RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 C2orf66Q6UXQ4 117 aa9.86□□□□□ -0.83
A1CF-204ENST00000373997 C14orf178Q8N769 122 aaPredicted RBP9.86□□□□□ -0.83
A1CF-204ENST00000373997 AGRNO00468 2067 aa9.86□□□□□ -0.83
A1CF-204ENST00000373997 SORL1Q92673 2214 aa9.86□□□□□ -0.83
A1CF-204ENST00000373997 F6UB75 175 aa9.86□□□□□ -0.83
A1CF-204ENST00000373997 DCANP1Q8TF63 244 aa9.86□□□□□ -0.83
A1CF-204ENST00000373997 BAALCQ8WXS3 180 aa9.86□□□□□ -0.83
A1CF-204ENST00000373997 RPL39LQ96EH5 51 aaKnown RBP9.86□□□□□ -0.83
A1CF-204ENST00000373997 BAHCC1Q9P281 2608 aa9.85□□□□□ -0.83
A1CF-204ENST00000373997 MGPP08493 103 aa9.85□□□□□ -0.83
A1CF-204ENST00000373997 RPL24P83731 157 aaKnown RBP9.85□□□□□ -0.83
A1CF-204ENST00000373997 PEMTQ9UBM1 199 aa9.85□□□□□ -0.83
A1CF-204ENST00000373997 TSSC4Q9Y5U2 329 aaPredicted RBP9.85□□□□□ -0.83
A1CF-204ENST00000373997 F8P00451 2351 aa9.85□□□□□ -0.83
A1CF-204ENST00000373997 ZNF688P0C7X2 276 aa9.85□□□□□ -0.83
A1CF-204ENST00000373997 RNASE4P34096 147 aaKnown RBP9.85□□□□□ -0.83
A1CF-204ENST00000373997 ID1P41134 155 aa9.85□□□□□ -0.83
A1CF-204ENST00000373997 RRN3P1Q2M238 152 aa9.85□□□□□ -0.83
A1CF-204ENST00000373997 TEX48A0A1B0GUV7 120 aa9.84□□□□□ -0.83
A1CF-204ENST00000373997 RNASE3P12724 160 aaKnown RBP9.84□□□□□ -0.83
A1CF-204ENST00000373997 SAMD13Q5VXD3 122 aa9.84□□□□□ -0.83
A1CF-204ENST00000373997 PRSS29PA6NIE9 313 aa9.83□□□□□ -0.84
A1CF-204ENST00000373997 J3QR89 54 aa9.83□□□□□ -0.84
A1CF-204ENST00000373997 CCL24O00175 119 aa9.83□□□□□ -0.84
A1CF-204ENST00000373997 PROK1P58294 105 aa9.83□□□□□ -0.84
A1CF-204ENST00000373997 PAPPA-AS1Q5QFB9 102 aa9.83□□□□□ -0.84
A1CF-204ENST00000373997 WFDC12Q8WWY7 111 aa9.83□□□□□ -0.84
A1CF-204ENST00000373997 C2CD3Q4AC94 2353 aa9.83□□□□□ -0.84
A1CF-204ENST00000373997 CRLF1O75462 422 aa9.83□□□□□ -0.84
A1CF-204ENST00000373997 DYNLRB2Q8TF09 96 aa9.83□□□□□ -0.84
A1CF-204ENST00000373997 PRADC1Q9BSG0 188 aa9.83□□□□□ -0.84
A1CF-204ENST00000373997 K7EQG2 157 aa9.82□□□□□ -0.84
A1CF-204ENST00000373997 NSUN5P1Q3KNT7 163 aa9.82□□□□□ -0.84
A1CF-204ENST00000373997 CYSLTR1Q9Y271 337 aa9.82□□□□□ -0.84
A1CF-204ENST00000373997 KIF25-AS1Q9Y6Z4 181 aa9.82□□□□□ -0.84
A1CF-204ENST00000373997 KLLNB2CW77 178 aa9.82□□□□□ -0.84
A1CF-204ENST00000373997 GNRH2O43555 120 aa9.82□□□□□ -0.84
A1CF-204ENST00000373997 FHL3Q13643 280 aa9.82□□□□□ -0.84
A1CF-204ENST00000373997 SPANXB1Q9NS25 103 aaPredicted RBP9.82□□□□□ -0.84
A1CF-204ENST00000373997 SPRY2O43597 315 aa9.81□□□□□ -0.84
A1CF-204ENST00000373997 LINC00315P59091 139 aa9.81□□□□□ -0.84
A1CF-204ENST00000373997 SNRPD3P62318 126 aaKnown RBP9.81□□□□□ -0.84
A1CF-204ENST00000373997 ZNF815PA8K554 130 aa9.8□□□□□ -0.84
A1CF-204ENST00000373997 TMEM238C9JI98 176 aa9.8□□□□□ -0.84
A1CF-204ENST00000373997 HERVK_113P61574 105 aa9.8□□□□□ -0.84
A1CF-204ENST00000373997 TMEM141Q96I45 108 aa9.8□□□□□ -0.84
A1CF-204ENST00000373997 KRTAP10-3P60369 221 aa9.8□□□□□ -0.84
A1CF-204ENST00000373997 WFDC2Q14508 124 aa9.8□□□□□ -0.84
A1CF-204ENST00000373997 GAGE13Q4V321 117 aa9.8□□□□□ -0.84
A1CF-204ENST00000373997 FAM159AQ6UWV7 190 aa9.8□□□□□ -0.84
A1CF-204ENST00000373997 TMEM61Q8N0U2 210 aa9.8□□□□□ -0.84
A1CF-204ENST00000373997 H3BMG7 143 aa9.79□□□□□ -0.84
A1CF-204ENST00000373997 VCYO14598 125 aa9.79□□□□□ -0.84
A1CF-204ENST00000373997 POLR2KP53803 58 aaKnown RBP9.79□□□□□ -0.84
A1CF-204ENST00000373997 IGIPA6NJ69 53 aa9.79□□□□□ -0.84
A1CF-204ENST00000373997 ADARB2-AS1A8MUL3 147 aa9.79□□□□□ -0.84
A1CF-204ENST00000373997 PMVKQ15126 192 aa9.79□□□□□ -0.84
A1CF-204ENST00000373997 TIMM17AQ99595 171 aa9.79□□□□□ -0.84
A1CF-204ENST00000373997 DUSP14O95147 198 aaKnown RBP9.78□□□□□ -0.84
A1CF-204ENST00000373997 IGKV3-20P01619 116 aa9.78□□□□□ -0.84
A1CF-204ENST00000373997 CRYGDP07320 174 aa9.78□□□□□ -0.84
A1CF-204ENST00000373997 SCGB1A1P11684 91 aa9.78□□□□□ -0.84
A1CF-204ENST00000373997 MORN3Q6PF18 240 aaPredicted RBP9.78□□□□□ -0.84
A1CF-204ENST00000373997 SCGB1D4Q6XE38 83 aa9.78□□□□□ -0.84
A1CF-204ENST00000373997 ZFP2Q6ZN57 461 aa9.78□□□□□ -0.84
A1CF-204ENST00000373997 ODF3Q96PU9 254 aa9.78□□□□□ -0.84
A1CF-204ENST00000373997 KIR2DL4Q99706 377 aa9.78□□□□□ -0.84
A1CF-204ENST00000373997 PRO0461Q9UI25 63 aa9.78□□□□□ -0.84
A1CF-204ENST00000373997 TP53TG1Q9Y2A0 90 aa9.78□□□□□ -0.84
A1CF-204ENST00000373997 UBE2D1P51668 147 aa9.77□□□□□ -0.84
A1CF-204ENST00000373997 DEFB114Q30KQ6 69 aa9.77□□□□□ -0.84
A1CF-204ENST00000373997 CD300EQ496F6 205 aaPredicted RBP9.77□□□□□ -0.84
A1CF-204ENST00000373997 SUMO4Q6EEV6 95 aa9.77□□□□□ -0.84
A1CF-204ENST00000373997 IGLV4-69A0A075B6H9 119 aa9.77□□□□□ -0.85
A1CF-204ENST00000373997 TRBV6-5A0A0K0K1A5 114 aa9.77□□□□□ -0.85
A1CF-204ENST00000373997 TSHBP01222 138 aa9.77□□□□□ -0.85
A1CF-204ENST00000373997 A0A0J9YX75 114 aa9.76□□□□□ -0.85
A1CF-204ENST00000373997 C11orf86A6NJI1 115 aa9.76□□□□□ -0.85
A1CF-204ENST00000373997 SRSF9Q13242 221 aaKnown RBP eCLIP9.76□□□□□ -0.85
A1CF-204ENST00000373997 AMTNQ6UX39 209 aa9.76□□□□□ -0.85
A1CF-204ENST00000373997 SIGMAR1Q99720 223 aa9.76□□□□□ -0.85
A1CF-204ENST00000373997 PGPEP1Q9NXJ5 209 aa9.76□□□□□ -0.85
A1CF-204ENST00000373997 TRBV27A0A0K0K1C4 114 aa9.76□□□□□ -0.85
A1CF-204ENST00000373997 CYSRT1A8MQ03 144 aa9.76□□□□□ -0.85
A1CF-204ENST00000373997 LYRM7Q5U5X0 104 aa9.76□□□□□ -0.85
A1CF-204ENST00000373997 MRPL16Q9NX20 251 aaKnown RBP9.76□□□□□ -0.85
A1CF-204ENST00000373997 DEFB131AP59861 70 aa9.75□□□□□ -0.85
A1CF-204ENST00000373997 ETDBQ3ZM63 59 aa9.75□□□□□ -0.85
A1CF-204ENST00000373997 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.75□□□□□ -0.85
A1CF-204ENST00000373997 PLEKHB2Q96CS7 222 aa9.75□□□□□ -0.85
A1CF-204ENST00000373997 GAGE12HA6NDE8 117 aa9.74□□□□□ -0.85
A1CF-204ENST00000373997 KNCNA6PVL3 124 aa9.74□□□□□ -0.85
A1CF-204ENST00000373997 CD7P09564 240 aa9.74□□□□□ -0.85
A1CF-204ENST00000373997 NDUFA11Q86Y39 141 aa9.74□□□□□ -0.85
A1CF-204ENST00000373997 C9orf85Q96MD7 179 aa9.74□□□□□ -0.85
A1CF-204ENST00000373997 SPATA25Q9BR10 227 aa9.74□□□□□ -0.85
A1CF-204ENST00000373997 A0A0J9YY99 117 aa9.74□□□□□ -0.85
A1CF-204ENST00000373997 SDHAF1A6NFY7 115 aa9.74□□□□□ -0.85
A1CF-204ENST00000373997 SYT8Q8NBV8 401 aa9.74□□□□□ -0.85
A1CF-204ENST00000373997 SPAG8Q99932 426 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 253 ms