aaKnown RBP9.05□□□□□ -0.96
VRK3-202ENST00000377011 RBMY1DP0C7P1 496 aaKnown RBP9.05□□□□□ -0.96
VRK3-202ENST00000377011 SCGB3A1Q96QR1 104 aa9.05□□□□□ -0.96
VRK3-202ENST00000377011 PLECQ15149 4684 aaKnown RBP9.05□□□□□ -0.96
VRK3-202ENST00000377011 E9PLD3 99 aa9.05□□□□□ -0.96
VRK3-202ENST00000377011 RNASE3P12724 160 aaKnown RBP9.05□□□□□ -0.96
VRK3-202ENST00000377011 RNASE4P34096 147 aaKnown RBP9.05□□□□□ -0.96
VRK3-202ENST00000377011 TCTAP57738 103 aa9.05□□□□□ -0.96
VRK3-202ENST00000377011 Q6ZQT7 251 aa9.05□□□□□ -0.96
VRK3-202ENST00000377011 NEXN-AS1Q8NBZ9 246 aa9.05□□□□□ -0.96
VRK3-202ENST00000377011 CHTOPQ9Y3Y2 248 aaKnown RBP9.05□□□□□ -0.96
VRK3-202ENST00000377011 IGKV3-7A0A075B6H7 116 aa9.04□□□□□ -0.96
VRK3-202ENST00000377011 F8W1H4 67 aa9.04□□□□□ -0.96
VRK3-202ENST00000377011 DYNC2H1Q8NCM8 4307 aaKnown RBP9.04□□□□□ -0.96
VRK3-202ENST00000377011 A8MZ25 164 aa9.03□□□□□ -0.96
VRK3-202ENST00000377011 OR11H12B2RN74 326 aa9.03□□□□□ -0.96
VRK3-202ENST00000377011 RPL11P62913 178 aaKnown RBP9.03□□□□□ -0.96
VRK3-202ENST00000377011 ODF3L2Q3SX64 289 aa9.03□□□□□ -0.96
VRK3-202ENST00000377011 PAPPA-AS1Q5QFB9 102 aa9.03□□□□□ -0.96
VRK3-202ENST00000377011 C14orf178Q8N769 122 aaPredicted RBP9.03□□□□□ -0.96
VRK3-202ENST00000377011 KIF25-AS1Q9Y6Z4 181 aa9.03□□□□□ -0.96
VRK3-202ENST00000377011 A0A1B0GWB2 263 aa9.02□□□□□ -0.96
VRK3-202ENST00000377011 IGLL5B9A064 214 aa9.02□□□□□ -0.96
VRK3-202ENST00000377011 C2orf66Q6UXQ4 117 aa9.02□□□□□ -0.96
VRK3-202ENST00000377011 FOXI2Q6ZQN5 318 aa9.02□□□□□ -0.96
VRK3-202ENST00000377011 OR11H2Q8NH07 326 aa9.02□□□□□ -0.96
VRK3-202ENST00000377011 NHP2Q9NX24 153 aaKnown RBP9.02□□□□□ -0.96
VRK3-202ENST00000377011 J3QR89 54 aa9.02□□□□□ -0.97
VRK3-202ENST00000377011 MGPP08493 103 aa9.02□□□□□ -0.97
VRK3-202ENST00000377011 FAM159AQ6UWV7 190 aa9.02□□□□□ -0.97
VRK3-202ENST00000377011 DCANP1Q8TF63 244 aa9.02□□□□□ -0.97
VRK3-202ENST00000377011 FAM110AQ9BQ89 295 aa9.02□□□□□ -0.97
VRK3-202ENST00000377011 NAA38Q9BRA0 125 aaKnown RBP9.02□□□□□ -0.97
VRK3-202ENST00000377011 TM2D3Q9BRN9 247 aa9.02□□□□□ -0.97
VRK3-202ENST00000377011 AGRNO00468 2067 aa9.02□□□□□ -0.97
VRK3-202ENST00000377011 TRBV6-5A0A0K0K1A5 114 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 157.2 ms