RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 SRSF2Q01130 221 aaKnown RBP13.05□□□□□ -0.32
LDLRAP1-201ENST00000374338 AGPAT4-IT1Q9H0P7 198 aa13.05□□□□□ -0.32
LDLRAP1-201ENST00000374338 H7C2G1 150 aa13.04□□□□□ -0.32
LDLRAP1-201ENST00000374338 HIST2H2BDQ6DRA6 164 aa13.04□□□□□ -0.32
LDLRAP1-201ENST00000374338 H3BUX3 64 aa13.04□□□□□ -0.32
LDLRAP1-201ENST00000374338 BAALCQ8WXS3 180 aa13.04□□□□□ -0.32
LDLRAP1-201ENST00000374338 RPL39LQ96EH5 51 aaKnown RBP13.04□□□□□ -0.32
LDLRAP1-201ENST00000374338 TOMM6Q96B49 74 aa13.03□□□□□ -0.32
LDLRAP1-201ENST00000374338 LGALS9O00182 355 aa13.03□□□□□ -0.32
LDLRAP1-201ENST00000374338 ELANEP08246 267 aa13.03□□□□□ -0.32
LDLRAP1-201ENST00000374338 LINC01620Q4KN68 170 aa13.03□□□□□ -0.32
LDLRAP1-201ENST00000374338 SPANXN1Q5VSR9 72 aa13.03□□□□□ -0.32
LDLRAP1-201ENST00000374338 AVPP01185 164 aa13.02□□□□□ -0.32
LDLRAP1-201ENST00000374338 C10orf99Q6UWK7 81 aa13.02□□□□□ -0.32
LDLRAP1-201ENST00000374338 CCL19Q99731 98 aa13.02□□□□□ -0.32
LDLRAP1-201ENST00000374338 TRAV41A0A0B4J266 112 aa13.02□□□□□ -0.33
LDLRAP1-201ENST00000374338 IGHV3-33P01772 117 aa13.02□□□□□ -0.33
LDLRAP1-201ENST00000374338 SMIM2Q9BVW6 85 aa13.02□□□□□ -0.33
LDLRAP1-201ENST00000374338 PRORYQ9H606 182 aa13.02□□□□□ -0.33
LDLRAP1-201ENST00000374338 EIF4EBP3O60516 100 aaPredicted RBP13.02□□□□□ -0.33
LDLRAP1-201ENST00000374338 SLC25A29Q8N8R3 303 aa13.02□□□□□ -0.33
LDLRAP1-201ENST00000374338 SMIM9A6NGZ8 99 aa13.01□□□□□ -0.33
LDLRAP1-201ENST00000374338 PF4V1P10720 104 aa13.01□□□□□ -0.33
LDLRAP1-201ENST00000374338 MRPL23Q16540 153 aaKnown RBP13.01□□□□□ -0.33
LDLRAP1-201ENST00000374338 C20orf173Q96LM9 149 aa13.01□□□□□ -0.33
LDLRAP1-201ENST00000374338 WNK1Q9H4A3 2382 aa13.01□□□□□ -0.33
LDLRAP1-201ENST00000374338 M0R381 172 aa13.01□□□□□ -0.33
LDLRAP1-201ENST00000374338 ZNF56Q15929 161 aa13.01□□□□□ -0.33
LDLRAP1-201ENST00000374338 PRR9Q5T870 116 aa13.01□□□□□ -0.33
LDLRAP1-201ENST00000374338 C16orf92Q96LL3 132 aa13.01□□□□□ -0.33
LDLRAP1-201ENST00000374338 OOSP1A8MZH6 123 aa13□□□□□ -0.33
LDLRAP1-201ENST00000374338 H3BMM0 161 aa13□□□□□ -0.33
LDLRAP1-201ENST00000374338 EEF1AKMT3Q96AZ1 226 aa13□□□□□ -0.33
LDLRAP1-201ENST00000374338 UBE2WQ96B02 151 aa13□□□□□ -0.33
LDLRAP1-201ENST00000374338 LINC01600Q96MT4 127 aa13□□□□□ -0.33
LDLRAP1-201ENST00000374338 P0DMU3 169 aa13□□□□□ -0.33
LDLRAP1-201ENST00000374338 FAM231AP0DMU4 169 aa13□□□□□ -0.33
LDLRAP1-201ENST00000374338 FAM231CP0DMU5 169 aa13□□□□□ -0.33
LDLRAP1-201ENST00000374338 METTL26Q96S19 204 aa13□□□□□ -0.33
LDLRAP1-201ENST00000374338 IGHV7-4-1A0A0J9YVY3 117 aa12.99□□□□□ -0.33
LDLRAP1-201ENST00000374338 ORMDL2Q53FV1 153 aa12.99□□□□□ -0.33
LDLRAP1-201ENST00000374338 A4D1N5 150 aa12.99□□□□□ -0.33
LDLRAP1-201ENST00000374338 ATXN8Q156A1 80 aa12.99□□□□□ -0.33
LDLRAP1-201ENST00000374338 IGHV1-69DA0A0B4J2H0 117 aa12.99□□□□□ -0.33
LDLRAP1-201ENST00000374338 IGHV1-69P01742 117 aa12.99□□□□□ -0.33
LDLRAP1-201ENST00000374338 TRBV10-2A0A0K0K1G8 114 aa12.98□□□□□ -0.33
LDLRAP1-201ENST00000374338 M0R2P5 195 aa12.98□□□□□ -0.33
LDLRAP1-201ENST00000374338 C11orf86A6NJI1 115 aa12.98□□□□□ -0.33
LDLRAP1-201ENST00000374338 TSPEAR-AS2P59090 65 aa12.98□□□□□ -0.33
LDLRAP1-201ENST00000374338 TMEM263Q8WUH6 116 aaKnown RBP12.98□□□□□ -0.33
LDLRAP1-201ENST00000374338 TRBV7-7A0A0K0K1E9 115 aa12.97□□□□□ -0.33
LDLRAP1-201ENST00000374338 C2orf66Q6UXQ4 117 aa12.97□□□□□ -0.33
LDLRAP1-201ENST00000374338 C14orf178Q8N769 122 aaPredicted RBP12.97□□□□□ -0.33
LDLRAP1-201ENST00000374338 FAM19A5Q7Z5A7 132 aaPredicted RBP12.96□□□□□ -0.33
LDLRAP1-201ENST00000374338 CHD6Q8TD26 2715 aa12.96□□□□□ -0.33
LDLRAP1-201ENST00000374338 NDUFA7O95182 113 aa12.96□□□□□ -0.33
LDLRAP1-201ENST00000374338 CRYGDP07320 174 aa12.96□□□□□ -0.33
LDLRAP1-201ENST00000374338 C9orf153Q5TBE3 101 aa12.96□□□□□ -0.33
LDLRAP1-201ENST00000374338 MOB4Q9Y3A3 225 aa12.96□□□□□ -0.33
LDLRAP1-201ENST00000374338 IGKV3-20P01619 116 aa12.95□□□□□ -0.34
LDLRAP1-201ENST00000374338 MGPP08493 103 aa12.95□□□□□ -0.34
LDLRAP1-201ENST00000374338 DUX5Q96PT3 197 aa12.95□□□□□ -0.34
LDLRAP1-201ENST00000374338 AKAP9Q99996 3911 aa12.95□□□□□ -0.34
LDLRAP1-201ENST00000374338 ACANP16112 2415 aa12.95□□□□□ -0.34
LDLRAP1-201ENST00000374338 FAM236AA0A1B0GUQ0 79 aa12.95□□□□□ -0.34
LDLRAP1-201ENST00000374338 FAM236BA0A1B0GV22 79 aa12.95□□□□□ -0.34
LDLRAP1-201ENST00000374338 HERVK_113P61574 105 aa12.95□□□□□ -0.34
LDLRAP1-201ENST00000374338 PIMREGQ9BSJ6 248 aa12.95□□□□□ -0.34
LDLRAP1-201ENST00000374338 BEX4Q9NWD9 120 aaPredicted RBP12.95□□□□□ -0.34
LDLRAP1-201ENST00000374338 TRGV11A0A075B6L2 103 aa12.94□□□□□ -0.34
LDLRAP1-201ENST00000374338 HERVK_113P63121 156 aa12.94□□□□□ -0.34
LDLRAP1-201ENST00000374338 DUX3Q96PT4 197 aa12.94□□□□□ -0.34
LDLRAP1-201ENST00000374338 IGLV4-69A0A075B6H9 119 aa12.94□□□□□ -0.34
LDLRAP1-201ENST00000374338 SUMO2P61956 95 aaKnown RBP12.94□□□□□ -0.34
LDLRAP1-201ENST00000374338 CEMP1Q6PRD7 247 aaPredicted RBP12.94□□□□□ -0.34
LDLRAP1-201ENST00000374338 C2orf82Q6UX34 121 aa12.94□□□□□ -0.34
LDLRAP1-201ENST00000374338 POM121L12Q8N7R1 296 aa12.94□□□□□ -0.34
LDLRAP1-201ENST00000374338 TRAV25A0A0B4J276 109 aa12.93□□□□□ -0.34
LDLRAP1-201ENST00000374338 Q1RN00 199 aa12.93□□□□□ -0.34
LDLRAP1-201ENST00000374338 C3orf22Q8N5N4 141 aa12.93□□□□□ -0.34
LDLRAP1-201ENST00000374338 AMELXQ99217 191 aa12.93□□□□□ -0.34
LDLRAP1-201ENST00000374338 KLK5Q9Y337 293 aaPredicted RBP12.93□□□□□ -0.34
LDLRAP1-201ENST00000374338 IGHV3-64A0A075B6Q5 118 aa12.93□□□□□ -0.34
LDLRAP1-201ENST00000374338 LRRC75A-AS1Q8N1F1 130 aa12.93□□□□□ -0.34
LDLRAP1-201ENST00000374338 MTORP42345 2549 aa12.93□□□□□ -0.34
LDLRAP1-201ENST00000374338 WIPF1O43516 503 aa12.92□□□□□ -0.34
LDLRAP1-201ENST00000374338 GPHB5Q86YW7 130 aa12.92□□□□□ -0.34
LDLRAP1-201ENST00000374338 A0A0B4J2C4 111 aa12.92□□□□□ -0.34
LDLRAP1-201ENST00000374338 C10orf105Q8TEF2 133 aa12.92□□□□□ -0.34
LDLRAP1-201ENST00000374338 TMEM101Q96IK0 257 aa12.92□□□□□ -0.34
LDLRAP1-201ENST00000374338 TRBV7-1A0A0A6YYK4 115 aa12.92□□□□□ -0.34
LDLRAP1-201ENST00000374338 FAM240AA0A1B0GVK7 77 aa12.92□□□□□ -0.34
LDLRAP1-201ENST00000374338 J3KT08 172 aa12.92□□□□□ -0.34
LDLRAP1-201ENST00000374338 RPL39P62891 51 aaKnown RBP12.92□□□□□ -0.34
LDLRAP1-201ENST00000374338 PMVKQ15126 192 aa12.91□□□□□ -0.34
LDLRAP1-201ENST00000374338 H7C423 109 aa12.91□□□□□ -0.34
LDLRAP1-201ENST00000374338 GNRH2O43555 120 aa12.91□□□□□ -0.34
LDLRAP1-201ENST00000374338 RNASE4P34096 147 aaKnown RBP12.91□□□□□ -0.34
LDLRAP1-201ENST00000374338 MUC4Q99102 2169 aa12.9□□□□□ -0.34
LDLRAP1-201ENST00000374338 IGHV4-59P01825 116 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms