RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 RAB37Q96AX2 223 aa11.73□□□□□ -0.53
CNKSR1-202ENST00000374253 TMEM86BQ8N661 226 aa11.72□□□□□ -0.53
CNKSR1-202ENST00000374253 KIR2DL4Q99706 377 aa11.72□□□□□ -0.53
CNKSR1-202ENST00000374253 Q9UF83 564 aa11.71□□□□□ -0.53
CNKSR1-202ENST00000374253 CYSLTR1Q9Y271 337 aa11.71□□□□□ -0.53
CNKSR1-202ENST00000374253 TRGV11A0A075B6L2 103 aa11.71□□□□□ -0.53
CNKSR1-202ENST00000374253 TRBV25-1A0A075B6N4 114 aa11.71□□□□□ -0.53
CNKSR1-202ENST00000374253 VCYO14598 125 aa11.71□□□□□ -0.53
CNKSR1-202ENST00000374253 GCSHP23434 173 aa11.71□□□□□ -0.53
CNKSR1-202ENST00000374253 AMMECR1LQ6DCA0 310 aa11.71□□□□□ -0.53
CNKSR1-202ENST00000374253 OPRPNQ99935 248 aaPredicted RBP11.71□□□□□ -0.53
CNKSR1-202ENST00000374253 IGHV3OR16-12A0A075B7B8 117 aa11.7□□□□□ -0.54
CNKSR1-202ENST00000374253 CCL24O00175 119 aa11.7□□□□□ -0.54
CNKSR1-202ENST00000374253 PLNP26678 52 aa11.7□□□□□ -0.54
CNKSR1-202ENST00000374253 HSD52Q0P140 79 aa11.7□□□□□ -0.54
CNKSR1-202ENST00000374253 UBE2V1Q13404 147 aa11.7□□□□□ -0.54
CNKSR1-202ENST00000374253 XCL2Q9UBD3 114 aa11.7□□□□□ -0.54
CNKSR1-202ENST00000374253 LINC01587Q99440 93 aa11.7□□□□□ -0.54
CNKSR1-202ENST00000374253 CHAC1Q9BUX1 264 aa11.7□□□□□ -0.54
CNKSR1-202ENST00000374253 C2CD3Q4AC94 2353 aa11.7□□□□□ -0.54
CNKSR1-202ENST00000374253 TRAV12-1A0A0B4J245 112 aa11.69□□□□□ -0.54
CNKSR1-202ENST00000374253 ODF3L2Q3SX64 289 aa11.69□□□□□ -0.54
CNKSR1-202ENST00000374253 LINC01006Q8NI28 216 aa11.69□□□□□ -0.54
CNKSR1-202ENST00000374253 FN1P02751 2386 aaKnown RBP11.69□□□□□ -0.54
CNKSR1-202ENST00000374253 FXYD2P54710 66 aa11.68□□□□□ -0.54
CNKSR1-202ENST00000374253 SIVA1O15304 175 aa11.68□□□□□ -0.54
CNKSR1-202ENST00000374253 OTOGQ6ZRI0 2925 aa11.68□□□□□ -0.54
CNKSR1-202ENST00000374253 TRBV27A0A0K0K1C4 114 aa11.67□□□□□ -0.54
CNKSR1-202ENST00000374253 IGIPA6NJ69 53 aa11.67□□□□□ -0.54
CNKSR1-202ENST00000374253 A6NJY4 79 aa11.67□□□□□ -0.54
CNKSR1-202ENST00000374253 SEC11AP67812 179 aa11.67□□□□□ -0.54
CNKSR1-202ENST00000374253 K7ERJ3 54 aa11.67□□□□□ -0.54
CNKSR1-202ENST00000374253 MRPL16Q9NX20 251 aaKnown RBP11.67□□□□□ -0.54
CNKSR1-202ENST00000374253 Q6ZSN1 163 aa11.66□□□□□ -0.54
CNKSR1-202ENST00000374253 SPAG8Q99932 426 aaPredicted RBP11.66□□□□□ -0.54
CNKSR1-202ENST00000374253 C11orf86A6NJI1 115 aa11.66□□□□□ -0.54
CNKSR1-202ENST00000374253 TRPT1Q86TN4 253 aaKnown RBP11.66□□□□□ -0.54
CNKSR1-202ENST00000374253 JMJD8Q96S16 334 aa11.66□□□□□ -0.54
CNKSR1-202ENST00000374253 TRBV6-5A0A0K0K1A5 114 aa11.65□□□□□ -0.54
CNKSR1-202ENST00000374253 A6NDN8 102 aa11.65□□□□□ -0.54
CNKSR1-202ENST00000374253 H3BUT2 72 aa11.65□□□□□ -0.54
CNKSR1-202ENST00000374253 AZU1P20160 251 aa11.65□□□□□ -0.54
CNKSR1-202ENST00000374253 OR4C5Q8NGB2 326 aa11.65□□□□□ -0.54
CNKSR1-202ENST00000374253 WFDC10AQ9H1F0 79 aa11.65□□□□□ -0.54
CNKSR1-202ENST00000374253 OR11H12B2RN74 326 aa11.65□□□□□ -0.54
CNKSR1-202ENST00000374253 FHL3Q13643 280 aa11.65□□□□□ -0.54
CNKSR1-202ENST00000374253 OR11H2Q8NH07 326 aa11.65□□□□□ -0.54
CNKSR1-202ENST00000374253 IGLV4-69A0A075B6H9 119 aa11.64□□□□□ -0.55
CNKSR1-202ENST00000374253 A8MTW9 85 aa11.64□□□□□ -0.55
CNKSR1-202ENST00000374253 RPL32P62910 135 aaKnown RBP11.64□□□□□ -0.55
CNKSR1-202ENST00000374253 NSUN5P1Q3KNT7 163 aa11.64□□□□□ -0.55
CNKSR1-202ENST00000374253 TEX29Q8N6K0 151 aa11.64□□□□□ -0.55
CNKSR1-202ENST00000374253 PRADC1Q9BSG0 188 aa11.64□□□□□ -0.55
CNKSR1-202ENST00000374253 VWFP04275 2813 aa11.64□□□□□ -0.55
CNKSR1-202ENST00000374253 TRAV2A0A0B4J234 112 aa11.63□□□□□ -0.55
CNKSR1-202ENST00000374253 STHQ8IWL8 128 aa11.63□□□□□ -0.55
CNKSR1-202ENST00000374253 CST9LQ9H4G1 147 aa11.63□□□□□ -0.55
CNKSR1-202ENST00000374253 M0R2P5 195 aa11.63□□□□□ -0.55
CNKSR1-202ENST00000374253 SAP30O75446 220 aa11.63□□□□□ -0.55
CNKSR1-202ENST00000374253 INSP01308 110 aa11.63□□□□□ -0.55
CNKSR1-202ENST00000374253 ZNF415Q09FC8 603 aa11.62□□□□□ -0.55
CNKSR1-202ENST00000374253 PMVKQ15126 192 aa11.62□□□□□ -0.55
CNKSR1-202ENST00000374253 CEMP1Q6PRD7 247 aaPredicted RBP11.62□□□□□ -0.55
CNKSR1-202ENST00000374253 RNASE1P07998 156 aaKnown RBP11.62□□□□□ -0.55
CNKSR1-202ENST00000374253 RIPPLY3P57055 190 aa11.62□□□□□ -0.55
CNKSR1-202ENST00000374253 C11orf72Q8NBR9 251 aa11.62□□□□□ -0.55
CNKSR1-202ENST00000374253 ZNRF2Q8NHG8 242 aa11.62□□□□□ -0.55
CNKSR1-202ENST00000374253 NHP2Q9NX24 153 aaKnown RBP11.62□□□□□ -0.55
CNKSR1-202ENST00000374253 HIGD1BQ9P298 99 aa11.62□□□□□ -0.55
CNKSR1-202ENST00000374253 TSSC4Q9Y5U2 329 aaPredicted RBP11.62□□□□□ -0.55
CNKSR1-202ENST00000374253 IGHV3-38A0A0C4DH36 116 aa11.61□□□□□ -0.55
CNKSR1-202ENST00000374253 I3L3M4 83 aa11.61□□□□□ -0.55
CNKSR1-202ENST00000374253 TMEM170BQ5T4T1 132 aa11.61□□□□□ -0.55
CNKSR1-202ENST00000374253 H3BRM9 83 aa11.61□□□□□ -0.55
CNKSR1-202ENST00000374253 RNASE13Q5GAN3 156 aaKnown RBP11.61□□□□□ -0.55
CNKSR1-202ENST00000374253 CFAP126Q5VTH2 177 aa11.61□□□□□ -0.55
CNKSR1-202ENST00000374253 CFAP161Q6P656 301 aa11.61□□□□□ -0.55
CNKSR1-202ENST00000374253 MYMXA0A1B0GTQ4 84 aa11.6□□□□□ -0.55
CNKSR1-202ENST00000374253 HIST1H4GQ99525 98 aa11.6□□□□□ -0.55
CNKSR1-202ENST00000374253 C9orf118A6NHY6 69 aa11.6□□□□□ -0.55
CNKSR1-202ENST00000374253 CEND1Q8N111 149 aa11.6□□□□□ -0.55
CNKSR1-202ENST00000374253 PHLDA1Q8WV24 401 aaPredicted RBP11.6□□□□□ -0.55
CNKSR1-202ENST00000374253 PLEKHB2Q96CS7 222 aa11.6□□□□□ -0.55
CNKSR1-202ENST00000374253 TIMM17AQ99595 171 aa11.6□□□□□ -0.55
CNKSR1-202ENST00000374253 ZNF815PA8K554 130 aa11.59□□□□□ -0.55
CNKSR1-202ENST00000374253 C1orf158Q8N1D5 194 aa11.59□□□□□ -0.55
CNKSR1-202ENST00000374253 C20orf203Q8NBC4 194 aa11.59□□□□□ -0.55
CNKSR1-202ENST00000374253 NBEAL2Q6ZNJ1 2754 aa11.59□□□□□ -0.55
CNKSR1-202ENST00000374253 IGHV3-64A0A075B6Q5 118 aa11.59□□□□□ -0.55
CNKSR1-202ENST00000374253 E9PLD3 99 aa11.59□□□□□ -0.55
CNKSR1-202ENST00000374253 SCGB2A2Q13296 93 aa11.59□□□□□ -0.55
CNKSR1-202ENST00000374253 UFSP1Q6NVU6 142 aa11.59□□□□□ -0.55
CNKSR1-202ENST00000374253 TMEM141Q96I45 108 aa11.59□□□□□ -0.55
CNKSR1-202ENST00000374253 TNFRSF18Q9Y5U5 241 aa11.59□□□□□ -0.55
CNKSR1-202ENST00000374253 A8MWV9 139 aa11.58□□□□□ -0.56
CNKSR1-202ENST00000374253 IGHV3-53P01767 116 aa11.58□□□□□ -0.56
CNKSR1-202ENST00000374253 TENM1Q9UKZ4 2725 aa11.57□□□□□ -0.56
CNKSR1-202ENST00000374253 SMIM13P0DJ93 91 aa11.57□□□□□ -0.56
CNKSR1-202ENST00000374253 RPL35AP18077 110 aaKnown RBP11.57□□□□□ -0.56
CNKSR1-202ENST00000374253 TSPEAR-AS2P59090 65 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms