RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 TRBV27A0A0K0K1C4 114 aa12.2□□□□□ -0.46
HLA-A-202ENST00000376806 UFSP1Q6NVU6 142 aa12.2□□□□□ -0.46
HLA-A-202ENST00000376806 C2orf66Q6UXQ4 117 aa12.2□□□□□ -0.46
HLA-A-202ENST00000376806 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.19□□□□□ -0.46
HLA-A-202ENST00000376806 AZU1P20160 251 aa12.19□□□□□ -0.46
HLA-A-202ENST00000376806 IL17DQ8TAD2 202 aa12.19□□□□□ -0.46
HLA-A-202ENST00000376806 SCGB3A1Q96QR1 104 aa12.19□□□□□ -0.46
HLA-A-202ENST00000376806 KIR2DL4Q99706 377 aa12.19□□□□□ -0.46
HLA-A-202ENST00000376806 ZMAT4Q9H898 229 aa12.19□□□□□ -0.46
HLA-A-202ENST00000376806 MRPL16Q9NX20 251 aaKnown RBP12.19□□□□□ -0.46
HLA-A-202ENST00000376806 TP73-AS1Q9UF72 201 aa12.19□□□□□ -0.46
HLA-A-202ENST00000376806 TENM1Q9UKZ4 2725 aa12.19□□□□□ -0.46
HLA-A-202ENST00000376806 H7C1H1 209 aa12.19□□□□□ -0.46
HLA-A-202ENST00000376806 KRTAP24-1Q3LI83 254 aa12.19□□□□□ -0.46
HLA-A-202ENST00000376806 ANKRD39Q53RE8 183 aa12.19□□□□□ -0.46
HLA-A-202ENST00000376806 ZFP2Q6ZN57 461 aa12.19□□□□□ -0.46
HLA-A-202ENST00000376806 IGHV3-73A0A0B4J1V6 119 aa12.18□□□□□ -0.46
HLA-A-202ENST00000376806 GIG44P09565 113 aaPredicted RBP12.18□□□□□ -0.46
HLA-A-202ENST00000376806 RPL35AP18077 110 aaKnown RBP12.18□□□□□ -0.46
HLA-A-202ENST00000376806 CFAP126Q5VTH2 177 aa12.18□□□□□ -0.46
HLA-A-202ENST00000376806 SLC25A34Q6PIV7 304 aa12.18□□□□□ -0.46
HLA-A-202ENST00000376806 MRPS16Q9Y3D3 137 aaKnown RBP12.17□□□□□ -0.46
HLA-A-202ENST00000376806 G0S2P27469 103 aa12.17□□□□□ -0.46
HLA-A-202ENST00000376806 RNASE8Q8TDE3 154 aaKnown RBP12.17□□□□□ -0.46
HLA-A-202ENST00000376806 CYSLTR1Q9Y271 337 aa12.17□□□□□ -0.46
HLA-A-202ENST00000376806 A0A087WX48 190 aa12.16□□□□□ -0.46
HLA-A-202ENST00000376806 TRAV12-1A0A0B4J245 112 aa12.16□□□□□ -0.46
HLA-A-202ENST00000376806 RHODO00212 210 aa12.16□□□□□ -0.46
HLA-A-202ENST00000376806 DPM2O94777 84 aa12.16□□□□□ -0.46
HLA-A-202ENST00000376806 IGKCP01834 107 aa12.16□□□□□ -0.46
HLA-A-202ENST00000376806 COX8AP10176 69 aa12.16□□□□□ -0.46
HLA-A-202ENST00000376806 RIPPLY3P57055 190 aa12.16□□□□□ -0.46
HLA-A-202ENST00000376806 STPG4Q8N801 248 aa12.16□□□□□ -0.46
HLA-A-202ENST00000376806 TMEM263Q8WUH6 116 aaKnown RBP12.16□□□□□ -0.46
HLA-A-202ENST00000376806 CITED1Q99966 193 aa12.16□□□□□ -0.46
HLA-A-202ENST00000376806 TP53TG1Q9Y2A0 90 aa12.16□□□□□ -0.46
HLA-A-202ENST00000376806 RS1O15537 224 aa12.15□□□□□ -0.46
HLA-A-202ENST00000376806 ERASQ7Z444 233 aa12.15□□□□□ -0.46
HLA-A-202ENST00000376806 DEFB104AQ8WTQ1 72 aa12.15□□□□□ -0.46
HLA-A-202ENST00000376806 MRPL35Q9NZE8 188 aaKnown RBP12.15□□□□□ -0.46
HLA-A-202ENST00000376806 LINC01549A6NIU2 74 aa12.14□□□□□ -0.47
HLA-A-202ENST00000376806 RHOHQ15669 191 aa12.14□□□□□ -0.47
HLA-A-202ENST00000376806 SPATA3Q8NHX4 192 aa12.14□□□□□ -0.47
HLA-A-202ENST00000376806 C1QTNF4Q9BXJ3 329 aa12.14□□□□□ -0.47
HLA-A-202ENST00000376806 INSL3P51460 131 aa12.14□□□□□ -0.47
HLA-A-202ENST00000376806 C9orf66Q5T8R8 295 aa12.14□□□□□ -0.47
HLA-A-202ENST00000376806 NEXN-AS1Q8NBZ9 246 aa12.14□□□□□ -0.47
HLA-A-202ENST00000376806 I3L3M4 83 aa12.13□□□□□ -0.47
HLA-A-202ENST00000376806 TSHBP01222 138 aa12.13□□□□□ -0.47
HLA-A-202ENST00000376806 P0DMU3 169 aa12.13□□□□□ -0.47
HLA-A-202ENST00000376806 FAM231AP0DMU4 169 aa12.13□□□□□ -0.47
HLA-A-202ENST00000376806 FAM231CP0DMU5 169 aa12.13□□□□□ -0.47
HLA-A-202ENST00000376806 BATFQ16520 125 aa12.13□□□□□ -0.47
HLA-A-202ENST00000376806 BAALCQ8WXS3 180 aa12.13□□□□□ -0.47
HLA-A-202ENST00000376806 COL6A5A8TX70 2615 aa12.12□□□□□ -0.47
HLA-A-202ENST00000376806 TCTAP57738 103 aa12.12□□□□□ -0.47
HLA-A-202ENST00000376806 RPL39P62891 51 aaKnown RBP12.12□□□□□ -0.47
HLA-A-202ENST00000376806 HHLA3Q9XRX5 114 aa12.12□□□□□ -0.47
HLA-A-202ENST00000376806 TRGV1A0A0A0MS02 117 aa12.12□□□□□ -0.47
HLA-A-202ENST00000376806 F8VRH5 84 aa12.12□□□□□ -0.47
HLA-A-202ENST00000376806 FGF6P10767 208 aa12.12□□□□□ -0.47
HLA-A-202ENST00000376806 Q6ZSN1 163 aa12.12□□□□□ -0.47
HLA-A-202ENST00000376806 CSNK1G2-AS1Q8NCQ2 148 aa12.12□□□□□ -0.47
HLA-A-202ENST00000376806 A0A1B0GV90 55 aa12.11□□□□□ -0.47
HLA-A-202ENST00000376806 IGIPA6NJ69 53 aa12.11□□□□□ -0.47
HLA-A-202ENST00000376806 IGHV3-53P01767 116 aa12.11□□□□□ -0.47
HLA-A-202ENST00000376806 PLNP26678 52 aa12.11□□□□□ -0.47
HLA-A-202ENST00000376806 GTSCR1Q86UQ5 136 aa12.11□□□□□ -0.47
HLA-A-202ENST00000376806 C16orf74Q96GX8 76 aa12.11□□□□□ -0.47
HLA-A-202ENST00000376806 TIMM17AQ99595 171 aa12.1□□□□□ -0.47
HLA-A-202ENST00000376806 CHTOPQ9Y3Y2 248 aaKnown RBP12.1□□□□□ -0.47
HLA-A-202ENST00000376806 ZC2HC1BQ5TFG8 222 aa12.1□□□□□ -0.47
HLA-A-202ENST00000376806 TMEM141Q96I45 108 aa12.1□□□□□ -0.47
HLA-A-202ENST00000376806 TNFRSF18Q9Y5U5 241 aa12.1□□□□□ -0.47
HLA-A-202ENST00000376806 NMUP48645 174 aa12.09□□□□□ -0.47
HLA-A-202ENST00000376806 Q6ZTI0 123 aa12.09□□□□□ -0.47
HLA-A-202ENST00000376806 C2orf91Q6ZV80 131 aa12.09□□□□□ -0.47
HLA-A-202ENST00000376806 STAB1Q9NY15 2570 aa12.08□□□□□ -0.47
HLA-A-202ENST00000376806 PLAC8L1A1L4L8 177 aa12.08□□□□□ -0.48
HLA-A-202ENST00000376806 HINT1P49773 126 aaPredicted RBP12.08□□□□□ -0.48
HLA-A-202ENST00000376806 BOD1L2Q8IYS8 172 aa12.08□□□□□ -0.48
HLA-A-202ENST00000376806 OR4C5Q8NGB2 326 aa12.08□□□□□ -0.48
HLA-A-202ENST00000376806 PRSS29PA6NIE9 313 aa12.08□□□□□ -0.48
HLA-A-202ENST00000376806 DAZ2Q13117 558 aaKnown RBP12.08□□□□□ -0.48
HLA-A-202ENST00000376806 C20orf203Q8NBC4 194 aa12.08□□□□□ -0.48
HLA-A-202ENST00000376806 DNAJC30Q96LL9 226 aa12.08□□□□□ -0.48
HLA-A-202ENST00000376806 Q9UF83 564 aa12.08□□□□□ -0.48
HLA-A-202ENST00000376806 IGKV2D-26A0A0A0MRZ7 120 aa12.07□□□□□ -0.48
HLA-A-202ENST00000376806 NOP10Q9NPE3 64 aaKnown RBP12.07□□□□□ -0.48
HLA-A-202ENST00000376806 TRAV4A0A0B4J268 109 aa12.06□□□□□ -0.48
HLA-A-202ENST00000376806 DLEU1O43261 78 aa12.06□□□□□ -0.48
HLA-A-202ENST00000376806 RRN3P1Q2M238 152 aa12.06□□□□□ -0.48
HLA-A-202ENST00000376806 PCP2Q8IVA1 136 aa12.06□□□□□ -0.48
HLA-A-202ENST00000376806 ZNF479Q96JC4 524 aa12.06□□□□□ -0.48
HLA-A-202ENST00000376806 PMVKQ15126 192 aa12.05□□□□□ -0.48
HLA-A-202ENST00000376806 COL5A1-AS1Q5SY13 56 aa12.05□□□□□ -0.48
HLA-A-202ENST00000376806 VWFP04275 2813 aa12.05□□□□□ -0.48
HLA-A-202ENST00000376806 MPV17L2Q567V2 206 aa12.04□□□□□ -0.48
HLA-A-202ENST00000376806 MDFIQ99750 246 aa12.04□□□□□ -0.48
HLA-A-202ENST00000376806 IGLV4-69A0A075B6H9 119 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms