RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 UPK3BQ9BT76 320 aa10.35□□□□□ -0.75
HSPG2-201ENST00000374673 MRPS16Q9Y3D3 137 aaKnown RBP10.35□□□□□ -0.75
HSPG2-201ENST00000374673 SNAPINO95295 136 aa10.34□□□□□ -0.75
HSPG2-201ENST00000374673 S100A8P05109 93 aa10.34□□□□□ -0.75
HSPG2-201ENST00000374673 UBE2D3P61077 147 aa10.34□□□□□ -0.75
HSPG2-201ENST00000374673 UBE2D2P62837 147 aa10.34□□□□□ -0.75
HSPG2-201ENST00000374673 HBBP68871 147 aa10.34□□□□□ -0.75
HSPG2-201ENST00000374673 RASL11AQ6T310 242 aa10.34□□□□□ -0.75
HSPG2-201ENST00000374673 GATD1Q8NB37 220 aa10.34□□□□□ -0.75
HSPG2-201ENST00000374673 DNAJC30Q96LL9 226 aa10.34□□□□□ -0.75
HSPG2-201ENST00000374673 KMT2CQ8NEZ4 4911 aaKnown RBP10.33□□□□□ -0.76
HSPG2-201ENST00000374673 CAMPP49913 170 aa10.33□□□□□ -0.76
HSPG2-201ENST00000374673 KCNIP4Q6PIL6 250 aa10.33□□□□□ -0.76
HSPG2-201ENST00000374673 AMN1Q8IY45 258 aa10.33□□□□□ -0.76
HSPG2-201ENST00000374673 RNF185Q96GF1 192 aa10.33□□□□□ -0.76
HSPG2-201ENST00000374673 BTF3L4Q96K17 158 aa10.33□□□□□ -0.76
HSPG2-201ENST00000374673 GTSF1LQ9H1H1 148 aa10.33□□□□□ -0.76
HSPG2-201ENST00000374673 RPS10P5Q9NQ39 176 aa10.33□□□□□ -0.76
HSPG2-201ENST00000374673 DNAH1Q9P2D7 4330 aa10.32□□□□□ -0.76
HSPG2-201ENST00000374673 TRAV9-1A0A075B6T8 112 aa10.32□□□□□ -0.76
HSPG2-201ENST00000374673 RAB4AP20338 218 aa10.32□□□□□ -0.76
HSPG2-201ENST00000374673 NIT2Q9NQR4 276 aa10.32□□□□□ -0.76
HSPG2-201ENST00000374673 TRAV26-2A0A0B4J265 109 aa10.31□□□□□ -0.76
HSPG2-201ENST00000374673 FAM104BQ5XKR9 115 aa10.31□□□□□ -0.76
HSPG2-201ENST00000374673 MRAP2Q96G30 205 aa10.31□□□□□ -0.76
HSPG2-201ENST00000374673 TNFRSF18Q9Y5U5 241 aa10.31□□□□□ -0.76
HSPG2-201ENST00000374673 SACSQ9NZJ4 4579 aa10.31□□□□□ -0.76
HSPG2-201ENST00000374673 S100PP25815 95 aa10.3□□□□□ -0.76
HSPG2-201ENST00000374673 LELP1Q5T871 98 aa10.3□□□□□ -0.76
HSPG2-201ENST00000374673 VPS13DQ5THJ4 4388 aa10.3□□□□□ -0.76
HSPG2-201ENST00000374673 DAZ4Q86SG3 579 aaKnown RBP10.29□□□□□ -0.76
HSPG2-201ENST00000374673 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.29□□□□□ -0.76
HSPG2-201ENST00000374673 Q9H8V8 135 aa10.29□□□□□ -0.76
HSPG2-201ENST00000374673 DAZ3Q9NR90 486 aaKnown RBP10.29□□□□□ -0.76
HSPG2-201ENST00000374673 MRPL51Q4U2R6 128 aaKnown RBP10.28□□□□□ -0.76
HSPG2-201ENST00000374673 RPL39LQ96EH5 51 aaKnown RBP10.28□□□□□ -0.76
HSPG2-201ENST00000374673 HYDINQ4G0P3 5121 aa10.27□□□□□ -0.77
HSPG2-201ENST00000374673 IGHV3-38A0A0C4DH36 116 aa10.27□□□□□ -0.77
HSPG2-201ENST00000374673 TRBV6-5A0A0K0K1A5 114 aa10.27□□□□□ -0.77
HSPG2-201ENST00000374673 SIVA1O15304 175 aa10.27□□□□□ -0.77
HSPG2-201ENST00000374673 GAS8-AS1O95177 125 aa10.27□□□□□ -0.77
HSPG2-201ENST00000374673 TMEM97Q5BJF2 176 aa10.27□□□□□ -0.77
HSPG2-201ENST00000374673 OR10J3Q5JRS4 329 aa10.27□□□□□ -0.77
HSPG2-201ENST00000374673 WFDC10BQ8IUB3 73 aa10.27□□□□□ -0.77
HSPG2-201ENST00000374673 URGCP-MRPS24S4R325 110 aa10.27□□□□□ -0.77
HSPG2-201ENST00000374673 RYR2Q92736 4967 aa10.26□□□□□ -0.77
HSPG2-201ENST00000374673 TRAV8-6A0A0B4J262 113 aa10.26□□□□□ -0.77
HSPG2-201ENST00000374673 IGLV2-18A0A075B6J9 118 aa10.25□□□□□ -0.77
HSPG2-201ENST00000374673 NCR2O95944 276 aa10.25□□□□□ -0.77
HSPG2-201ENST00000374673 PPP1R17O96001 155 aa10.25□□□□□ -0.77
HSPG2-201ENST00000374673 RPS10P46783 165 aaKnown RBP10.25□□□□□ -0.77
HSPG2-201ENST00000374673 ATRAIDQ6UW56 229 aa10.25□□□□□ -0.77
HSPG2-201ENST00000374673 DNAH6Q9C0G6 4158 aa10.25□□□□□ -0.77
HSPG2-201ENST00000374673 KMT2AQ03164 3969 aa10.24□□□□□ -0.77
HSPG2-201ENST00000374673 TRBV6-8A0A0A6YYG3 113 aa10.24□□□□□ -0.77
HSPG2-201ENST00000374673 NBDYA0A0U1RRE5 68 aa10.24□□□□□ -0.77
HSPG2-201ENST00000374673 SDHAF1A6NFY7 115 aa10.24□□□□□ -0.77
HSPG2-201ENST00000374673 SMKR1H3BMG3 65 aa10.24□□□□□ -0.77
HSPG2-201ENST00000374673 DNAH10OSP0CZ25 163 aa10.24□□□□□ -0.77
HSPG2-201ENST00000374673 Q6ZR54 194 aa10.24□□□□□ -0.77
HSPG2-201ENST00000374673 TMEM136Q6ZRR5 245 aa10.24□□□□□ -0.77
HSPG2-201ENST00000374673 NRACQ8N912 160 aa10.24□□□□□ -0.77
HSPG2-201ENST00000374673 ST20Q9HBF5 79 aa10.24□□□□□ -0.77
HSPG2-201ENST00000374673 D6R8Y8 96 aa10.23□□□□□ -0.77
HSPG2-201ENST00000374673 PPBPP02775 128 aa10.23□□□□□ -0.77
HSPG2-201ENST00000374673 CKS2P33552 79 aa10.23□□□□□ -0.77
HSPG2-201ENST00000374673 COX19Q49B96 90 aa10.23□□□□□ -0.77
HSPG2-201ENST00000374673 TTC32Q5I0X7 151 aa10.23□□□□□ -0.77
HSPG2-201ENST00000374673 NTM-AS1Q6ZSK4 140 aa10.23□□□□□ -0.77
HSPG2-201ENST00000374673 TRBV24-1A0A075B6N3 115 aa10.22□□□□□ -0.77
HSPG2-201ENST00000374673 POLR2KP53803 58 aaKnown RBP10.22□□□□□ -0.77
HSPG2-201ENST00000374673 ELOBQ15370 118 aa10.22□□□□□ -0.77
HSPG2-201ENST00000374673 LINC01556Q5JQF7 62 aa10.22□□□□□ -0.77
HSPG2-201ENST00000374673 TMEM70Q9BUB7 260 aa10.22□□□□□ -0.77
HSPG2-201ENST00000374673 TRBV25-1A0A075B6N4 114 aa10.21□□□□□ -0.77
HSPG2-201ENST00000374673 K7EP13 123 aa10.21□□□□□ -0.77
HSPG2-201ENST00000374673 M0R2N4 97 aa10.21□□□□□ -0.77
HSPG2-201ENST00000374673 PHOX2AO14813 284 aa10.21□□□□□ -0.77
HSPG2-201ENST00000374673 HLA-DQA1P01909 254 aa10.21□□□□□ -0.77
HSPG2-201ENST00000374673 SUMO2P61956 95 aaKnown RBP10.21□□□□□ -0.77
HSPG2-201ENST00000374673 COTL1Q14019 142 aa10.21□□□□□ -0.77
HSPG2-201ENST00000374673 IQCJQ1A5X6 159 aa10.21□□□□□ -0.77
HSPG2-201ENST00000374673 ORMDL3Q8N138 153 aa10.21□□□□□ -0.77
HSPG2-201ENST00000374673 GNB1LQ9BYB4 327 aa10.21□□□□□ -0.77
HSPG2-201ENST00000374673 IGHV1-24A0A0C4DH33 117 aa10.2□□□□□ -0.78
HSPG2-201ENST00000374673 TRBV27A0A0K0K1C4 114 aa10.2□□□□□ -0.78
HSPG2-201ENST00000374673 I3L3M4 83 aa10.2□□□□□ -0.78
HSPG2-201ENST00000374673 TNFRSF6BO95407 300 aa10.2□□□□□ -0.78
HSPG2-201ENST00000374673 NIT1Q86X76 327 aa10.2□□□□□ -0.78
HSPG2-201ENST00000374673 C20orf78Q9BR46 151 aa10.2□□□□□ -0.78
HSPG2-201ENST00000374673 KRTAP1-5Q9BYS1 174 aa10.2□□□□□ -0.78
HSPG2-201ENST00000374673 TRAV9-2A0A087WT02 112 aa10.19□□□□□ -0.78
HSPG2-201ENST00000374673 TGIF2-C20orf24A0A0A6YYL0 155 aa10.19□□□□□ -0.78
HSPG2-201ENST00000374673 NPYP01303 97 aa10.19□□□□□ -0.78
HSPG2-201ENST00000374673 MT-ND6P03923 174 aa10.19□□□□□ -0.78
HSPG2-201ENST00000374673 PMCHP20382 165 aa10.19□□□□□ -0.78
HSPG2-201ENST00000374673 RPL32P62910 135 aaKnown RBP10.19□□□□□ -0.78
HSPG2-201ENST00000374673 PRELID3AQ96N28 172 aa10.19□□□□□ -0.78
HSPG2-201ENST00000374673 YPEL4Q96NS1 127 aa10.19□□□□□ -0.78
HSPG2-201ENST00000374673 CHCHD7Q9BUK0 85 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms