RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 TRBV6-4A0A1B0GX49 114 aa12.32□□□□□ -0.44
PFDN6-201ENST00000374606 M0QY20 66 aa12.32□□□□□ -0.44
PFDN6-201ENST00000374606 Q6ZSN1 163 aa12.32□□□□□ -0.44
PFDN6-201ENST00000374606 PRELID3AQ96N28 172 aa12.32□□□□□ -0.44
PFDN6-201ENST00000374606 PPP1R17O96001 155 aa12.31□□□□□ -0.44
PFDN6-201ENST00000374606 SRIP30626 198 aa12.31□□□□□ -0.44
PFDN6-201ENST00000374606 RHOHQ15669 191 aa12.31□□□□□ -0.44
PFDN6-201ENST00000374606 SLC25A29Q8N8R3 303 aa12.31□□□□□ -0.44
PFDN6-201ENST00000374606 PRO0255Q9UI72 69 aa12.31□□□□□ -0.44
PFDN6-201ENST00000374606 HHLA3Q9XRX5 114 aa12.31□□□□□ -0.44
PFDN6-201ENST00000374606 FRAS1Q86XX4 4008 aa12.3□□□□□ -0.44
PFDN6-201ENST00000374606 TRAV10A0A0B4J240 114 aa12.3□□□□□ -0.44
PFDN6-201ENST00000374606 GAS8-AS1O95177 125 aa12.3□□□□□ -0.44
PFDN6-201ENST00000374606 OR10J3Q5JRS4 329 aa12.3□□□□□ -0.44
PFDN6-201ENST00000374606 RPL39LQ96EH5 51 aaKnown RBP12.3□□□□□ -0.44
PFDN6-201ENST00000374606 PRADC1Q9BSG0 188 aa12.3□□□□□ -0.44
PFDN6-201ENST00000374606 ALKBH7Q9BT30 221 aaPredicted RBP12.3□□□□□ -0.44
PFDN6-201ENST00000374606 LAMTOR2Q9Y2Q5 125 aa12.3□□□□□ -0.44
PFDN6-201ENST00000374606 TRBV10-1A0A0K0K1A3 114 aa12.29□□□□□ -0.44
PFDN6-201ENST00000374606 C1orf196B1AJZ1 125 aa12.29□□□□□ -0.44
PFDN6-201ENST00000374606 PHOX2AO14813 284 aa12.29□□□□□ -0.44
PFDN6-201ENST00000374606 NPYP01303 97 aa12.29□□□□□ -0.44
PFDN6-201ENST00000374606 P0DMU3 169 aa12.29□□□□□ -0.44
PFDN6-201ENST00000374606 FAM231AP0DMU4 169 aa12.29□□□□□ -0.44
PFDN6-201ENST00000374606 FAM231CP0DMU5 169 aa12.29□□□□□ -0.44
PFDN6-201ENST00000374606 CRYBA4P53673 196 aa12.29□□□□□ -0.44
PFDN6-201ENST00000374606 NRACQ8N912 160 aa12.29□□□□□ -0.44
PFDN6-201ENST00000374606 DEFB131BA0A096LNP1 70 aa12.28□□□□□ -0.44
PFDN6-201ENST00000374606 TNFRSF6BO95407 300 aa12.28□□□□□ -0.44
PFDN6-201ENST00000374606 LINC00476Q8WZB0 136 aa12.28□□□□□ -0.44
PFDN6-201ENST00000374606 NIT2Q9NQR4 276 aa12.28□□□□□ -0.44
PFDN6-201ENST00000374606 TRAV26-1A0A087WT03 109 aa12.27□□□□□ -0.45
PFDN6-201ENST00000374606 PAX4O43316 350 aa12.27□□□□□ -0.45
PFDN6-201ENST00000374606 NEXN-AS1Q8NBZ9 246 aa12.27□□□□□ -0.45
PFDN6-201ENST00000374606 DNAJC30Q96LL9 226 aa12.27□□□□□ -0.45
PFDN6-201ENST00000374606 A0A0J9YY99 117 aa12.26□□□□□ -0.45
PFDN6-201ENST00000374606 TRBV6-5A0A0K0K1A5 114 aa12.26□□□□□ -0.45
PFDN6-201ENST00000374606 RPL36AP83881 106 aaKnown RBP12.26□□□□□ -0.45
PFDN6-201ENST00000374606 RPL36ALQ969Q0 106 aaKnown RBP12.26□□□□□ -0.45
PFDN6-201ENST00000374606 MAP1LC3AQ9H492 121 aa12.26□□□□□ -0.45
PFDN6-201ENST00000374606 ST20Q9HBF5 79 aa12.26□□□□□ -0.45
PFDN6-201ENST00000374606 TNFRSF18Q9Y5U5 241 aa12.26□□□□□ -0.45
PFDN6-201ENST00000374606 GAGE12JA6NER3 117 aa12.25□□□□□ -0.45
PFDN6-201ENST00000374606 GYPEP15421 78 aa12.25□□□□□ -0.45
PFDN6-201ENST00000374606 RAB5BP61020 215 aa12.25□□□□□ -0.45
PFDN6-201ENST00000374606 SUMO2P61956 95 aaKnown RBP12.25□□□□□ -0.45
PFDN6-201ENST00000374606 GAGE1Q13065 139 aa12.25□□□□□ -0.45
PFDN6-201ENST00000374606 GAGE4Q13068 117 aa12.25□□□□□ -0.45
PFDN6-201ENST00000374606 GAGE5Q13069 117 aa12.25□□□□□ -0.45
PFDN6-201ENST00000374606 GAGE13Q4V321 117 aa12.25□□□□□ -0.45
PFDN6-201ENST00000374606 C20orf78Q9BR46 151 aa12.25□□□□□ -0.45
PFDN6-201ENST00000374606 TRBV7-3A0A075B6L6 115 aa12.24□□□□□ -0.45
PFDN6-201ENST00000374606 LOC100131303A0A0U1RQF7 123 aa12.24□□□□□ -0.45
PFDN6-201ENST00000374606 ZNRF2Q8NHG8 242 aa12.24□□□□□ -0.45
PFDN6-201ENST00000374606 C18orf32Q8TCD1 76 aa12.24□□□□□ -0.45
PFDN6-201ENST00000374606 PHLDA1Q8WV24 401 aaPredicted RBP12.24□□□□□ -0.45
PFDN6-201ENST00000374606 VSIG2Q96IQ7 327 aa12.24□□□□□ -0.45
PFDN6-201ENST00000374606 Q9UF83 564 aa12.24□□□□□ -0.45
PFDN6-201ENST00000374606 SDHAF1A6NFY7 115 aa12.23□□□□□ -0.45
PFDN6-201ENST00000374606 HIST1H2BKO60814 126 aa12.23□□□□□ -0.45
PFDN6-201ENST00000374606 LY6G6CO95867 125 aa12.23□□□□□ -0.45
PFDN6-201ENST00000374606 HIST1H2BJP06899 126 aa12.23□□□□□ -0.45
PFDN6-201ENST00000374606 HIST1H2BOP23527 126 aa12.23□□□□□ -0.45
PFDN6-201ENST00000374606 HIST1H2BBP33778 126 aa12.23□□□□□ -0.45
PFDN6-201ENST00000374606 HIST1H2BDP58876 126 aa12.23□□□□□ -0.45
PFDN6-201ENST00000374606 HIST1H2BCP62807 126 aa12.23□□□□□ -0.45
PFDN6-201ENST00000374606 HIST2H2BEQ16778 126 aa12.23□□□□□ -0.45
PFDN6-201ENST00000374606 IQCJQ1A5X6 159 aa12.23□□□□□ -0.45
PFDN6-201ENST00000374606 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.23□□□□□ -0.45
PFDN6-201ENST00000374606 HIST1H2BHQ93079 126 aa12.23□□□□□ -0.45
PFDN6-201ENST00000374606 HIST1H2BNQ99877 126 aa12.23□□□□□ -0.45
PFDN6-201ENST00000374606 HIST1H2BMQ99879 126 aa12.23□□□□□ -0.45
PFDN6-201ENST00000374606 SMIM2Q9BVW6 85 aa12.23□□□□□ -0.45
PFDN6-201ENST00000374606 LOC389332A0A1B0GUA5 103 aa12.22□□□□□ -0.45
PFDN6-201ENST00000374606 H3BNG1 76 aa12.22□□□□□ -0.45
PFDN6-201ENST00000374606 PMCHP20382 165 aa12.22□□□□□ -0.45
PFDN6-201ENST00000374606 TMEM70Q9BUB7 260 aa12.22□□□□□ -0.45
PFDN6-201ENST00000374606 ICOSQ9Y6W8 199 aa12.22□□□□□ -0.45
PFDN6-201ENST00000374606 LINC00694P0DN24 101 aa12.21□□□□□ -0.45
PFDN6-201ENST00000374606 UBE2D3P61077 147 aa12.21□□□□□ -0.45
PFDN6-201ENST00000374606 UBE2D2P62837 147 aa12.21□□□□□ -0.45
PFDN6-201ENST00000374606 PCLOQ9Y6V0 5065 aa12.2□□□□□ -0.46
PFDN6-201ENST00000374606 PRSS47A8MTI9 375 aa12.2□□□□□ -0.46
PFDN6-201ENST00000374606 RPL32P62910 135 aaKnown RBP12.2□□□□□ -0.46
PFDN6-201ENST00000374606 MRPL23Q16540 153 aaKnown RBP12.2□□□□□ -0.46
PFDN6-201ENST00000374606 PRSS3P2Q8NHM4 247 aa12.2□□□□□ -0.46
PFDN6-201ENST00000374606 KMT2AQ03164 3969 aa12.2□□□□□ -0.46
PFDN6-201ENST00000374606 VCYO14598 125 aa12.19□□□□□ -0.46
PFDN6-201ENST00000374606 POLR2KP53803 58 aaKnown RBP12.19□□□□□ -0.46
PFDN6-201ENST00000374606 Q0VG73 95 aa12.19□□□□□ -0.46
PFDN6-201ENST00000374606 NEGR1Q7Z3B1 354 aa12.19□□□□□ -0.46
PFDN6-201ENST00000374606 DAZ4Q86SG3 579 aaKnown RBP12.19□□□□□ -0.46
PFDN6-201ENST00000374606 BAGE3Q86Y29 109 aa12.19□□□□□ -0.46
PFDN6-201ENST00000374606 NXT2Q9NPJ8 142 aaKnown RBP12.19□□□□□ -0.46
PFDN6-201ENST00000374606 DAZ3Q9NR90 486 aaKnown RBP12.19□□□□□ -0.46
PFDN6-201ENST00000374606 IGHV3-38A0A0C4DH36 116 aa12.18□□□□□ -0.46
PFDN6-201ENST00000374606 TRBV27A0A0K0K1C4 114 aa12.18□□□□□ -0.46
PFDN6-201ENST00000374606 NUPR2A6NF83 97 aa12.18□□□□□ -0.46
PFDN6-201ENST00000374606 I3L3M4 83 aa12.18□□□□□ -0.46
PFDN6-201ENST00000374606 IFI27P40305 119 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms