RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 NBL1P41271 181 aa11.22□□□□□ -0.61
UBQLN1-202ENST00000376395 PRIMA1Q86XR5 153 aa11.22□□□□□ -0.61
UBQLN1-202ENST00000376395 YAE1D1Q9NRH1 226 aa11.22□□□□□ -0.61
UBQLN1-202ENST00000376395 RNF223E7ERA6 249 aa11.22□□□□□ -0.61
UBQLN1-202ENST00000376395 IGHG4P01861 327 aa11.22□□□□□ -0.61
UBQLN1-202ENST00000376395 LMO4P61968 165 aa11.22□□□□□ -0.61
UBQLN1-202ENST00000376395 HIST2H2BDQ6DRA6 164 aa11.22□□□□□ -0.61
UBQLN1-202ENST00000376395 NRACQ8N912 160 aa11.22□□□□□ -0.61
UBQLN1-202ENST00000376395 Q8N1Y9 231 aa11.21□□□□□ -0.61
UBQLN1-202ENST00000376395 IGHV4-30-2A0A087WSY4 118 aa11.21□□□□□ -0.61
UBQLN1-202ENST00000376395 COPS9Q8WXC6 57 aa11.21□□□□□ -0.61
UBQLN1-202ENST00000376395 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.21□□□□□ -0.62
UBQLN1-202ENST00000376395 A0A1W2PPR1 153 aa11.21□□□□□ -0.62
UBQLN1-202ENST00000376395 IGKV2-29A2NJV5 120 aaPredicted RBP11.21□□□□□ -0.62
UBQLN1-202ENST00000376395 CEMP1Q6PRD7 247 aaPredicted RBP11.21□□□□□ -0.62
UBQLN1-202ENST00000376395 Q6ZS46 218 aa11.21□□□□□ -0.62
UBQLN1-202ENST00000376395 CLPSL1A2RUU4 121 aa11.2□□□□□ -0.62
UBQLN1-202ENST00000376395 DEFB112Q30KQ8 113 aa11.2□□□□□ -0.62
UBQLN1-202ENST00000376395 CHCHD5Q9BSY4 110 aa11.2□□□□□ -0.62
UBQLN1-202ENST00000376395 TRAV12-1A0A0B4J245 112 aa11.2□□□□□ -0.62
UBQLN1-202ENST00000376395 CFC1BP0CG36 223 aa11.2□□□□□ -0.62
UBQLN1-202ENST00000376395 CFC1P0CG37 223 aa11.2□□□□□ -0.62
UBQLN1-202ENST00000376395 CFHR3Q02985 330 aa11.2□□□□□ -0.62
UBQLN1-202ENST00000376395 C10orf99Q6UWK7 81 aa11.2□□□□□ -0.62
UBQLN1-202ENST00000376395 TRGV4A0A0C4DH28 118 aa11.2□□□□□ -0.62
UBQLN1-202ENST00000376395 EDN2P20800 178 aa11.2□□□□□ -0.62
UBQLN1-202ENST00000376395 LINC00158P58513 81 aa11.2□□□□□ -0.62
UBQLN1-202ENST00000376395 RPL36AP83881 106 aaKnown RBP11.2□□□□□ -0.62
UBQLN1-202ENST00000376395 ZFAND2AQ8N6M9 145 aa11.2□□□□□ -0.62
UBQLN1-202ENST00000376395 RPL36ALQ969Q0 106 aaKnown RBP11.2□□□□□ -0.62
UBQLN1-202ENST00000376395 C19orf84I3L1E1 186 aa11.19□□□□□ -0.62
UBQLN1-202ENST00000376395 FBXL19-AS1Q494R0 122 aa11.19□□□□□ -0.62
UBQLN1-202ENST00000376395 UFSP1Q6NVU6 142 aa11.19□□□□□ -0.62
UBQLN1-202ENST00000376395 ZNRF2Q8NHG8 242 aa11.19□□□□□ -0.62
UBQLN1-202ENST00000376395 ACANP16112 2415 aa11.19□□□□□ -0.62
UBQLN1-202ENST00000376395 MUSTN1Q8IVN3 82 aa11.19□□□□□ -0.62
UBQLN1-202ENST00000376395 TM2D2Q9BX73 214 aa11.19□□□□□ -0.62
UBQLN1-202ENST00000376395 P0DMU3 169 aa11.18□□□□□ -0.62
UBQLN1-202ENST00000376395 FAM231AP0DMU4 169 aa11.18□□□□□ -0.62
UBQLN1-202ENST00000376395 FAM231CP0DMU5 169 aa11.18□□□□□ -0.62
UBQLN1-202ENST00000376395 SCGB1A1P11684 91 aa11.18□□□□□ -0.62
UBQLN1-202ENST00000376395 DAND5Q8N907 189 aa11.18□□□□□ -0.62
UBQLN1-202ENST00000376395 C1QTNF4Q9BXJ3 329 aa11.18□□□□□ -0.62
UBQLN1-202ENST00000376395 PRM2P04554 102 aa11.18□□□□□ -0.62
UBQLN1-202ENST00000376395 RPL35AP18077 110 aaKnown RBP11.18□□□□□ -0.62
UBQLN1-202ENST00000376395 MORN3Q6PF18 240 aaPredicted RBP11.18□□□□□ -0.62
UBQLN1-202ENST00000376395 Q8N6K4 173 aa11.18□□□□□ -0.62
UBQLN1-202ENST00000376395 GAGE12JA6NER3 117 aa11.17□□□□□ -0.62
UBQLN1-202ENST00000376395 GAGE4Q13068 117 aa11.17□□□□□ -0.62
UBQLN1-202ENST00000376395 GAGE5Q13069 117 aa11.17□□□□□ -0.62
UBQLN1-202ENST00000376395 HOXD3P31249 432 aaPredicted RBP11.17□□□□□ -0.62
UBQLN1-202ENST00000376395 SRSF2Q01130 221 aaKnown RBP11.17□□□□□ -0.62
UBQLN1-202ENST00000376395 FOXI1Q12951 378 aa11.17□□□□□ -0.62
UBQLN1-202ENST00000376395 H3BMM0 161 aa11.16□□□□□ -0.62
UBQLN1-202ENST00000376395 UBE2WQ96B02 151 aa11.16□□□□□ -0.62
UBQLN1-202ENST00000376395 SPANXB1Q9NS25 103 aaPredicted RBP11.16□□□□□ -0.62
UBQLN1-202ENST00000376395 INSP01308 110 aa11.16□□□□□ -0.62
UBQLN1-202ENST00000376395 EBI3Q14213 229 aa11.16□□□□□ -0.62
UBQLN1-202ENST00000376395 LINC01356Q8N9X3 169 aa11.16□□□□□ -0.62
UBQLN1-202ENST00000376395 NEXN-AS1Q8NBZ9 246 aa11.16□□□□□ -0.62
UBQLN1-202ENST00000376395 APRG1Q8IVJ8 170 aa11.15□□□□□ -0.62
UBQLN1-202ENST00000376395 TNRC18O15417 2968 aaPredicted RBP11.15□□□□□ -0.62
UBQLN1-202ENST00000376395 TEN1Q86WV5 123 aa11.15□□□□□ -0.63
UBQLN1-202ENST00000376395 C11orf71Q6IPW1 123 aa11.14□□□□□ -0.63
UBQLN1-202ENST00000376395 PAX4O43316 350 aa11.14□□□□□ -0.63
UBQLN1-202ENST00000376395 ANKRD29Q8N6D5 301 aa11.14□□□□□ -0.63
UBQLN1-202ENST00000376395 SLURP1P55000 103 aa11.14□□□□□ -0.63
UBQLN1-202ENST00000376395 IGHG2P01859 326 aa11.13□□□□□ -0.63
UBQLN1-202ENST00000376395 HTN3P15516 51 aa11.13□□□□□ -0.63
UBQLN1-202ENST00000376395 RNASE3P12724 160 aaKnown RBP11.13□□□□□ -0.63
UBQLN1-202ENST00000376395 RHOHQ15669 191 aa11.13□□□□□ -0.63
UBQLN1-202ENST00000376395 NDUFA11Q86Y39 141 aa11.13□□□□□ -0.63
UBQLN1-202ENST00000376395 CARD19Q96LW7 228 aa11.13□□□□□ -0.63
UBQLN1-202ENST00000376395 TCL1BO95988 128 aa11.12□□□□□ -0.63
UBQLN1-202ENST00000376395 CNFNQ9BYD5 112 aa11.12□□□□□ -0.63
UBQLN1-202ENST00000376395 COL12A1Q99715 3063 aa11.12□□□□□ -0.63
UBQLN1-202ENST00000376395 H3BUA1 57 aa11.12□□□□□ -0.63
UBQLN1-202ENST00000376395 ZNF462Q96JM2 2506 aa11.12□□□□□ -0.63
UBQLN1-202ENST00000376395 LEPROTO15243 131 aa11.12□□□□□ -0.63
UBQLN1-202ENST00000376395 CRPP02741 224 aa11.11□□□□□ -0.63
UBQLN1-202ENST00000376395 PF4P02776 101 aa11.11□□□□□ -0.63
UBQLN1-202ENST00000376395 PROK1P58294 105 aa11.11□□□□□ -0.63
UBQLN1-202ENST00000376395 RHODO00212 210 aa11.11□□□□□ -0.63
UBQLN1-202ENST00000376395 DEFB130BP0DP73 79 aa11.11□□□□□ -0.63
UBQLN1-202ENST00000376395 DEFB130AP0DP74 79 aa11.11□□□□□ -0.63
UBQLN1-202ENST00000376395 NSUN5P1Q3KNT7 163 aa11.11□□□□□ -0.63
UBQLN1-202ENST00000376395 TIMM17AQ99595 171 aa11.11□□□□□ -0.63
UBQLN1-202ENST00000376395 IGHV4OR15-8A0A075B7B6 117 aa11.11□□□□□ -0.63
UBQLN1-202ENST00000376395 A0A087WW49 117 aa11.11□□□□□ -0.63
UBQLN1-202ENST00000376395 PFN2P35080 140 aa11.1□□□□□ -0.63
UBQLN1-202ENST00000376395 DSCR9P59020 149 aa11.1□□□□□ -0.63
UBQLN1-202ENST00000376395 MT-ATP8P03928 68 aa11.1□□□□□ -0.63
UBQLN1-202ENST00000376395 C15orf53Q8NAA6 179 aa11.1□□□□□ -0.63
UBQLN1-202ENST00000376395 C10orf105Q8TEF2 133 aa11.1□□□□□ -0.63
UBQLN1-202ENST00000376395 Q9H8V8 135 aa11.1□□□□□ -0.63
UBQLN1-202ENST00000376395 U3KQE9 123 aa11.1□□□□□ -0.63
UBQLN1-202ENST00000376395 EPG5Q9HCE0 2579 aa11.1□□□□□ -0.63
UBQLN1-202ENST00000376395 A8MZ25 164 aa11.1□□□□□ -0.63
UBQLN1-202ENST00000376395 B5MCH6 92 aa11.09□□□□□ -0.63
UBQLN1-202ENST00000376395 GAGE7O76087 117 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms